RNA–Protein interactions for RNA: ENST00000491944.1

SCN5A-213, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best)

Gene SCN5A, Length 1,382 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-213ENST00000491944 RASAL3Q86YV0 1011 aa27.6■■■□□ 2.01
SCN5A-213ENST00000491944 MPHOSPH10O00566 681 aaKnown RBP27.6■■■□□ 2.01
SCN5A-213ENST00000491944 PRDM1O75626 825 aa27.6■■■□□ 2.01
SCN5A-213ENST00000491944 ABCB5Q2M3G0 1257 aa27.6■■■□□ 2.01
SCN5A-213ENST00000491944 SHROOM1Q2M3G4 852 aaPredicted RBP27.6■■■□□ 2.01
SCN5A-213ENST00000491944 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.6■■■□□ 2.01
SCN5A-213ENST00000491944 REC8O95072 547 aa27.59■■■□□ 2.01
SCN5A-213ENST00000491944 GH2P01242 217 aa27.59■■■□□ 2.01
SCN5A-213ENST00000491944 MKRN3Q13064 507 aaKnown RBP27.59■■■□□ 2.01
SCN5A-213ENST00000491944 CNKSR2Q8WXI2 1034 aa27.59■■■□□ 2.01
SCN5A-213ENST00000491944 CCDC102AQ96A19 550 aa27.59■■■□□ 2.01
SCN5A-213ENST00000491944 OPTNQ96CV9 577 aa27.59■■■□□ 2.01
SCN5A-213ENST00000491944 OTUD5Q96G74 571 aa27.59■■■□□ 2.01
SCN5A-213ENST00000491944 CAPNS2Q96L46 248 aa27.59■■■□□ 2.01
SCN5A-213ENST00000491944 CABP5Q9NP86 173 aa27.59■■■□□ 2.01
SCN5A-213ENST00000491944 ZBTB21Q9ULJ3 1066 aa27.59■■■□□ 2.01
SCN5A-213ENST00000491944 ASNSP08243 561 aa27.58■■■□□ 2.01
SCN5A-213ENST00000491944 SLC10A3P09131 477 aa27.58■■■□□ 2.01
SCN5A-213ENST00000491944 RASA1P20936 1047 aa27.58■■■□□ 2.01
SCN5A-213ENST00000491944 ECE1P42892 770 aa27.58■■■□□ 2.01
SCN5A-213ENST00000491944 JAG1P78504 1218 aa27.58■■■□□ 2.01
SCN5A-213ENST00000491944 ERO1BQ86YB8 467 aa27.58■■■□□ 2.01
SCN5A-213ENST00000491944 TBC1D10CQ8IV04 446 aa27.58■■■□□ 2.01
SCN5A-213ENST00000491944 WNK4Q96J92 1243 aa27.58■■■□□ 2.01
SCN5A-213ENST00000491944 NBPF3Q9H094 633 aa27.58■■■□□ 2.01
SCN5A-213ENST00000491944 INCENPQ9NQS7 918 aa27.58■■■□□ 2.01
SCN5A-213ENST00000491944 TOMM22Q9NS69 142 aa27.58■■■□□ 2.01
SCN5A-213ENST00000491944 SPDYE5A6NIY4 337 aa27.57■■■□□ 2
SCN5A-213ENST00000491944 AKR1B1P15121 316 aa27.57■■■□□ 2
SCN5A-213ENST00000491944 PTPRAP18433 802 aa27.57■■■□□ 2
SCN5A-213ENST00000491944 AKNAD1Q5T1N1 836 aa27.57■■■□□ 2
SCN5A-213ENST00000491944 ZNF444Q8N0Y2 327 aaPredicted RBP27.57■■■□□ 2
SCN5A-213ENST00000491944 CCDC17Q96LX7 622 aa27.57■■■□□ 2
SCN5A-213ENST00000491944 MFSD6Q6ZSS7 791 aa27.56■■■□□ 2
SCN5A-213ENST00000491944 CCDC84Q86UT8 332 aaPredicted RBP27.56■■■□□ 2
SCN5A-213ENST00000491944 GINM1Q9NU53 330 aa27.56■■■□□ 2
SCN5A-213ENST00000491944 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.56■■■□□ 2
SCN5A-213ENST00000491944 TACC3Q9Y6A5 838 aa27.56■■■□□ 2
SCN5A-213ENST00000491944 VEGFBP49765 207 aa27.55■■■□□ 2
SCN5A-213ENST00000491944 RAB3GAP1Q15042 981 aa27.55■■■□□ 2
SCN5A-213ENST00000491944 RRP12Q5JTH9 1297 aaKnown RBP27.55■■■□□ 2
SCN5A-213ENST00000491944 SPRYD7Q5W111 196 aa27.55■■■□□ 2
SCN5A-213ENST00000491944 STAG1Q8WVM7 1258 aa27.55■■■□□ 2
SCN5A-213ENST00000491944 RNF41Q9H4P4 317 aaPredicted RBP27.55■■■□□ 2
SCN5A-213ENST00000491944 ZHX2Q9Y6X8 837 aa27.55■■■□□ 2
SCN5A-213ENST00000491944 PHIPQ8WWQ0 1821 aa27.55■■■□□ 2
SCN5A-213ENST00000491944 USP17L5A8MUK1 530 aa27.54■■■□□ 2
SCN5A-213ENST00000491944 FAM155AB1AL88 458 aaPredicted RBP27.54■■■□□ 2
SCN5A-213ENST00000491944 CYP21A2P08686 494 aa27.54■■■□□ 2
SCN5A-213ENST00000491944 GJA5P36382 358 aa27.54■■■□□ 2
SCN5A-213ENST00000491944 PPATQ06203 517 aa27.54■■■□□ 2
SCN5A-213ENST00000491944 WDR33Q9C0J8 1336 aaKnown RBP27.54■■■□□ 2
SCN5A-213ENST00000491944 RANBP6O60518 1105 aaKnown RBP27.53■■■□□ 2
SCN5A-213ENST00000491944 PPIL2Q13356 520 aa27.53■■■□□ 2
SCN5A-213ENST00000491944 TMEM179Q6ZVK1 233 aa27.53■■■□□ 2
SCN5A-213ENST00000491944 ORC4O43929 436 aa27.52■■■□□ 2
SCN5A-213ENST00000491944 ZBTB48P10074 688 aaPredicted RBP27.52■■■□□ 2
SCN5A-213ENST00000491944 PCP11498 1178 aaKnown RBP27.52■■■□□ 2
SCN5A-213ENST00000491944 SEPT2Q15019 361 aa27.52■■■□□ 2
SCN5A-213ENST00000491944 FAM47AQ5JRC9 791 aa27.52■■■□□ 2
SCN5A-213ENST00000491944 NEDD4P46934 1319 aa27.52■■■□□ 2
SCN5A-213ENST00000491944 AOC2O75106 756 aa27.51■■□□□ 1.99
SCN5A-213ENST00000491944 FGRP09769 529 aa27.51■■□□□ 1.99
SCN5A-213ENST00000491944 TSPY3P0CV98 308 aa27.51■■□□□ 1.99
SCN5A-213ENST00000491944 TSPY8P0CW00 308 aa27.51■■□□□ 1.99
SCN5A-213ENST00000491944 GUCY1A2P33402 732 aa27.51■■□□□ 1.99
SCN5A-213ENST00000491944 NOGQ13253 232 aa27.51■■□□□ 1.99
SCN5A-213ENST00000491944 NECTIN1Q15223 517 aa27.51■■□□□ 1.99
SCN5A-213ENST00000491944 CREB3L3Q68CJ9 461 aa27.51■■□□□ 1.99
SCN5A-213ENST00000491944 AS3MTQ9HBK9 375 aa27.51■■□□□ 1.99
SCN5A-213ENST00000491944 TSPY2A6NKD2 308 aa27.5■■□□□ 1.99
SCN5A-213ENST00000491944 IRF6O14896 467 aa27.5■■□□□ 1.99
SCN5A-213ENST00000491944 SLC27A2O14975 620 aa27.5■■□□□ 1.99
SCN5A-213ENST00000491944 TFAP4Q01664 338 aa27.5■■□□□ 1.99
SCN5A-213ENST00000491944 RNF20Q5VTR2 975 aa27.5■■□□□ 1.99
SCN5A-213ENST00000491944 GREB1LQ9C091 1923 aaPredicted RBP27.5■■□□□ 1.99
SCN5A-213ENST00000491944 C8orf34Q49A92 452 aa27.49■■□□□ 1.99
SCN5A-213ENST00000491944 TBC1D2Q9BYX2 928 aa27.49■■□□□ 1.99
SCN5A-213ENST00000491944 TAF6LQ9Y6J9 622 aa27.49■■□□□ 1.99
SCN5A-213ENST00000491944 TRIM75PA6NK02 468 aa27.48■■□□□ 1.99
SCN5A-213ENST00000491944 CLEC10AQ8IUN9 316 aa27.48■■□□□ 1.99
SCN5A-213ENST00000491944 ZNF280CQ8ND82 737 aa27.48■■□□□ 1.99
SCN5A-213ENST00000491944 CNNM2Q9H8M5 875 aa27.48■■□□□ 1.99
SCN5A-213ENST00000491944 AFG3L2Q9Y4W6 797 aa27.48■■□□□ 1.99
SCN5A-213ENST00000491944 B4E1Z4 1266 aa27.48■■□□□ 1.99
SCN5A-213ENST00000491944 EIF5BO60841 1220 aaKnown RBP27.48■■□□□ 1.99
SCN5A-213ENST00000491944 ICA1Q05084 483 aa27.48■■□□□ 1.99
SCN5A-213ENST00000491944 SPP2Q13103 211 aa27.48■■□□□ 1.99
SCN5A-213ENST00000491944 NEDD1Q8NHV4 660 aa27.48■■□□□ 1.99
SCN5A-213ENST00000491944 ESR2Q92731 530 aa27.48■■□□□ 1.99
SCN5A-213ENST00000491944 ZIC5Q96T25 663 aa27.48■■□□□ 1.99
SCN5A-213ENST00000491944 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.48■■□□□ 1.99
SCN5A-213ENST00000491944 KRT23Q9C075 422 aa27.48■■□□□ 1.99
SCN5A-213ENST00000491944 E7EWF7 191 aa27.47■■□□□ 1.99
SCN5A-213ENST00000491944 GTF2A2P52657 109 aa27.47■■□□□ 1.99
SCN5A-213ENST00000491944 KIF23Q02241 960 aaPredicted RBP27.47■■□□□ 1.99
SCN5A-213ENST00000491944 TRDNQ13061 729 aa27.47■■□□□ 1.99
SCN5A-213ENST00000491944 SNAPC2Q13487 334 aa27.47■■□□□ 1.99
SCN5A-213ENST00000491944 DNAJC5GQ8N7S2 189 aa27.47■■□□□ 1.99
SCN5A-213ENST00000491944 WDR18Q9BV38 432 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms