RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 MCTP1Q6DN14 999 aa6.43□□□□□ -1.38
RTN4-215ENST00000491592 SMYD4Q8IYR2 804 aaPredicted RBP6.43□□□□□ -1.38
RTN4-215ENST00000491592 EZH1Q92800 747 aaPredicted RBP6.43□□□□□ -1.38
RTN4-215ENST00000491592 WNT10AQ9GZT5 417 aa6.43□□□□□ -1.38
RTN4-215ENST00000491592 KCNF1Q9H3M0 494 aa6.43□□□□□ -1.38
RTN4-215ENST00000491592 SEMA6CQ9H3T2 930 aa6.43□□□□□ -1.38
RTN4-215ENST00000491592 BRMS1Q9HCU9 246 aa6.43□□□□□ -1.38
RTN4-215ENST00000491592 DAGLAQ9Y4D2 1042 aa6.43□□□□□ -1.38
RTN4-215ENST00000491592 CORINQ9Y5Q5 1042 aa6.43□□□□□ -1.38
RTN4-215ENST00000491592 HTR3BO95264 441 aa6.42□□□□□ -1.38
RTN4-215ENST00000491592 PGRP06401 933 aa6.42□□□□□ -1.38
RTN4-215ENST00000491592 GK5Q6ZS86 529 aa6.42□□□□□ -1.38
RTN4-215ENST00000491592 UBE3DQ7Z6J8 389 aa6.42□□□□□ -1.38
RTN4-215ENST00000491592 FBLIM1Q8WUP2 373 aa6.42□□□□□ -1.38
RTN4-215ENST00000491592 PRDM16Q9HAZ2 1276 aa6.42□□□□□ -1.38
RTN4-215ENST00000491592 GINM1Q9NU53 330 aa6.42□□□□□ -1.38
RTN4-215ENST00000491592 PCDHB14Q9Y5E9 798 aa6.42□□□□□ -1.38
RTN4-215ENST00000491592 CLSPNQ9HAW4 1339 aa6.42□□□□□ -1.38
RTN4-215ENST00000491592 PAX4O43316 350 aa6.41□□□□□ -1.38
RTN4-215ENST00000491592 PLCG1P19174 1290 aa6.41□□□□□ -1.38
RTN4-215ENST00000491592 FSTP19883 344 aa6.41□□□□□ -1.38
RTN4-215ENST00000491592 MCM4P33991 863 aa6.41□□□□□ -1.38
RTN4-215ENST00000491592 ZNF165P49910 485 aa6.41□□□□□ -1.38
RTN4-215ENST00000491592 COL9A2Q14055 689 aaPredicted RBP6.41□□□□□ -1.38
RTN4-215ENST00000491592 BEND4Q6ZU67 534 aa6.41□□□□□ -1.38
RTN4-215ENST00000491592 REXO1Q8N1G1 1221 aaKnown RBP6.41□□□□□ -1.38
RTN4-215ENST00000491592 MYH16Q9H6N6 1097 aa6.41□□□□□ -1.38
RTN4-215ENST00000491592 FBRSQ9HAH7 460 aa6.41□□□□□ -1.38
RTN4-215ENST00000491592 ADAM30Q9UKF2 790 aa6.41□□□□□ -1.38
RTN4-215ENST00000491592 EFR3BQ9Y2G0 817 aa6.41□□□□□ -1.38
RTN4-215ENST00000491592 PRR36Q9H6K5 1346 aa6.41□□□□□ -1.38
RTN4-215ENST00000491592 COL17A1Q9UMD9 1497 aaPredicted RBP6.41□□□□□ -1.38
RTN4-215ENST00000491592 FAM95CA0A1B0GW59 222 aa6.4□□□□□ -1.38
RTN4-215ENST00000491592 GSC2O15499 205 aa6.4□□□□□ -1.38
RTN4-215ENST00000491592 NFICP08651 508 aa6.4□□□□□ -1.38
RTN4-215ENST00000491592 SOX9P48436 509 aa6.4□□□□□ -1.38
RTN4-215ENST00000491592 NASPP49321 788 aaPredicted RBP6.4□□□□□ -1.38
RTN4-215ENST00000491592 MAP7Q14244 749 aa6.4□□□□□ -1.38
RTN4-215ENST00000491592 TMED8Q6PL24 325 aaPredicted RBP6.4□□□□□ -1.38
RTN4-215ENST00000491592 CDC37L1Q7L3B6 337 aa6.4□□□□□ -1.38
RTN4-215ENST00000491592 EXOC8Q8IYI6 725 aa6.4□□□□□ -1.38
RTN4-215ENST00000491592 KCT2Q8NC54 265 aa6.4□□□□□ -1.38
RTN4-215ENST00000491592 ZNF507Q8TCN5 953 aa6.4□□□□□ -1.38
RTN4-215ENST00000491592 HIRIP3Q9BW71 556 aaPredicted RBP6.4□□□□□ -1.38
RTN4-215ENST00000491592 SSU72Q9NP77 194 aaKnown RBP6.4□□□□□ -1.38
RTN4-215ENST00000491592 REV1Q9UBZ9 1251 aa6.4□□□□□ -1.38
RTN4-215ENST00000491592 ZNRF3Q9ULT6 936 aa6.4□□□□□ -1.38
RTN4-215ENST00000491592 PPT2Q9UMR5 302 aa6.4□□□□□ -1.38
RTN4-215ENST00000491592 RAXQ9Y2V3 346 aa6.4□□□□□ -1.38
RTN4-215ENST00000491592 RB1CC1Q8TDY2 1594 aa6.4□□□□□ -1.39
RTN4-215ENST00000491592 LOC102724159A0A0B4J2E5 919 aa6.39□□□□□ -1.39
RTN4-215ENST00000491592 DYNC1LI2O43237 492 aaPredicted RBP6.39□□□□□ -1.39
RTN4-215ENST00000491592 ATE1O95260 518 aa6.39□□□□□ -1.39
RTN4-215ENST00000491592 FGRP09769 529 aa6.39□□□□□ -1.39
RTN4-215ENST00000491592 ATF4P18848 351 aaPredicted RBP6.39□□□□□ -1.39
RTN4-215ENST00000491592 PTMSP20962 102 aa6.39□□□□□ -1.39
RTN4-215ENST00000491592 DNAJA1P31689 397 aaKnown RBP6.39□□□□□ -1.39
RTN4-215ENST00000491592 TXKP42681 527 aa6.39□□□□□ -1.39
RTN4-215ENST00000491592 CLCQ05315 142 aa6.39□□□□□ -1.39
RTN4-215ENST00000491592 PWP2Q15269 919 aaKnown RBP6.39□□□□□ -1.39
RTN4-215ENST00000491592 NKG7Q16617 165 aa6.39□□□□□ -1.39
RTN4-215ENST00000491592 TMEM201Q5SNT2 666 aa6.39□□□□□ -1.39
RTN4-215ENST00000491592 PAOXQ6QHF9 649 aa6.39□□□□□ -1.39
RTN4-215ENST00000491592 CCDC81Q6ZN84 652 aa6.39□□□□□ -1.39
RTN4-215ENST00000491592 CLEC10AQ8IUN9 316 aa6.39□□□□□ -1.39
RTN4-215ENST00000491592 HID1Q8IV36 788 aa6.39□□□□□ -1.39
RTN4-215ENST00000491592 TEX2Q8IWB9 1127 aa6.39□□□□□ -1.39
RTN4-215ENST00000491592 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.39□□□□□ -1.39
RTN4-215ENST00000491592 SLC43A3Q8NBI5 491 aa6.39□□□□□ -1.39
RTN4-215ENST00000491592 UBXN4Q92575 508 aa6.39□□□□□ -1.39
RTN4-215ENST00000491592 ACSF2Q96CM8 615 aaPredicted RBP6.39□□□□□ -1.39
RTN4-215ENST00000491592 SEC16BQ96JE7 1060 aa6.39□□□□□ -1.39
RTN4-215ENST00000491592 C7orf69Q9H7B7 122 aa6.39□□□□□ -1.39
RTN4-215ENST00000491592 EHMT1Q9H9B1 1298 aa6.39□□□□□ -1.39
RTN4-215ENST00000491592 LGR6Q9HBX8 967 aa6.39□□□□□ -1.39
RTN4-215ENST00000491592 TJP2Q9UDY2 1190 aa6.39□□□□□ -1.39
RTN4-215ENST00000491592 PCOLCE2Q9UKZ9 415 aa6.39□□□□□ -1.39
RTN4-215ENST00000491592 RIPOR2Q9Y4F9 1068 aa6.39□□□□□ -1.39
RTN4-215ENST00000491592 HMX2A2RU54 273 aa6.38□□□□□ -1.39
RTN4-215ENST00000491592 CAP2P40123 477 aa6.38□□□□□ -1.39
RTN4-215ENST00000491592 ARID5AQ03989 594 aa6.38□□□□□ -1.39
RTN4-215ENST00000491592 SLBPQ14493 270 aaKnown RBP eCLIP6.38□□□□□ -1.39
RTN4-215ENST00000491592 NFKBIBQ15653 356 aa6.38□□□□□ -1.39
RTN4-215ENST00000491592 ARMCX6Q7L4S7 300 aa6.38□□□□□ -1.39
RTN4-215ENST00000491592 VPS37DQ86XT2 251 aa6.38□□□□□ -1.39
RTN4-215ENST00000491592 KRTAP19-1Q8IUB9 90 aa6.38□□□□□ -1.39
RTN4-215ENST00000491592 MRPL41Q8IXM3 137 aaKnown RBP6.38□□□□□ -1.39
RTN4-215ENST00000491592 FAM13CQ8NE31 585 aa6.38□□□□□ -1.39
RTN4-215ENST00000491592 TMEM87BQ96K49 555 aa6.38□□□□□ -1.39
RTN4-215ENST00000491592 PKNOX2Q96KN3 472 aa6.38□□□□□ -1.39
RTN4-215ENST00000491592 FERD3LQ96RJ6 166 aa6.38□□□□□ -1.39
RTN4-215ENST00000491592 DPH2Q9BQC3 489 aaPredicted RBP6.38□□□□□ -1.39
RTN4-215ENST00000491592 FAM83CQ9BQN1 747 aa6.38□□□□□ -1.39
RTN4-215ENST00000491592 KLHL3Q9UH77 587 aa6.38□□□□□ -1.39
RTN4-215ENST00000491592 RSF1Q96T23 1441 aaPredicted RBP6.37□□□□□ -1.39
RTN4-215ENST00000491592 MEIS3P2A8K0S8 358 aa6.37□□□□□ -1.39
RTN4-215ENST00000491592 HMGB1P1B2RPK0 211 aaPredicted RBP6.37□□□□□ -1.39
RTN4-215ENST00000491592 MARCH6O60337 910 aa6.37□□□□□ -1.39
RTN4-215ENST00000491592 DNAJA2O60884 412 aa6.37□□□□□ -1.39
RTN4-215ENST00000491592 IMPDH2P12268 514 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms