RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 GUCD1Q96NT3 240 aa13.99□□□□□ -0.17
SRGAP3-210ENST00000491467 NACAP1Q9BZK3 213 aa13.99□□□□□ -0.17
SRGAP3-210ENST00000491467 SCAND2PQ9GZW5 306 aaPredicted RBP13.99□□□□□ -0.17
SRGAP3-210ENST00000491467 CNNM2Q9H8M5 875 aa13.99□□□□□ -0.17
SRGAP3-210ENST00000491467 MINPP1Q9UNW1 487 aa13.99□□□□□ -0.17
SRGAP3-210ENST00000491467 CACNA1AO00555 2505 aa13.99□□□□□ -0.17
SRGAP3-210ENST00000491467 VPS37CA5D8V6 355 aaPredicted RBP13.98□□□□□ -0.17
SRGAP3-210ENST00000491467 PDIA3P30101 505 aaKnown RBP13.98□□□□□ -0.17
SRGAP3-210ENST00000491467 BMP8BP34820 402 aa13.98□□□□□ -0.17
SRGAP3-210ENST00000491467 ARHGEF6Q15052 776 aa13.98□□□□□ -0.17
SRGAP3-210ENST00000491467 NAA16Q6N069 864 aaPredicted RBP13.98□□□□□ -0.17
SRGAP3-210ENST00000491467 LRSAM1Q6UWE0 723 aa13.98□□□□□ -0.17
SRGAP3-210ENST00000491467 IFNL1Q8IU54 200 aa13.98□□□□□ -0.17
SRGAP3-210ENST00000491467 FAM161BQ96MY7 647 aa13.98□□□□□ -0.17
SRGAP3-210ENST00000491467 MUC3AQ02505 3323 aa13.98□□□□□ -0.17
SRGAP3-210ENST00000491467 INHBEP58166 350 aa13.97□□□□□ -0.17
SRGAP3-210ENST00000491467 CAP1Q01518 475 aa13.97□□□□□ -0.17
SRGAP3-210ENST00000491467 SCRN1Q12765 414 aa13.97□□□□□ -0.17
SRGAP3-210ENST00000491467 STK3Q13188 491 aa13.97□□□□□ -0.17
SRGAP3-210ENST00000491467 CRY2Q49AN0 593 aa13.97□□□□□ -0.17
SRGAP3-210ENST00000491467 TTLL5Q6EMB2 1281 aa13.97□□□□□ -0.17
SRGAP3-210ENST00000491467 FBXO33Q7Z6M2 555 aa13.97□□□□□ -0.17
SRGAP3-210ENST00000491467 MAGEB6Q8N7X4 407 aa13.97□□□□□ -0.17
SRGAP3-210ENST00000491467 NSUN7Q8NE18 718 aaKnown RBP13.97□□□□□ -0.17
SRGAP3-210ENST00000491467 ANP32BQ92688 251 aaKnown RBP13.97□□□□□ -0.17
SRGAP3-210ENST00000491467 KRT23Q9C075 422 aa13.97□□□□□ -0.17
SRGAP3-210ENST00000491467 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.97□□□□□ -0.17
SRGAP3-210ENST00000491467 LRP2BPQ9P2M1 347 aa13.97□□□□□ -0.17
SRGAP3-210ENST00000491467 LAMA2P24043 3122 aaKnown RBP13.96□□□□□ -0.17
SRGAP3-210ENST00000491467 TTC28Q96AY4 2481 aa13.96□□□□□ -0.17
SRGAP3-210ENST00000491467 YDJCA8MPS7 323 aa13.96□□□□□ -0.17
SRGAP3-210ENST00000491467 H3BQV1 296 aa13.96□□□□□ -0.17
SRGAP3-210ENST00000491467 PSMD14O00487 310 aa13.96□□□□□ -0.17
SRGAP3-210ENST00000491467 PRC1O43663 620 aa13.96□□□□□ -0.17
SRGAP3-210ENST00000491467 APPP05067 770 aa13.96□□□□□ -0.17
SRGAP3-210ENST00000491467 APOBRQ0VD83 1088 aa13.96□□□□□ -0.17
SRGAP3-210ENST00000491467 ANGEL2Q5VTE6 544 aaKnown RBP13.96□□□□□ -0.17
SRGAP3-210ENST00000491467 VPS37DQ86XT2 251 aa13.96□□□□□ -0.17
SRGAP3-210ENST00000491467 IFNL3Q8IZI9 196 aa13.96□□□□□ -0.17
SRGAP3-210ENST00000491467 NKX2-3Q8TAU0 364 aa13.96□□□□□ -0.17
SRGAP3-210ENST00000491467 RBM17Q96I25 401 aaKnown RBP13.96□□□□□ -0.17
SRGAP3-210ENST00000491467 NAPBQ9H115 298 aa13.96□□□□□ -0.17
SRGAP3-210ENST00000491467 CFAP45Q9UL16 551 aa13.96□□□□□ -0.17
SRGAP3-210ENST00000491467 CNPY2Q9Y2B0 182 aa13.96□□□□□ -0.17
SRGAP3-210ENST00000491467 MYH6P13533 1939 aa13.96□□□□□ -0.18
SRGAP3-210ENST00000491467 ECM2O94769 699 aaPredicted RBP13.95□□□□□ -0.18
SRGAP3-210ENST00000491467 PCP11498 1178 aaKnown RBP13.95□□□□□ -0.18
SRGAP3-210ENST00000491467 NT5C2P49902 561 aa13.95□□□□□ -0.18
SRGAP3-210ENST00000491467 KIAA2012Q0VF49 1180 aa13.95□□□□□ -0.18
SRGAP3-210ENST00000491467 COL9A3Q14050 684 aaPredicted RBP13.95□□□□□ -0.18
SRGAP3-210ENST00000491467 GIMAP6Q6P9H5 292 aa13.95□□□□□ -0.18
SRGAP3-210ENST00000491467 DPP8Q6V1X1 898 aaPredicted RBP13.95□□□□□ -0.18
SRGAP3-210ENST00000491467 GAS2L3Q86XJ1 694 aa13.95□□□□□ -0.18
SRGAP3-210ENST00000491467 TMTC2Q8N394 836 aa13.95□□□□□ -0.18
SRGAP3-210ENST00000491467 MAFAQ8NHW3 353 aaPredicted RBP13.95□□□□□ -0.18
SRGAP3-210ENST00000491467 GDF15Q99988 308 aa13.95□□□□□ -0.18
SRGAP3-210ENST00000491467 RNF41Q9H4P4 317 aaPredicted RBP13.95□□□□□ -0.18
SRGAP3-210ENST00000491467 TMEM63CQ9P1W3 806 aa13.95□□□□□ -0.18
SRGAP3-210ENST00000491467 LEMD3Q9Y2U8 911 aa13.95□□□□□ -0.18
SRGAP3-210ENST00000491467 ALPK3Q96L96 1907 aa13.95□□□□□ -0.18
SRGAP3-210ENST00000491467 SALL1Q9NSC2 1324 aa13.94□□□□□ -0.18
SRGAP3-210ENST00000491467 MANSC4A6NHS7 340 aaPredicted RBP13.94□□□□□ -0.18
SRGAP3-210ENST00000491467 MBD4O95243 580 aa13.94□□□□□ -0.18
SRGAP3-210ENST00000491467 HOXA10P31260 410 aaPredicted RBP13.94□□□□□ -0.18
SRGAP3-210ENST00000491467 LIFRP42702 1097 aa13.94□□□□□ -0.18
SRGAP3-210ENST00000491467 DNM1Q05193 864 aaKnown RBP13.94□□□□□ -0.18
SRGAP3-210ENST00000491467 CRHR2Q13324 411 aa13.94□□□□□ -0.18
SRGAP3-210ENST00000491467 CCDC183Q5T5S1 534 aa13.94□□□□□ -0.18
SRGAP3-210ENST00000491467 PRAMEF18Q5VWM3 479 aa13.94□□□□□ -0.18
SRGAP3-210ENST00000491467 SPRYD7Q5W111 196 aa13.94□□□□□ -0.18
SRGAP3-210ENST00000491467 SPTY2D1Q68D10 685 aaPredicted RBP13.94□□□□□ -0.18
SRGAP3-210ENST00000491467 CPLX2Q6PUV4 134 aaKnown RBP13.94□□□□□ -0.18
SRGAP3-210ENST00000491467 C15orf52Q6ZUT6 534 aaKnown RBP13.94□□□□□ -0.18
SRGAP3-210ENST00000491467 ALYREFQ86V81 257 aaKnown RBP13.94□□□□□ -0.18
SRGAP3-210ENST00000491467 FAM84BQ96KN1 310 aaPredicted RBP13.94□□□□□ -0.18
SRGAP3-210ENST00000491467 DUOX1Q9NRD9 1551 aa13.94□□□□□ -0.18
SRGAP3-210ENST00000491467 ANGEL1Q9UNK9 670 aaKnown RBP13.94□□□□□ -0.18
SRGAP3-210ENST00000491467 MYH2Q9UKX2 1941 aa13.94□□□□□ -0.18
SRGAP3-210ENST00000491467 LAMB1P07942 1786 aa13.94□□□□□ -0.18
SRGAP3-210ENST00000491467 GSG1L2A8MUP6 293 aa13.93□□□□□ -0.18
SRGAP3-210ENST00000491467 IGF2BP3O00425 579 aaKnown RBP eCLIP13.93□□□□□ -0.18
SRGAP3-210ENST00000491467 CDKL5O76039 1030 aa13.93□□□□□ -0.18
SRGAP3-210ENST00000491467 HIBADHP31937 336 aaKnown RBP13.93□□□□□ -0.18
SRGAP3-210ENST00000491467 RCAN1P53805 252 aa13.93□□□□□ -0.18
SRGAP3-210ENST00000491467 HAND2P61296 217 aa13.93□□□□□ -0.18
SRGAP3-210ENST00000491467 MTFR1Q15390 333 aa13.93□□□□□ -0.18
SRGAP3-210ENST00000491467 AKNAD1Q5T1N1 836 aa13.93□□□□□ -0.18
SRGAP3-210ENST00000491467 C3orf67Q6ZVT6 689 aa13.93□□□□□ -0.18
SRGAP3-210ENST00000491467 UBE2Q1Q7Z7E8 422 aa13.93□□□□□ -0.18
SRGAP3-210ENST00000491467 SGMS1Q86VZ5 419 aa13.93□□□□□ -0.18
SRGAP3-210ENST00000491467 TDHQ8IZJ6 230 aa13.93□□□□□ -0.18
SRGAP3-210ENST00000491467 CELF1Q92879 486 aaKnown RBP13.93□□□□□ -0.18
SRGAP3-210ENST00000491467 CRAMP1Q96RY5 1269 aa13.93□□□□□ -0.18
SRGAP3-210ENST00000491467 RTFDC1Q9BY42 306 aaPredicted RBP13.93□□□□□ -0.18
SRGAP3-210ENST00000491467 LRRC2Q9BYS8 371 aa13.93□□□□□ -0.18
SRGAP3-210ENST00000491467 ANAPC4Q9UJX5 808 aa13.93□□□□□ -0.18
SRGAP3-210ENST00000491467 SCAF8Q9UPN6 1271 aaKnown RBP13.93□□□□□ -0.18
SRGAP3-210ENST00000491467 COL4A1P02462 1669 aa13.93□□□□□ -0.18
SRGAP3-210ENST00000491467 BAZ2AQ9UIF9 1905 aaKnown RBP13.93□□□□□ -0.18
SRGAP3-210ENST00000491467 MAGEB6P1A0A0J9YX57 407 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms