RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 HLA-DOAP06340 250 aa14.27□□□□□ -0.13
MDC1-207ENST00000492462 PLCD1P51178 756 aa14.27□□□□□ -0.13
MDC1-207ENST00000492462 HMGCS2P54868 508 aa14.27□□□□□ -0.13
MDC1-207ENST00000492462 LACTBP83111 547 aaPredicted RBP14.27□□□□□ -0.13
MDC1-207ENST00000492462 CERS3Q8IU89 383 aa14.27□□□□□ -0.13
MDC1-207ENST00000492462 ZNF280CQ8ND82 737 aa14.27□□□□□ -0.13
MDC1-207ENST00000492462 TRIM34Q9BYJ4 488 aa14.27□□□□□ -0.13
MDC1-207ENST00000492462 SMIM22K7EJ46 135 aa14.26□□□□□ -0.13
MDC1-207ENST00000492462 MBD4O95243 580 aa14.26□□□□□ -0.13
MDC1-207ENST00000492462 CYP2D6P10635 497 aa14.26□□□□□ -0.13
MDC1-207ENST00000492462 BCRP11274 1271 aa14.26□□□□□ -0.13
MDC1-207ENST00000492462 PARK7Q99497 189 aaKnown RBP14.26□□□□□ -0.13
MDC1-207ENST00000492462 CRNKL1Q9BZJ0 848 aaKnown RBP14.26□□□□□ -0.13
MDC1-207ENST00000492462 ZBTB21Q9ULJ3 1066 aa14.26□□□□□ -0.13
MDC1-207ENST00000492462 PTCH2Q9Y6C5 1203 aa14.26□□□□□ -0.13
MDC1-207ENST00000492462 MGAMO43451 1857 aa14.26□□□□□ -0.13
MDC1-207ENST00000492462 GH2P01242 217 aa14.25□□□□□ -0.13
MDC1-207ENST00000492462 ASNSP08243 561 aa14.25□□□□□ -0.13
MDC1-207ENST00000492462 TATDN1Q6P1N9 297 aa14.25□□□□□ -0.13
MDC1-207ENST00000492462 TRIM47Q96LD4 638 aa14.25□□□□□ -0.13
MDC1-207ENST00000492462 WDR18Q9BV38 432 aa14.25□□□□□ -0.13
MDC1-207ENST00000492462 EHD4Q9H223 541 aa14.25□□□□□ -0.13
MDC1-207ENST00000492462 DCP1AQ9NPI6 582 aaPredicted RBP14.25□□□□□ -0.13
MDC1-207ENST00000492462 MCM9Q9NXL9 1143 aa14.25□□□□□ -0.13
MDC1-207ENST00000492462 SERPINB13Q9UIV8 391 aa14.25□□□□□ -0.13
MDC1-207ENST00000492462 AGTPBP1Q9UPW5 1226 aa14.25□□□□□ -0.13
MDC1-207ENST00000492462 DOCK3Q8IZD9 2030 aa14.24□□□□□ -0.13
MDC1-207ENST00000492462 POLR3DP05423 398 aaPredicted RBP14.24□□□□□ -0.13
MDC1-207ENST00000492462 SHMT1P34896 483 aa14.24□□□□□ -0.13
MDC1-207ENST00000492462 PSMC4P43686 418 aa14.24□□□□□ -0.13
MDC1-207ENST00000492462 MTMR2Q13614 643 aa14.24□□□□□ -0.13
MDC1-207ENST00000492462 UBE3CQ15386 1083 aa14.24□□□□□ -0.13
MDC1-207ENST00000492462 SH3D19Q5HYK7 790 aa14.24□□□□□ -0.13
MDC1-207ENST00000492462 TTC6Q86TZ1 520 aa14.24□□□□□ -0.13
MDC1-207ENST00000492462 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.24□□□□□ -0.131e-6■■■■□ 20.5
MDC1-207ENST00000492462 PUS7LQ9H0K6 701 aaKnown RBP14.24□□□□□ -0.13
MDC1-207ENST00000492462 SLC45A1Q9Y2W3 748 aa14.24□□□□□ -0.13
MDC1-207ENST00000492462 CEP290O15078 2479 aa14.24□□□□□ -0.13
MDC1-207ENST00000492462 CYP2D7A0A087X1C5 515 aa14.23□□□□□ -0.13
MDC1-207ENST00000492462 BACE1P56817 501 aa14.23□□□□□ -0.13
MDC1-207ENST00000492462 GABPAQ06546 454 aa14.23□□□□□ -0.13
MDC1-207ENST00000492462 KIF22Q14807 665 aa14.23□□□□□ -0.13
MDC1-207ENST00000492462 PROCA1Q8NCQ7 364 aaPredicted RBP14.23□□□□□ -0.13
MDC1-207ENST00000492462 SLC44A5Q8NCS7 719 aa14.23□□□□□ -0.13
MDC1-207ENST00000492462 DYNLL2Q96FJ2 89 aa14.23□□□□□ -0.13
MDC1-207ENST00000492462 AS3MTQ9HBK9 375 aa14.23□□□□□ -0.13
MDC1-207ENST00000492462 MYH8P13535 1937 aa14.22□□□□□ -0.13
MDC1-207ENST00000492462 POTEFA5A3E0 1075 aa14.22□□□□□ -0.13
MDC1-207ENST00000492462 OSBPP22059 807 aa14.22□□□□□ -0.13
MDC1-207ENST00000492462 ARHGEF6Q15052 776 aa14.22□□□□□ -0.13
MDC1-207ENST00000492462 KBTBD3Q8NAB2 608 aa14.22□□□□□ -0.13
MDC1-207ENST00000492462 PI4K2BQ8TCG2 481 aa14.22□□□□□ -0.13
MDC1-207ENST00000492462 SMCR8Q8TEV9 937 aaPredicted RBP14.22□□□□□ -0.13
MDC1-207ENST00000492462 ARMC5Q96C12 935 aa14.22□□□□□ -0.13
MDC1-207ENST00000492462 GPATCH3Q96I76 525 aa14.22□□□□□ -0.13
MDC1-207ENST00000492462 TBC1D2Q9BYX2 928 aa14.22□□□□□ -0.13
MDC1-207ENST00000492462 ASCC2Q9H1I8 757 aaPredicted RBP14.22□□□□□ -0.13
MDC1-207ENST00000492462 SALL3Q9BXA9 1300 aa14.21□□□□□ -0.13
MDC1-207ENST00000492462 PEX10O60683 326 aa14.21□□□□□ -0.13
MDC1-207ENST00000492462 FMNL1O95466 1100 aaPredicted RBP14.21□□□□□ -0.13
MDC1-207ENST00000492462 MYCP01106 439 aaPredicted RBP14.21□□□□□ -0.13
MDC1-207ENST00000492462 GUCY1A2P33402 732 aa14.21□□□□□ -0.13
MDC1-207ENST00000492462 MNX1P50219 401 aaPredicted RBP14.21□□□□□ -0.13
MDC1-207ENST00000492462 ABCB5Q2M3G0 1257 aa14.21□□□□□ -0.13
MDC1-207ENST00000492462 CERKLQ49MI3 558 aaPredicted RBP14.21□□□□□ -0.13
MDC1-207ENST00000492462 ANKRD13CQ8N6S4 541 aa14.21□□□□□ -0.13
MDC1-207ENST00000492462 EXOC6Q8TAG9 804 aa14.21□□□□□ -0.13
MDC1-207ENST00000492462 ACER1Q8TDN7 264 aa14.21□□□□□ -0.13
MDC1-207ENST00000492462 SH3TC2Q8TF17 1288 aa14.21□□□□□ -0.13
MDC1-207ENST00000492462 OSBP2Q969R2 916 aa14.21□□□□□ -0.13
MDC1-207ENST00000492462 EMILIN3Q9NT22 766 aa14.21□□□□□ -0.13
MDC1-207ENST00000492462 GINM1Q9NU53 330 aa14.21□□□□□ -0.13
MDC1-207ENST00000492462 SRRDQ9UH36 339 aa14.21□□□□□ -0.13
MDC1-207ENST00000492462 SLC4A4Q9Y6R1 1079 aa14.21□□□□□ -0.13
MDC1-207ENST00000492462 RANBP2P49792 3224 aaKnown RBP14.21□□□□□ -0.13
MDC1-207ENST00000492462 USP17L10C9JJH3 530 aa14.2□□□□□ -0.14
MDC1-207ENST00000492462 USP17L12C9JPN9 530 aa14.2□□□□□ -0.14
MDC1-207ENST00000492462 USP17L21D6R901 530 aa14.2□□□□□ -0.14
MDC1-207ENST00000492462 HDAC1Q13547 482 aaPredicted RBP14.2□□□□□ -0.14
MDC1-207ENST00000492462 RAB3GAP1Q15042 981 aa14.2□□□□□ -0.14
MDC1-207ENST00000492462 ZYXQ15942 572 aaKnown RBP14.2□□□□□ -0.14
MDC1-207ENST00000492462 ANKRD45Q5TZF3 282 aa14.2□□□□□ -0.14
MDC1-207ENST00000492462 ZSCAN25Q6NSZ9 544 aa14.2□□□□□ -0.14
MDC1-207ENST00000492462 ZNF333Q96JL9 665 aa14.2□□□□□ -0.14
MDC1-207ENST00000492462 ATP8A2Q9NTI2 1148 aa14.2□□□□□ -0.14
MDC1-207ENST00000492462 TMOD4Q9NZQ9 345 aa14.2□□□□□ -0.14
MDC1-207ENST00000492462 GABRQQ9UN88 632 aa14.2□□□□□ -0.14
MDC1-207ENST00000492462 BRCA2P51587 3418 aa14.19□□□□□ -0.14
MDC1-207ENST00000492462 RBBP6Q7Z6E9 1792 aaKnown RBP14.19□□□□□ -0.14
MDC1-207ENST00000492462 TTC41PQ6P2S7 1318 aa14.19□□□□□ -0.14
MDC1-207ENST00000492462 MYPNQ86TC9 1320 aa14.19□□□□□ -0.14
MDC1-207ENST00000492462 C19orf81C9J6K1 198 aa14.19□□□□□ -0.14
MDC1-207ENST00000492462 M0R2C6 588 aa14.19□□□□□ -0.14
MDC1-207ENST00000492462 RNF113AO15541 343 aaKnown RBP14.19□□□□□ -0.14
MDC1-207ENST00000492462 GNRH1P01148 92 aa14.19□□□□□ -0.14
MDC1-207ENST00000492462 MX1P20591 662 aa14.19□□□□□ -0.14
MDC1-207ENST00000492462 PRKCZQ05513 592 aa14.19□□□□□ -0.14
MDC1-207ENST00000492462 SEPT2Q15019 361 aa14.19□□□□□ -0.14
MDC1-207ENST00000492462 SLC9C1Q4G0N8 1177 aa14.19□□□□□ -0.14
MDC1-207ENST00000492462 C12orf60Q5U649 245 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms