RNA–Protein interactions for RNA: ENST00000491990.5

NUP188-209, Transcript of nucleoporin 188, humanhuman

TSL 5

Gene NUP188, Length 381 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-209ENST00000491990 GDF11O95390 407 aa28.08■■■□□ 2.09
NUP188-209ENST00000491990 BACE1P56817 501 aa28.08■■■□□ 2.09
NUP188-209ENST00000491990 MTMR2Q13614 643 aa28.08■■■□□ 2.09
NUP188-209ENST00000491990 MTFR1Q15390 333 aa28.08■■■□□ 2.09
NUP188-209ENST00000491990 TMOD4Q9NZQ9 345 aa28.08■■■□□ 2.09
NUP188-209ENST00000491990 BIN2Q9UBW5 565 aaPredicted RBP28.08■■■□□ 2.09
NUP188-209ENST00000491990 ZBTB21Q9ULJ3 1066 aa28.08■■■□□ 2.09
NUP188-209ENST00000491990 GABRQQ9UN88 632 aa28.08■■■□□ 2.09
NUP188-209ENST00000491990 UBXN2AP68543 259 aa28.07■■■□□ 2.08
NUP188-209ENST00000491990 JAG1P78504 1218 aa28.07■■■□□ 2.08
NUP188-209ENST00000491990 ASCC2Q9H1I8 757 aaPredicted RBP28.07■■■□□ 2.08
NUP188-209ENST00000491990 C19orf81C9J6K1 198 aa28.06■■■□□ 2.08
NUP188-209ENST00000491990 PDE3AQ14432 1141 aa28.06■■■□□ 2.08
NUP188-209ENST00000491990 TTC6Q86TZ1 520 aa28.06■■■□□ 2.08
NUP188-209ENST00000491990 COA7Q96BR5 231 aa28.06■■■□□ 2.08
NUP188-209ENST00000491990 EHD4Q9H223 541 aa28.06■■■□□ 2.08
NUP188-209ENST00000491990 MAGEB6P1A0A0J9YX57 407 aa28.05■■■□□ 2.08
NUP188-209ENST00000491990 USP17L10C9JJH3 530 aa28.05■■■□□ 2.08
NUP188-209ENST00000491990 FLT3LGP49771 235 aa28.05■■■□□ 2.08
NUP188-209ENST00000491990 SLC9C2Q5TAH2 1124 aa28.05■■■□□ 2.08
NUP188-209ENST00000491990 DOCK3Q8IZD9 2030 aa28.05■■■□□ 2.08
NUP188-209ENST00000491990 DNAJC2Q99543 621 aaKnown RBP28.05■■■□□ 2.08
NUP188-209ENST00000491990 RIOK1Q9BRS2 568 aaKnown RBP28.05■■■□□ 2.08
NUP188-209ENST00000491990 BCL11AQ9H165 835 aa28.05■■■□□ 2.08
NUP188-209ENST00000491990 SERPINB13Q9UIV8 391 aa28.05■■■□□ 2.08
NUP188-209ENST00000491990 GOLIM4O00461 696 aa28.04■■■□□ 2.08
NUP188-209ENST00000491990 ADCY3O60266 1144 aa28.04■■■□□ 2.08
NUP188-209ENST00000491990 PDE6AP16499 860 aa28.04■■■□□ 2.08
NUP188-209ENST00000491990 IRX3P78415 501 aaPredicted RBP28.04■■■□□ 2.08
NUP188-209ENST00000491990 IRF5Q13568 498 aa28.04■■■□□ 2.08
NUP188-209ENST00000491990 SHROOM1Q2M3G4 852 aaPredicted RBP28.04■■■□□ 2.08
NUP188-209ENST00000491990 NKX2-3Q8TAU0 364 aa28.04■■■□□ 2.08
NUP188-209ENST00000491990 CCL5P13501 91 aa28.03■■■□□ 2.08
NUP188-209ENST00000491990 HOXA7P31268 230 aaPredicted RBP28.03■■■□□ 2.08
NUP188-209ENST00000491990 TATDN1Q6P1N9 297 aa28.03■■■□□ 2.08
NUP188-209ENST00000491990 PXYLP1Q8TE99 480 aa28.03■■■□□ 2.08
NUP188-209ENST00000491990 GH2P01242 217 aa28.02■■■□□ 2.08
NUP188-209ENST00000491990 CRNKL1Q9BZJ0 848 aaKnown RBP28.02■■■□□ 2.08
NUP188-209ENST00000491990 RNF208Q9H0X6 261 aa28.02■■■□□ 2.08
NUP188-209ENST00000491990 ZNF532Q9HCE3 1301 aa28.01■■■□□ 2.07
NUP188-209ENST00000491990 GJB1P08034 283 aa28.01■■■□□ 2.07
NUP188-209ENST00000491990 C20orf194Q5TEA3 1177 aa28.01■■■□□ 2.07
NUP188-209ENST00000491990 GCC1Q96CN9 775 aa28.01■■■□□ 2.07
NUP188-209ENST00000491990 NAV1Q8NEY1 1877 aa28■■■□□ 2.07
NUP188-209ENST00000491990 MORF4L1Q9UBU8 362 aa28■■■□□ 2.07
NUP188-209ENST00000491990 DDX60LQ5H9U9 1706 aaKnown RBP27.99■■■□□ 2.07
NUP188-209ENST00000491990 POLR3DP05423 398 aaPredicted RBP27.99■■■□□ 2.07
NUP188-209ENST00000491990 ELNP15502 786 aa27.99■■■□□ 2.07
NUP188-209ENST00000491990 ATP5JP18859 108 aa27.99■■■□□ 2.07
NUP188-209ENST00000491990 GJA8P48165 433 aa27.99■■■□□ 2.07
NUP188-209ENST00000491990 CERKLQ49MI3 558 aaPredicted RBP27.99■■■□□ 2.07
NUP188-209ENST00000491990 USP17L2Q6R6M4 530 aa27.99■■■□□ 2.07
NUP188-209ENST00000491990 SHISA4Q96DD7 197 aa27.99■■■□□ 2.07
NUP188-209ENST00000491990 PAG1Q9NWQ8 432 aa27.99■■■□□ 2.07
NUP188-209ENST00000491990 TAOK2Q9UL54 1235 aa27.99■■■□□ 2.07
NUP188-209ENST00000491990 TCRBV5S4A2TA0A5A2 114 aa27.98■■■□□ 2.07
NUP188-209ENST00000491990 P2RX7Q99572 595 aaKnown RBP27.98■■■□□ 2.07
NUP188-209ENST00000491990 BOLA2Q9H3K6 86 aa27.98■■■□□ 2.07
NUP188-209ENST00000491990 INHAP05111 366 aa27.97■■■□□ 2.07
NUP188-209ENST00000491990 PLCD1P51178 756 aa27.97■■■□□ 2.07
NUP188-209ENST00000491990 HERVK_113P62684 666 aa27.97■■■□□ 2.07
NUP188-209ENST00000491990 ABCB5Q2M3G0 1257 aa27.97■■■□□ 2.07
NUP188-209ENST00000491990 EDC3Q96F86 508 aaKnown RBP27.97■■■□□ 2.07
NUP188-209ENST00000491990 LRRCC1Q9C099 1032 aa27.97■■■□□ 2.07
NUP188-209ENST00000491990 CABP5Q9NP86 173 aa27.97■■■□□ 2.07
NUP188-209ENST00000491990 EMILIN3Q9NT22 766 aa27.97■■■□□ 2.07
NUP188-209ENST00000491990 RAB3GAP1Q15042 981 aa27.96■■■□□ 2.07
NUP188-209ENST00000491990 GTF3C2Q8WUA4 911 aaPredicted RBP27.96■■■□□ 2.07
NUP188-209ENST00000491990 FEZ1Q99689 392 aa27.96■■■□□ 2.07
NUP188-209ENST00000491990 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.96■■■□□ 2.072e-7■■■■□ 25.3
NUP188-209ENST00000491990 UNC93B1Q9H1C4 597 aa27.96■■■□□ 2.07
NUP188-209ENST00000491990 MCM9Q9NXL9 1143 aa27.96■■■□□ 2.07
NUP188-209ENST00000491990 CEP290O15078 2479 aa27.96■■■□□ 2.07
NUP188-209ENST00000491990 SHMT1P34896 483 aa27.95■■■□□ 2.06
NUP188-209ENST00000491990 HAUS7Q99871 368 aa27.95■■■□□ 2.06
NUP188-209ENST00000491990 USP14P54578 494 aa27.94■■■□□ 2.06
NUP188-209ENST00000491990 LCORLQ8N3X6 602 aa27.94■■■□□ 2.06
NUP188-209ENST00000491990 GPRC5AQ8NFJ5 357 aa27.94■■■□□ 2.06
NUP188-209ENST00000491990 U2AF1L4Q8WU68 220 aaKnown RBP27.94■■■□□ 2.06
NUP188-209ENST00000491990 C12orf42Q96LP6 360 aa27.94■■■□□ 2.06
NUP188-209ENST00000491990 CAPN2P17655 700 aa27.93■■■□□ 2.06
NUP188-209ENST00000491990 ADD2P35612 726 aa27.93■■■□□ 2.06
NUP188-209ENST00000491990 GABPAQ06546 454 aa27.93■■■□□ 2.06
NUP188-209ENST00000491990 SDR42E1Q8WUS8 393 aa27.93■■■□□ 2.06
NUP188-209ENST00000491990 DCP1AQ9NPI6 582 aaPredicted RBP27.93■■■□□ 2.06
NUP188-209ENST00000491990 ZYXQ15942 572 aaKnown RBP27.92■■■□□ 2.06
NUP188-209ENST00000491990 KIAA1683Q9H0B3 1180 aa27.92■■■□□ 2.06
NUP188-209ENST00000491990 ARMT1Q9H993 441 aa27.92■■■□□ 2.06
NUP188-209ENST00000491990 GJD2Q9UKL4 321 aa27.92■■■□□ 2.06
NUP188-209ENST00000491990 MYH7P12883 1935 aa27.92■■■□□ 2.06
NUP188-209ENST00000491990 SGPL1O95470 568 aa27.91■■■□□ 2.06
NUP188-209ENST00000491990 TXNRD2Q9NNW7 524 aa27.91■■■□□ 2.06
NUP188-209ENST00000491990 RBPJLQ9UBG7 517 aa27.91■■■□□ 2.06
NUP188-209ENST00000491990 USP17L15C9J2P7 530 aa27.9■■■□□ 2.06
NUP188-209ENST00000491990 USP17L13C9JLJ4 530 aa27.9■■■□□ 2.06
NUP188-209ENST00000491990 USP17L11C9JVI0 530 aa27.9■■■□□ 2.06
NUP188-209ENST00000491990 USP17L18D6R9N7 530 aa27.9■■■□□ 2.06
NUP188-209ENST00000491990 USP17L22D6RA61 530 aa27.9■■■□□ 2.06
NUP188-209ENST00000491990 USP17L17D6RBQ6 530 aa27.9■■■□□ 2.06
NUP188-209ENST00000491990 USP17L19D6RCP7 530 aa27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms