RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 TATDN1Q6P1N9 297 aa15.12■□□□□ 0.01
COL6A1-205ENST00000492851 MIGA1Q8NAN2 632 aa15.12■□□□□ 0.01
COL6A1-205ENST00000492851 ASCC2Q9H1I8 757 aaPredicted RBP15.12■□□□□ 0.01
COL6A1-205ENST00000492851 IL1RAPL2Q9NP60 686 aa15.12■□□□□ 0.01
COL6A1-205ENST00000492851 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.12■□□□□ 0.01
COL6A1-205ENST00000492851 SAP30BPQ9UHR5 308 aaKnown RBP15.12■□□□□ 0.01
COL6A1-205ENST00000492851 GABRQQ9UN88 632 aa15.12■□□□□ 0.01
COL6A1-205ENST00000492851 MAGEB6P1A0A0J9YX57 407 aa15.11■□□□□ 0.01
COL6A1-205ENST00000492851 MTMR2Q13614 643 aa15.11■□□□□ 0.01
COL6A1-205ENST00000492851 MTFR1Q15390 333 aa15.11■□□□□ 0.01
COL6A1-205ENST00000492851 SLC9C2Q5TAH2 1124 aa15.11■□□□□ 0.01
COL6A1-205ENST00000492851 ANTXR1Q9H6X2 564 aa15.11■□□□□ 0.01
COL6A1-205ENST00000492851 MORF4L1Q9UBU8 362 aa15.11■□□□□ 0.01
COL6A1-205ENST00000492851 ZBTB21Q9ULJ3 1066 aa15.11■□□□□ 0.01
COL6A1-205ENST00000492851 PDE4DIPQ5VU43 2346 aa15.11■□□□□ 0.01
COL6A1-205ENST00000492851 MAST2Q6P0Q8 1798 aa15.11■□□□□ 0.01
COL6A1-205ENST00000492851 USP14P54578 494 aa15.1■□□□□ 0.01
COL6A1-205ENST00000492851 CERKLQ49MI3 558 aaPredicted RBP15.1■□□□□ 0.01
COL6A1-205ENST00000492851 USP17L2Q6R6M4 530 aa15.1■□□□□ 0.01
COL6A1-205ENST00000492851 GPRC5AQ8NFJ5 357 aa15.1■□□□□ 0.01
COL6A1-205ENST00000492851 CRNKL1Q9BZJ0 848 aaKnown RBP15.1■□□□□ 0.01
COL6A1-205ENST00000492851 DNAJC18Q9H819 358 aa15.1■□□□□ 0.01
COL6A1-205ENST00000492851 CABP5Q9NP86 173 aa15.1■□□□□ 0.01
COL6A1-205ENST00000492851 PCDH10Q9P2E7 1040 aa15.1■□□□□ 0.01
COL6A1-205ENST00000492851 GDF11O95390 407 aa15.09■□□□□ 0.01
COL6A1-205ENST00000492851 SGPL1O95470 568 aa15.09■□□□□ 0.01
COL6A1-205ENST00000492851 POLR3DP05423 398 aaPredicted RBP15.09■□□□□ 0.01
COL6A1-205ENST00000492851 CCAR1Q8IX12 1150 aaKnown RBP15.09■□□□□ 0.01
COL6A1-205ENST00000492851 RIOK1Q9BRS2 568 aaKnown RBP15.09■□□□□ 0.01
COL6A1-205ENST00000492851 HTATIP2Q9BUP3 242 aa15.09■□□□□ 0.01
COL6A1-205ENST00000492851 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.09■□□□□ 0.01
COL6A1-205ENST00000492851 APBB1O00213 710 aa15.08■□□□□ 0
COL6A1-205ENST00000492851 GH2P01242 217 aa15.08■□□□□ 0
COL6A1-205ENST00000492851 PDE6AP16499 860 aa15.08■□□□□ 0
COL6A1-205ENST00000492851 ATP5JP18859 108 aa15.08■□□□□ 0
COL6A1-205ENST00000492851 ABCB5Q2M3G0 1257 aa15.08■□□□□ 0
COL6A1-205ENST00000492851 SIRT2Q8IXJ6 389 aa15.08■□□□□ 0
COL6A1-205ENST00000492851 U2AF1L4Q8WU68 220 aaKnown RBP15.08■□□□□ 0
COL6A1-205ENST00000492851 P2RX7Q99572 595 aaKnown RBP15.08■□□□□ 0
COL6A1-205ENST00000492851 NDUFB9Q9Y6M9 179 aa15.08■□□□□ 0
COL6A1-205ENST00000492851 PHIPQ8WWQ0 1821 aa15.08■□□□□ 0
COL6A1-205ENST00000492851 GOLIM4O00461 696 aa15.07■□□□□ 0
COL6A1-205ENST00000492851 INHAP05111 366 aa15.07■□□□□ 0
COL6A1-205ENST00000492851 MAPK4P31152 587 aa15.07■□□□□ 0
COL6A1-205ENST00000492851 HERVK_113P62684 666 aa15.07■□□□□ 0
COL6A1-205ENST00000492851 TRMT44Q8IYL2 757 aaKnown RBP15.07■□□□□ 0
COL6A1-205ENST00000492851 DPF3Q92784 378 aa15.07■□□□□ 0
COL6A1-205ENST00000492851 C12orf42Q96LP6 360 aa15.07■□□□□ 0
COL6A1-205ENST00000492851 DNAJC2Q99543 621 aaKnown RBP15.07■□□□□ 0
COL6A1-205ENST00000492851 FEZ1Q99689 392 aa15.07■□□□□ 0
COL6A1-205ENST00000492851 ZNF532Q9HCE3 1301 aa15.07■□□□□ 0
COL6A1-205ENST00000492851 USP17L15C9J2P7 530 aa15.06■□□□□ 0
COL6A1-205ENST00000492851 USP17L13C9JLJ4 530 aa15.06■□□□□ 0
COL6A1-205ENST00000492851 USP17L11C9JVI0 530 aa15.06■□□□□ 0
COL6A1-205ENST00000492851 USP17L18D6R9N7 530 aa15.06■□□□□ 0
COL6A1-205ENST00000492851 USP17L22D6RA61 530 aa15.06■□□□□ 0
COL6A1-205ENST00000492851 USP17L17D6RBQ6 530 aa15.06■□□□□ 0
COL6A1-205ENST00000492851 USP17L19D6RCP7 530 aa15.06■□□□□ 0
COL6A1-205ENST00000492851 USP17L20D6RJB6 530 aa15.06■□□□□ 0
COL6A1-205ENST00000492851 TFRCP02786 760 aaKnown RBP15.06■□□□□ 0
COL6A1-205ENST00000492851 ELNP15502 786 aa15.06■□□□□ 0
COL6A1-205ENST00000492851 JAG1P78504 1218 aa15.06■□□□□ 0
COL6A1-205ENST00000492851 USP17L24Q0WX57 530 aa15.06■□□□□ 0
COL6A1-205ENST00000492851 RAB3GAP1Q15042 981 aa15.06■□□□□ 0
COL6A1-205ENST00000492851 ZSCAN25Q6NSZ9 544 aa15.06■□□□□ 0
COL6A1-205ENST00000492851 AMOTL1Q8IY63 956 aa15.06■□□□□ 0
COL6A1-205ENST00000492851 SOCS4Q8WXH5 440 aa15.06■□□□□ 0
COL6A1-205ENST00000492851 DDRGK1Q96HY6 314 aa15.06■□□□□ 0
COL6A1-205ENST00000492851 LRRCC1Q9C099 1032 aa15.06■□□□□ 0
COL6A1-205ENST00000492851 KIAA1683Q9H0B3 1180 aa15.06■□□□□ 0
COL6A1-205ENST00000492851 UNC93B1Q9H1C4 597 aa15.06■□□□□ 0
COL6A1-205ENST00000492851 EMILIN3Q9NT22 766 aa15.06■□□□□ 0
COL6A1-205ENST00000492851 ATP8A2Q9NTI2 1148 aa15.06■□□□□ 0
COL6A1-205ENST00000492851 PAG1Q9NWQ8 432 aa15.06■□□□□ 0
COL6A1-205ENST00000492851 MCM9Q9NXL9 1143 aa15.06■□□□□ 0
COL6A1-205ENST00000492851 SWAP70Q9UH65 585 aa15.06■□□□□ 0
COL6A1-205ENST00000492851 GJD2Q9UKL4 321 aa15.06■□□□□ 0
COL6A1-205ENST00000492851 CENPFP49454 3210 aa15.06■□□□□ 0
COL6A1-205ENST00000492851 GLRX3O76003 335 aaKnown RBP15.05■□□□□ -0
COL6A1-205ENST00000492851 HMGCRP04035 888 aa15.05■□□□□ -0
COL6A1-205ENST00000492851 XRCC5P13010 732 aaKnown RBP15.05■□□□□ -0
COL6A1-205ENST00000492851 PLCD1P51178 756 aa15.05■□□□□ -0
COL6A1-205ENST00000492851 CCNA1P78396 465 aa15.05■□□□□ -0
COL6A1-205ENST00000492851 SHISA4Q96DD7 197 aa15.05■□□□□ -0
COL6A1-205ENST00000492851 HAUS7Q99871 368 aa15.05■□□□□ -0
COL6A1-205ENST00000492851 NUDT12Q9BQG2 462 aa15.05■□□□□ -0
COL6A1-205ENST00000492851 PAK6Q9NQU5 681 aaPredicted RBP15.05■□□□□ -0
COL6A1-205ENST00000492851 NR2E3Q9Y5X4 410 aa15.05■□□□□ -0
COL6A1-205ENST00000492851 ZSWIM8A7E2V4 1837 aa15.05■□□□□ -0
COL6A1-205ENST00000492851 PTPRFP10586 1907 aa15.04■□□□□ -0
COL6A1-205ENST00000492851 LOC285556D6RIA3 1793 aa15.04■□□□□ -0
COL6A1-205ENST00000492851 RPTORQ8N122 1335 aa15.04■□□□□ -0
COL6A1-205ENST00000492851 TCRBV5S4A2TA0A5A2 114 aa15.04■□□□□ -0
COL6A1-205ENST00000492851 HABP4Q5JVS0 413 aaKnown RBP15.04■□□□□ -0
COL6A1-205ENST00000492851 UBE2Q1Q7Z7E8 422 aa15.04■□□□□ -0
COL6A1-205ENST00000492851 ANKLE1Q8NAG6 615 aa15.04■□□□□ -0
COL6A1-205ENST00000492851 DEFB118Q96PH6 123 aa15.04■□□□□ -0
COL6A1-205ENST00000492851 BOLA2Q9H3K6 86 aa15.04■□□□□ -0
COL6A1-205ENST00000492851 CWC22Q9HCG8 908 aaKnown RBP15.04■□□□□ -0
COL6A1-205ENST00000492851 HMX1Q9NP08 348 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms