RNA–Protein interactions for RNA: ENST00000492595.5

SEC22A-210, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 972 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-210ENST00000492595 SMAD3P84022 425 aaKnown RBP11.38□□□□□ -0.59
SEC22A-210ENST00000492595 TRIM32Q13049 653 aa11.38□□□□□ -0.59
SEC22A-210ENST00000492595 PABPC4Q13310 644 aaKnown RBP eCLIP11.38□□□□□ -0.59
SEC22A-210ENST00000492595 FKBP5Q13451 457 aaPredicted RBP11.38□□□□□ -0.59
SEC22A-210ENST00000492595 TSR1Q2NL82 804 aaKnown RBP11.38□□□□□ -0.59
SEC22A-210ENST00000492595 LRRFIP2Q9Y608 721 aaKnown RBP11.38□□□□□ -0.59
SEC22A-210ENST00000492595 TRIM75PA6NK02 468 aa11.37□□□□□ -0.59
SEC22A-210ENST00000492595 PHF20L1A8MW92 1017 aa11.37□□□□□ -0.59
SEC22A-210ENST00000492595 MAP3K7O43318 606 aa11.37□□□□□ -0.59
SEC22A-210ENST00000492595 CTNND1O60716 968 aaKnown RBP11.37□□□□□ -0.59
SEC22A-210ENST00000492595 XRCC5P13010 732 aaKnown RBP11.37□□□□□ -0.59
SEC22A-210ENST00000492595 FLIIQ13045 1269 aa11.37□□□□□ -0.59
SEC22A-210ENST00000492595 MAP3K21Q5TCX8 1036 aa11.37□□□□□ -0.59
SEC22A-210ENST00000492595 G2E3Q7L622 706 aa11.37□□□□□ -0.59
SEC22A-210ENST00000492595 TSPYL6Q8N831 410 aa11.37□□□□□ -0.59
SEC22A-210ENST00000492595 PLSCR2Q9NRY7 297 aa11.37□□□□□ -0.59
SEC22A-210ENST00000492595 RAPGEFL1Q9UHV5 662 aa11.37□□□□□ -0.59
SEC22A-210ENST00000492595 ALPK3Q96L96 1907 aa11.37□□□□□ -0.59
SEC22A-210ENST00000492595 BHMG1C9JSJ3 638 aaPredicted RBP11.36□□□□□ -0.59
SEC22A-210ENST00000492595 CYP2B6P20813 491 aa11.36□□□□□ -0.59
SEC22A-210ENST00000492595 ZEB1P37275 1124 aaPredicted RBP11.36□□□□□ -0.59
SEC22A-210ENST00000492595 CDC42EP5Q6NZY7 148 aa11.36□□□□□ -0.59
SEC22A-210ENST00000492595 PROCA1Q8NCQ7 364 aaPredicted RBP11.36□□□□□ -0.59
SEC22A-210ENST00000492595 SOCS4Q8WXH5 440 aa11.36□□□□□ -0.59
SEC22A-210ENST00000492595 TRIB2Q92519 343 aa11.36□□□□□ -0.59
SEC22A-210ENST00000492595 NUDT12Q9BQG2 462 aa11.36□□□□□ -0.59
SEC22A-210ENST00000492595 ADAMTS8Q9UP79 889 aa11.36□□□□□ -0.59
SEC22A-210ENST00000492595 ZKSCAN1P17029 563 aaPredicted RBP11.35□□□□□ -0.59
SEC22A-210ENST00000492595 MAP3K12Q12852 859 aa11.35□□□□□ -0.59
SEC22A-210ENST00000492595 NFIAQ12857 509 aa11.35□□□□□ -0.59
SEC22A-210ENST00000492595 PDE3AQ14432 1141 aa11.35□□□□□ -0.59
SEC22A-210ENST00000492595 ZSCAN29Q8IWY8 852 aaPredicted RBP11.35□□□□□ -0.59
SEC22A-210ENST00000492595 WDR66Q8TBY9 1149 aa11.35□□□□□ -0.59
SEC22A-210ENST00000492595 SENP6Q9GZR1 1112 aaPredicted RBP11.35□□□□□ -0.59
SEC22A-210ENST00000492595 USP40Q9NVE5 1235 aa11.35□□□□□ -0.59
SEC22A-210ENST00000492595 MGAMO43451 1857 aa11.34□□□□□ -0.59
SEC22A-210ENST00000492595 CACNB2Q08289 660 aaPredicted RBP11.34□□□□□ -0.59
SEC22A-210ENST00000492595 SHHQ15465 462 aa11.34□□□□□ -0.59
SEC22A-210ENST00000492595 TWISTNBQ3B726 338 aaPredicted RBP11.34□□□□□ -0.59
SEC22A-210ENST00000492595 METTL24Q5JXM2 366 aa11.34□□□□□ -0.59
SEC22A-210ENST00000492595 TREML2Q5T2D2 321 aa11.34□□□□□ -0.59
SEC22A-210ENST00000492595 ATXN2LQ8WWM7 1075 aaKnown RBP11.34□□□□□ -0.59
SEC22A-210ENST00000492595 TTYH1Q9H313 450 aaPredicted RBP11.34□□□□□ -0.59
SEC22A-210ENST00000492595 FAM198AQ9UFP1 575 aa11.34□□□□□ -0.59
SEC22A-210ENST00000492595 DAGLAQ9Y4D2 1042 aa11.34□□□□□ -0.59
SEC22A-210ENST00000492595 DDX60LQ5H9U9 1706 aaKnown RBP11.33□□□□□ -0.6
SEC22A-210ENST00000492595 APAF1O14727 1248 aa11.33□□□□□ -0.6
SEC22A-210ENST00000492595 ENTPD3O75355 529 aa11.33□□□□□ -0.6
SEC22A-210ENST00000492595 EPHA10Q5JZY3 1008 aa11.33□□□□□ -0.6
SEC22A-210ENST00000492595 CCAR1Q8IX12 1150 aaKnown RBP11.33□□□□□ -0.6
SEC22A-210ENST00000492595 IL27Q8NEV9 243 aa11.33□□□□□ -0.6
SEC22A-210ENST00000492595 TBC1D2Q9BYX2 928 aa11.33□□□□□ -0.6
SEC22A-210ENST00000492595 PUS3Q9BZE2 481 aaKnown RBP11.33□□□□□ -0.6
SEC22A-210ENST00000492595 NPDC1Q9NQX5 325 aaPredicted RBP11.33□□□□□ -0.6
SEC22A-210ENST00000492595 C9orf78Q9NZ63 289 aaPredicted RBP11.33□□□□□ -0.6
SEC22A-210ENST00000492595 MYBBP1AQ9BQG0 1328 aaKnown RBP11.33□□□□□ -0.6
SEC22A-210ENST00000492595 EYSQ5T1H1 3165 aa11.32□□□□□ -0.6
SEC22A-210ENST00000492595 GRM8O00222 908 aa11.32□□□□□ -0.6
SEC22A-210ENST00000492595 PDE8BO95263 885 aa11.32□□□□□ -0.6
SEC22A-210ENST00000492595 IFIT1P09914 478 aaKnown RBP11.32□□□□□ -0.6
SEC22A-210ENST00000492595 RGS2P41220 211 aa11.32□□□□□ -0.6
SEC22A-210ENST00000492595 MAP3K10Q02779 954 aa11.32□□□□□ -0.6
SEC22A-210ENST00000492595 ZFPM1Q8IX07 1006 aa11.32□□□□□ -0.6
SEC22A-210ENST00000492595 GPRC5AQ8NFJ5 357 aa11.32□□□□□ -0.6
SEC22A-210ENST00000492595 C1QTNF1Q9BXJ1 281 aa11.32□□□□□ -0.6
SEC22A-210ENST00000492595 ASCC2Q9H1I8 757 aaPredicted RBP11.32□□□□□ -0.6
SEC22A-210ENST00000492595 CDHR5Q9HBB8 845 aa11.32□□□□□ -0.6
SEC22A-210ENST00000492595 MORF4L1Q9UBU8 362 aa11.32□□□□□ -0.6
SEC22A-210ENST00000492595 KIF16BQ96L93 1317 aa11.32□□□□□ -0.6
SEC22A-210ENST00000492595 MSCO60682 206 aa11.31□□□□□ -0.6
SEC22A-210ENST00000492595 LDHBP07195 334 aaKnown RBP11.31□□□□□ -0.6
SEC22A-210ENST00000492595 CCND3P30281 292 aaPredicted RBP11.31□□□□□ -0.6
SEC22A-210ENST00000492595 MAPK4P31152 587 aa11.31□□□□□ -0.6
SEC22A-210ENST00000492595 RGS3P49796 1198 aa11.31□□□□□ -0.6
SEC22A-210ENST00000492595 IRX3P78415 501 aaPredicted RBP11.31□□□□□ -0.6
SEC22A-210ENST00000492595 SPP2Q13103 211 aa11.31□□□□□ -0.6
SEC22A-210ENST00000492595 DIXDC1Q155Q3 683 aa11.31□□□□□ -0.6
SEC22A-210ENST00000492595 PROX2Q3B8N5 592 aa11.31□□□□□ -0.6
SEC22A-210ENST00000492595 C9orf50Q5SZB4 431 aa11.31□□□□□ -0.6
SEC22A-210ENST00000492595 BEND3Q5T5X7 828 aa11.31□□□□□ -0.6
SEC22A-210ENST00000492595 ZNF280CQ8ND82 737 aa11.31□□□□□ -0.6
SEC22A-210ENST00000492595 IDI2Q9BXS1 227 aa11.31□□□□□ -0.6
SEC22A-210ENST00000492595 PRUNE2Q8WUY3 3088 aa11.31□□□□□ -0.6
SEC22A-210ENST00000492595 LAMA2P24043 3122 aaKnown RBP11.31□□□□□ -0.6
SEC22A-210ENST00000492595 ATRNL1Q5VV63 1379 aa11.3□□□□□ -0.6
SEC22A-210ENST00000492595 MUC3AQ02505 3323 aa11.3□□□□□ -0.6
SEC22A-210ENST00000492595 DNM1LO00429 736 aa11.3□□□□□ -0.6
SEC22A-210ENST00000492595 RTP1P59025 263 aa11.3□□□□□ -0.6
SEC22A-210ENST00000492595 MFSD14CQ5VZR4 134 aa11.3□□□□□ -0.6
SEC22A-210ENST00000492595 ADAMTS19Q8TE59 1207 aa11.3□□□□□ -0.6
SEC22A-210ENST00000492595 TSR2Q969E8 191 aaKnown RBP11.3□□□□□ -0.6
SEC22A-210ENST00000492595 ASB2Q96Q27 587 aa11.3□□□□□ -0.6
SEC22A-210ENST00000492595 UHRF1Q96T88 793 aaPredicted RBP11.3□□□□□ -0.6
SEC22A-210ENST00000492595 CWC22Q9HCG8 908 aaKnown RBP11.3□□□□□ -0.6
SEC22A-210ENST00000492595 PRDM5Q9NQX1 630 aaPredicted RBP11.3□□□□□ -0.6
SEC22A-210ENST00000492595 RABGEF1Q9UJ41 708 aa11.3□□□□□ -0.6
SEC22A-210ENST00000492595 ATP11BQ9Y2G3 1177 aa11.3□□□□□ -0.6
SEC22A-210ENST00000492595 HMGCS2P54868 508 aa11.29□□□□□ -0.6
SEC22A-210ENST00000492595 MRPS5P82675 430 aaKnown RBP11.29□□□□□ -0.6
SEC22A-210ENST00000492595 PUM3Q15397 648 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms