RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 SH3D19Q5HYK7 790 aa15.39■□□□□ 0.05
SEC61A1-206ENST00000491668 TATDN1Q6P1N9 297 aa15.39■□□□□ 0.05
SEC61A1-206ENST00000491668 CERS3Q8IU89 383 aa15.39■□□□□ 0.05
SEC61A1-206ENST00000491668 LCORLQ8N3X6 602 aa15.39■□□□□ 0.05
SEC61A1-206ENST00000491668 PROCA1Q8NCQ7 364 aaPredicted RBP15.39■□□□□ 0.05
SEC61A1-206ENST00000491668 SH3TC2Q8TF17 1288 aa15.39■□□□□ 0.05
SEC61A1-206ENST00000491668 DCTPP1Q9H773 170 aa15.39■□□□□ 0.05
SEC61A1-206ENST00000491668 PAG1Q9NWQ8 432 aa15.39■□□□□ 0.05
SEC61A1-206ENST00000491668 SRRDQ9UH36 339 aa15.39■□□□□ 0.05
SEC61A1-206ENST00000491668 ZBTB21Q9ULJ3 1066 aa15.39■□□□□ 0.05
SEC61A1-206ENST00000491668 MGAMO43451 1857 aa15.38■□□□□ 0.05
SEC61A1-206ENST00000491668 ASNSP08243 561 aa15.38■□□□□ 0.05
SEC61A1-206ENST00000491668 MTMR2Q13614 643 aa15.38■□□□□ 0.05
SEC61A1-206ENST00000491668 SLC9C1Q4G0N8 1177 aa15.38■□□□□ 0.05
SEC61A1-206ENST00000491668 CRACR2BQ8N4Y2 399 aaPredicted RBP15.38■□□□□ 0.05
SEC61A1-206ENST00000491668 EHD4Q9H223 541 aa15.38■□□□□ 0.05
SEC61A1-206ENST00000491668 FMNL1O95466 1100 aaPredicted RBP15.37■□□□□ 0.05
SEC61A1-206ENST00000491668 HLA-DOAP06340 250 aa15.37■□□□□ 0.05
SEC61A1-206ENST00000491668 SHMT1P34896 483 aa15.37■□□□□ 0.05
SEC61A1-206ENST00000491668 ADD2P35612 726 aa15.37■□□□□ 0.05
SEC61A1-206ENST00000491668 BACE1P56817 501 aa15.37■□□□□ 0.05
SEC61A1-206ENST00000491668 TBC1D2Q9BYX2 928 aa15.37■□□□□ 0.05
SEC61A1-206ENST00000491668 SERPINB13Q9UIV8 391 aa15.37■□□□□ 0.05
SEC61A1-206ENST00000491668 GABRQQ9UN88 632 aa15.37■□□□□ 0.05
SEC61A1-206ENST00000491668 NAV1Q8NEY1 1877 aa15.37■□□□□ 0.05
SEC61A1-206ENST00000491668 SMIM22K7EJ46 135 aa15.36■□□□□ 0.05
SEC61A1-206ENST00000491668 PRKAB2O43741 272 aa15.36■□□□□ 0.05
SEC61A1-206ENST00000491668 GH2P01242 217 aa15.36■□□□□ 0.05
SEC61A1-206ENST00000491668 CYP2D6P10635 497 aa15.36■□□□□ 0.05
SEC61A1-206ENST00000491668 EN2P19622 333 aaPredicted RBP15.36■□□□□ 0.05
SEC61A1-206ENST00000491668 PRMT2P55345 433 aa15.36■□□□□ 0.05
SEC61A1-206ENST00000491668 PRKCZQ05513 592 aa15.36■□□□□ 0.05
SEC61A1-206ENST00000491668 GABPAQ06546 454 aa15.36■□□□□ 0.05
SEC61A1-206ENST00000491668 TSHZ3Q63HK5 1081 aa15.36■□□□□ 0.05
SEC61A1-206ENST00000491668 POTEEQ6S8J3 1075 aa15.36■□□□□ 0.05
SEC61A1-206ENST00000491668 ANKRD13CQ8N6S4 541 aa15.36■□□□□ 0.05
SEC61A1-206ENST00000491668 SDR42E1Q8WUS8 393 aa15.36■□□□□ 0.05
SEC61A1-206ENST00000491668 ASCC2Q9H1I8 757 aaPredicted RBP15.36■□□□□ 0.05
SEC61A1-206ENST00000491668 ARMT1Q9H993 441 aa15.36■□□□□ 0.05
SEC61A1-206ENST00000491668 DCP1AQ9NPI6 582 aaPredicted RBP15.36■□□□□ 0.05
SEC61A1-206ENST00000491668 EMILIN3Q9NT22 766 aa15.36■□□□□ 0.05
SEC61A1-206ENST00000491668 DOCK3Q8IZD9 2030 aa15.35■□□□□ 0.05
SEC61A1-206ENST00000491668 PEX10O60683 326 aa15.35■□□□□ 0.05
SEC61A1-206ENST00000491668 MYCP01106 439 aaPredicted RBP15.35■□□□□ 0.05
SEC61A1-206ENST00000491668 GUCY1A2P33402 732 aa15.35■□□□□ 0.05
SEC61A1-206ENST00000491668 SMCR8Q8TEV9 937 aaPredicted RBP15.35■□□□□ 0.05
SEC61A1-206ENST00000491668 TRIM34Q9BYJ4 488 aa15.35■□□□□ 0.05
SEC61A1-206ENST00000491668 AS3MTQ9HBK9 375 aa15.35■□□□□ 0.05
SEC61A1-206ENST00000491668 GINM1Q9NU53 330 aa15.35■□□□□ 0.05
SEC61A1-206ENST00000491668 MYPNQ86TC9 1320 aa15.35■□□□□ 0.05
SEC61A1-206ENST00000491668 MBD4O95243 580 aa15.34■□□□□ 0.05
SEC61A1-206ENST00000491668 FCGRTP55899 365 aa15.34■□□□□ 0.05
SEC61A1-206ENST00000491668 MTFR1Q15390 333 aa15.34■□□□□ 0.05
SEC61A1-206ENST00000491668 TTC6Q86TZ1 520 aa15.34■□□□□ 0.05
SEC61A1-206ENST00000491668 CRNKL1Q9BZJ0 848 aaKnown RBP15.34■□□□□ 0.05
SEC61A1-206ENST00000491668 ECHDC1Q9NTX5 307 aa15.34■□□□□ 0.05
SEC61A1-206ENST00000491668 MCM9Q9NXL9 1143 aa15.34■□□□□ 0.05
SEC61A1-206ENST00000491668 MYH7P12883 1935 aa15.34■□□□□ 0.05
SEC61A1-206ENST00000491668 C19orf81C9J6K1 198 aa15.33■□□□□ 0.04
SEC61A1-206ENST00000491668 USP17L10C9JJH3 530 aa15.33■□□□□ 0.04
SEC61A1-206ENST00000491668 HOXA7P31268 230 aaPredicted RBP15.33■□□□□ 0.04
SEC61A1-206ENST00000491668 UBE3CQ15386 1083 aa15.33■□□□□ 0.04
SEC61A1-206ENST00000491668 FAM110CQ1W6H9 321 aa15.33■□□□□ 0.04
SEC61A1-206ENST00000491668 NBPF11Q86T75 865 aa15.33■□□□□ 0.04
SEC61A1-206ENST00000491668 SLC44A5Q8NCS7 719 aa15.33■□□□□ 0.04
SEC61A1-206ENST00000491668 ACER1Q8TDN7 264 aa15.33■□□□□ 0.04
SEC61A1-206ENST00000491668 OTUD7AQ8TE49 926 aaPredicted RBP15.33■□□□□ 0.04
SEC61A1-206ENST00000491668 P2RX7Q99572 595 aaKnown RBP15.33■□□□□ 0.04
SEC61A1-206ENST00000491668 PUS7LQ9H0K6 701 aaKnown RBP15.33■□□□□ 0.04
SEC61A1-206ENST00000491668 PNMA3Q9UL41 463 aa15.33■□□□□ 0.04
SEC61A1-206ENST00000491668 CYP2D7A0A087X1C5 515 aa15.32■□□□□ 0.04
SEC61A1-206ENST00000491668 POLR3DP05423 398 aaPredicted RBP15.32■□□□□ 0.04
SEC61A1-206ENST00000491668 HOXD10P28358 340 aa15.32■□□□□ 0.04
SEC61A1-206ENST00000491668 GRK4P32298 578 aa15.32■□□□□ 0.04
SEC61A1-206ENST00000491668 FLT3LGP49771 235 aa15.32■□□□□ 0.04
SEC61A1-206ENST00000491668 ABCB5Q2M3G0 1257 aa15.32■□□□□ 0.04
SEC61A1-206ENST00000491668 CERKLQ49MI3 558 aaPredicted RBP15.32■□□□□ 0.04
SEC61A1-206ENST00000491668 TXNRD2Q9NNW7 524 aa15.32■□□□□ 0.04
SEC61A1-206ENST00000491668 BAZ2AQ9UIF9 1905 aaKnown RBP15.32■□□□□ 0.04
SEC61A1-206ENST00000491668 TNPO2O14787 897 aaKnown RBP15.31■□□□□ 0.04
SEC61A1-206ENST00000491668 GCLCP48506 637 aaPredicted RBP15.31■□□□□ 0.04
SEC61A1-206ENST00000491668 PABPC4Q13310 644 aaKnown RBP eCLIP15.31■□□□□ 0.04
SEC61A1-206ENST00000491668 RAET1EQ8TD07 263 aa15.31■□□□□ 0.04
SEC61A1-206ENST00000491668 DYNLL2Q96FJ2 89 aa15.31■□□□□ 0.04
SEC61A1-206ENST00000491668 TMEM106CQ9BVX2 250 aa15.31■□□□□ 0.04
SEC61A1-206ENST00000491668 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.31■□□□□ 0.042e-13■■□□□ 12.7
SEC61A1-206ENST00000491668 RWDD1Q9H446 243 aaPredicted RBP15.31■□□□□ 0.04
SEC61A1-206ENST00000491668 TMOD4Q9NZQ9 345 aa15.31■□□□□ 0.04
SEC61A1-206ENST00000491668 MORF4L1Q9UBU8 362 aa15.31■□□□□ 0.04
SEC61A1-206ENST00000491668 PLXNB2O15031 1838 aa15.3■□□□□ 0.04
SEC61A1-206ENST00000491668 ELNP15502 786 aa15.3■□□□□ 0.04
SEC61A1-206ENST00000491668 HERVK_113P62684 666 aa15.3■□□□□ 0.04
SEC61A1-206ENST00000491668 SEPT2Q15019 361 aa15.3■□□□□ 0.04
SEC61A1-206ENST00000491668 RAB3GAP1Q15042 981 aa15.3■□□□□ 0.04
SEC61A1-206ENST00000491668 SHISA4Q96DD7 197 aa15.3■□□□□ 0.04
SEC61A1-206ENST00000491668 C12orf42Q96LP6 360 aa15.3■□□□□ 0.04
SEC61A1-206ENST00000491668 KIAA1683Q9H0B3 1180 aa15.3■□□□□ 0.04
SEC61A1-206ENST00000491668 RBPJLQ9UBG7 517 aa15.3■□□□□ 0.04
SEC61A1-206ENST00000491668 GJD2Q9UKL4 321 aa15.3■□□□□ 0.04
SEC61A1-206ENST00000491668 CEP290O15078 2479 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms