RNA–Protein interactions for RNA: ENST00000491915.1

COL6A4P1-203, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 5

Gene COL6A4P1, Length 1,251 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-203ENST00000491915 SLC45A1Q9Y2W3 748 aa10.78□□□□□ -0.68
COL6A4P1-203ENST00000491915 KIAA0100Q14667 2235 aaKnown RBP10.78□□□□□ -0.68
COL6A4P1-203ENST00000491915 ZSWIM8A7E2V4 1837 aa10.77□□□□□ -0.68
COL6A4P1-203ENST00000491915 CYP2D7A0A087X1C5 515 aa10.77□□□□□ -0.69
COL6A4P1-203ENST00000491915 FMNL1O95466 1100 aaPredicted RBP10.77□□□□□ -0.69
COL6A4P1-203ENST00000491915 HLA-DOAP06340 250 aa10.77□□□□□ -0.69
COL6A4P1-203ENST00000491915 ASNSP08243 561 aa10.77□□□□□ -0.69
COL6A4P1-203ENST00000491915 OSBPP22059 807 aa10.77□□□□□ -0.69
COL6A4P1-203ENST00000491915 MTMR2Q13614 643 aa10.77□□□□□ -0.69
COL6A4P1-203ENST00000491915 KIF22Q14807 665 aa10.77□□□□□ -0.69
COL6A4P1-203ENST00000491915 ARHGEF6Q15052 776 aa10.77□□□□□ -0.69
COL6A4P1-203ENST00000491915 UBE3CQ15386 1083 aa10.77□□□□□ -0.69
COL6A4P1-203ENST00000491915 POTEEQ6S8J3 1075 aa10.77□□□□□ -0.69
COL6A4P1-203ENST00000491915 CERS3Q8IU89 383 aa10.77□□□□□ -0.69
COL6A4P1-203ENST00000491915 ANKRD13CQ8N6S4 541 aa10.77□□□□□ -0.69
COL6A4P1-203ENST00000491915 PROCA1Q8NCQ7 364 aaPredicted RBP10.77□□□□□ -0.69
COL6A4P1-203ENST00000491915 ACER1Q8TDN7 264 aa10.77□□□□□ -0.69
COL6A4P1-203ENST00000491915 DYNLL2Q96FJ2 89 aa10.77□□□□□ -0.69
COL6A4P1-203ENST00000491915 TRIM34Q9BYJ4 488 aa10.77□□□□□ -0.69
COL6A4P1-203ENST00000491915 CRNKL1Q9BZJ0 848 aaKnown RBP10.77□□□□□ -0.69
COL6A4P1-203ENST00000491915 EHD4Q9H223 541 aa10.77□□□□□ -0.69
COL6A4P1-203ENST00000491915 MCM9Q9NXL9 1143 aa10.77□□□□□ -0.69
COL6A4P1-203ENST00000491915 SRRDQ9UH36 339 aa10.77□□□□□ -0.69
COL6A4P1-203ENST00000491915 GABRQQ9UN88 632 aa10.77□□□□□ -0.69
COL6A4P1-203ENST00000491915 DOCK3Q8IZD9 2030 aa10.77□□□□□ -0.69
COL6A4P1-203ENST00000491915 MYH1P12882 1939 aa10.76□□□□□ -0.69
COL6A4P1-203ENST00000491915 MYCP01106 439 aaPredicted RBP10.76□□□□□ -0.69
COL6A4P1-203ENST00000491915 EN2P19622 333 aaPredicted RBP10.76□□□□□ -0.69
COL6A4P1-203ENST00000491915 CERKLQ49MI3 558 aaPredicted RBP10.76□□□□□ -0.69
COL6A4P1-203ENST00000491915 SLC44A5Q8NCS7 719 aa10.76□□□□□ -0.69
COL6A4P1-203ENST00000491915 SH3TC2Q8TF17 1288 aa10.76□□□□□ -0.69
COL6A4P1-203ENST00000491915 OSBP2Q969R2 916 aa10.76□□□□□ -0.69
COL6A4P1-203ENST00000491915 TBC1D2Q9BYX2 928 aa10.76□□□□□ -0.69
COL6A4P1-203ENST00000491915 ASCC2Q9H1I8 757 aaPredicted RBP10.76□□□□□ -0.69
COL6A4P1-203ENST00000491915 AS3MTQ9HBK9 375 aa10.76□□□□□ -0.69
COL6A4P1-203ENST00000491915 GINM1Q9NU53 330 aa10.76□□□□□ -0.69
COL6A4P1-203ENST00000491915 DOCK1Q14185 1865 aa10.76□□□□□ -0.69
COL6A4P1-203ENST00000491915 PTPRFP10586 1907 aa10.76□□□□□ -0.69
COL6A4P1-203ENST00000491915 FOCADQ5VW36 1801 aa10.75□□□□□ -0.69
COL6A4P1-203ENST00000491915 C19orf81C9J6K1 198 aa10.75□□□□□ -0.69
COL6A4P1-203ENST00000491915 USP17L10C9JJH3 530 aa10.75□□□□□ -0.69
COL6A4P1-203ENST00000491915 USP17L12C9JPN9 530 aa10.75□□□□□ -0.69
COL6A4P1-203ENST00000491915 USP17L21D6R901 530 aa10.75□□□□□ -0.69
COL6A4P1-203ENST00000491915 GNRH1P01148 92 aa10.75□□□□□ -0.69
COL6A4P1-203ENST00000491915 HOXA7P31268 230 aaPredicted RBP10.75□□□□□ -0.69
COL6A4P1-203ENST00000491915 SEPT2Q15019 361 aa10.75□□□□□ -0.69
COL6A4P1-203ENST00000491915 ABCB5Q2M3G0 1257 aa10.75□□□□□ -0.69
COL6A4P1-203ENST00000491915 Q3C1V9 767 aa10.75□□□□□ -0.69
COL6A4P1-203ENST00000491915 ANKRD45Q5TZF3 282 aa10.75□□□□□ -0.69
COL6A4P1-203ENST00000491915 C12orf60Q5U649 245 aa10.75□□□□□ -0.69
COL6A4P1-203ENST00000491915 SIAH1Q8IUQ4 282 aa10.75□□□□□ -0.69
COL6A4P1-203ENST00000491915 KBTBD3Q8NAB2 608 aa10.75□□□□□ -0.69
COL6A4P1-203ENST00000491915 EXOC6Q8TAG9 804 aa10.75□□□□□ -0.69
COL6A4P1-203ENST00000491915 PI4K2BQ8TCG2 481 aa10.75□□□□□ -0.69
COL6A4P1-203ENST00000491915 ZNF333Q96JL9 665 aa10.75□□□□□ -0.69
COL6A4P1-203ENST00000491915 STRBPQ96SI9 672 aaKnown RBP10.75□□□□□ -0.69
COL6A4P1-203ENST00000491915 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.75□□□□□ -0.69
COL6A4P1-203ENST00000491915 ATP8A2Q9NTI2 1148 aa10.75□□□□□ -0.69
COL6A4P1-203ENST00000491915 MAST2Q6P0Q8 1798 aa10.75□□□□□ -0.69
COL6A4P1-203ENST00000491915 A0A1W2PRG0 241 aa10.74□□□□□ -0.69
COL6A4P1-203ENST00000491915 RNF113AO15541 343 aaKnown RBP10.74□□□□□ -0.69
COL6A4P1-203ENST00000491915 IGHDP01880 384 aa10.74□□□□□ -0.69
COL6A4P1-203ENST00000491915 HOXD10P28358 340 aa10.74□□□□□ -0.69
COL6A4P1-203ENST00000491915 PRKCZQ05513 592 aa10.74□□□□□ -0.69
COL6A4P1-203ENST00000491915 RAB3GAP1Q15042 981 aa10.74□□□□□ -0.69
COL6A4P1-203ENST00000491915 MTFR1Q15390 333 aa10.74□□□□□ -0.69
COL6A4P1-203ENST00000491915 SLC9C1Q4G0N8 1177 aa10.74□□□□□ -0.69
COL6A4P1-203ENST00000491915 CTR9Q6PD62 1173 aa10.74□□□□□ -0.69
COL6A4P1-203ENST00000491915 SMCR8Q8TEV9 937 aaPredicted RBP10.74□□□□□ -0.69
COL6A4P1-203ENST00000491915 SEC62Q99442 399 aaKnown RBP10.74□□□□□ -0.69
COL6A4P1-203ENST00000491915 TXNRD2Q9NNW7 524 aa10.74□□□□□ -0.69
COL6A4P1-203ENST00000491915 TMOD4Q9NZQ9 345 aa10.74□□□□□ -0.69
COL6A4P1-203ENST00000491915 RBPJLQ9UBG7 517 aa10.74□□□□□ -0.69
COL6A4P1-203ENST00000491915 GJD2Q9UKL4 321 aa10.74□□□□□ -0.69
COL6A4P1-203ENST00000491915 SLC4A4Q9Y6R1 1079 aa10.74□□□□□ -0.69
COL6A4P1-203ENST00000491915 GSG1L2A8MUP6 293 aa10.73□□□□□ -0.69
COL6A4P1-203ENST00000491915 M0R2C6 588 aa10.73□□□□□ -0.69
COL6A4P1-203ENST00000491915 AKR1B1P15121 316 aa10.73□□□□□ -0.69
COL6A4P1-203ENST00000491915 CDK8P49336 464 aa10.73□□□□□ -0.69
COL6A4P1-203ENST00000491915 FLT3LGP49771 235 aa10.73□□□□□ -0.69
COL6A4P1-203ENST00000491915 PRMT2P55345 433 aa10.73□□□□□ -0.69
COL6A4P1-203ENST00000491915 FCGRTP55899 365 aa10.73□□□□□ -0.69
COL6A4P1-203ENST00000491915 HDAC1Q13547 482 aaPredicted RBP10.73□□□□□ -0.69
COL6A4P1-203ENST00000491915 ZYXQ15942 572 aaKnown RBP10.73□□□□□ -0.69
COL6A4P1-203ENST00000491915 KIAA1755Q5JYT7 1200 aa10.73□□□□□ -0.69
COL6A4P1-203ENST00000491915 ZSCAN25Q6NSZ9 544 aa10.73□□□□□ -0.69
COL6A4P1-203ENST00000491915 USP17L2Q6R6M4 530 aa10.73□□□□□ -0.69
COL6A4P1-203ENST00000491915 NBPF11Q86T75 865 aa10.73□□□□□ -0.69
COL6A4P1-203ENST00000491915 CABP5Q9NP86 173 aa10.73□□□□□ -0.69
COL6A4P1-203ENST00000491915 SUPT16HQ9Y5B9 1047 aaKnown RBP10.73□□□□□ -0.69
COL6A4P1-203ENST00000491915 MYPNQ86TC9 1320 aa10.73□□□□□ -0.69
COL6A4P1-203ENST00000491915 SALL3Q9BXA9 1300 aa10.73□□□□□ -0.69
COL6A4P1-203ENST00000491915 ATAD5Q96QE3 1844 aa10.72□□□□□ -0.69
COL6A4P1-203ENST00000491915 GRK4P32298 578 aa10.72□□□□□ -0.69
COL6A4P1-203ENST00000491915 GCLCP48506 637 aaPredicted RBP10.72□□□□□ -0.69
COL6A4P1-203ENST00000491915 PABPC4Q13310 644 aaKnown RBP eCLIP10.72□□□□□ -0.69
COL6A4P1-203ENST00000491915 CLEC10AQ8IUN9 316 aa10.72□□□□□ -0.69
COL6A4P1-203ENST00000491915 RAET1EQ8TD07 263 aa10.72□□□□□ -0.69
COL6A4P1-203ENST00000491915 PNMA3Q9UL41 463 aa10.72□□□□□ -0.69
COL6A4P1-203ENST00000491915 TTC41PQ6P2S7 1318 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms