RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 PLCD1P51178 756 aa21.83■■□□□ 1.09
HMGN1-219ENST00000491183 SLFNL1Q499Z3 407 aa21.83■■□□□ 1.09
HMGN1-219ENST00000491183 TATDN1Q6P1N9 297 aa21.83■■□□□ 1.09
HMGN1-219ENST00000491183 SMCR8Q8TEV9 937 aaPredicted RBP21.83■■□□□ 1.09
HMGN1-219ENST00000491183 HAUS7Q99871 368 aa21.83■■□□□ 1.09
HMGN1-219ENST00000491183 DCTPP1Q9H773 170 aa21.83■■□□□ 1.09
HMGN1-219ENST00000491183 GINM1Q9NU53 330 aa21.83■■□□□ 1.09
HMGN1-219ENST00000491183 FCGRTP55899 365 aa21.82■■□□□ 1.08
HMGN1-219ENST00000491183 BACE1P56817 501 aa21.82■■□□□ 1.08
HMGN1-219ENST00000491183 MTMR2Q13614 643 aa21.82■■□□□ 1.08
HMGN1-219ENST00000491183 TTC6Q86TZ1 520 aa21.82■■□□□ 1.08
HMGN1-219ENST00000491183 EHD4Q9H223 541 aa21.82■■□□□ 1.08
HMGN1-219ENST00000491183 SERPINB13Q9UIV8 391 aa21.82■■□□□ 1.08
HMGN1-219ENST00000491183 MYPNQ86TC9 1320 aa21.81■■□□□ 1.08
HMGN1-219ENST00000491183 MYCP01106 439 aaPredicted RBP21.81■■□□□ 1.08
HMGN1-219ENST00000491183 ADD2P35612 726 aa21.81■■□□□ 1.08
HMGN1-219ENST00000491183 PRKCZQ05513 592 aa21.81■■□□□ 1.08
HMGN1-219ENST00000491183 LCORLQ8N3X6 602 aa21.81■■□□□ 1.08
HMGN1-219ENST00000491183 ANKRD13CQ8N6S4 541 aa21.81■■□□□ 1.08
HMGN1-219ENST00000491183 TMEM106CQ9BVX2 250 aa21.81■■□□□ 1.08
HMGN1-219ENST00000491183 ASCC2Q9H1I8 757 aaPredicted RBP21.81■■□□□ 1.08
HMGN1-219ENST00000491183 PNMA3Q9UL41 463 aa21.81■■□□□ 1.08
HMGN1-219ENST00000491183 GABRQQ9UN88 632 aa21.81■■□□□ 1.08
HMGN1-219ENST00000491183 DDX60LQ5H9U9 1706 aaKnown RBP21.8■■□□□ 1.08
HMGN1-219ENST00000491183 GH2P01242 217 aa21.8■■□□□ 1.08
HMGN1-219ENST00000491183 CHGBP05060 677 aa21.8■■□□□ 1.08
HMGN1-219ENST00000491183 EVX2Q03828 476 aa21.8■■□□□ 1.08
HMGN1-219ENST00000491183 CRNKL1Q9BZJ0 848 aaKnown RBP21.8■■□□□ 1.08
HMGN1-219ENST00000491183 PDE4DIPQ5VU43 2346 aa21.8■■□□□ 1.08
HMGN1-219ENST00000491183 C19orf81C9J6K1 198 aa21.79■■□□□ 1.08
HMGN1-219ENST00000491183 USP17L10C9JJH3 530 aa21.79■■□□□ 1.08
HMGN1-219ENST00000491183 PABPC4Q13310 644 aaKnown RBP eCLIP21.79■■□□□ 1.088e-10■■□□□ 13.3
HMGN1-219ENST00000491183 RAET1EQ8TD07 263 aa21.79■■□□□ 1.08
HMGN1-219ENST00000491183 SDR42E1Q8WUS8 393 aa21.79■■□□□ 1.08
HMGN1-219ENST00000491183 ARMT1Q9H993 441 aa21.79■■□□□ 1.08
HMGN1-219ENST00000491183 PCDHB15Q9Y5E8 787 aa21.79■■□□□ 1.08
HMGN1-219ENST00000491183 NAV1Q8NEY1 1877 aa21.79■■□□□ 1.08
HMGN1-219ENST00000491183 DOCK3Q8IZD9 2030 aa21.79■■□□□ 1.08
HMGN1-219ENST00000491183 POLR3DP05423 398 aaPredicted RBP21.78■■□□□ 1.08
HMGN1-219ENST00000491183 HOXA7P31268 230 aaPredicted RBP21.78■■□□□ 1.08
HMGN1-219ENST00000491183 GRK4P32298 578 aa21.78■■□□□ 1.08
HMGN1-219ENST00000491183 SHMT1P34896 483 aa21.78■■□□□ 1.08
HMGN1-219ENST00000491183 GABPAQ06546 454 aa21.78■■□□□ 1.08
HMGN1-219ENST00000491183 DCP1AQ9NPI6 582 aaPredicted RBP21.78■■□□□ 1.08
HMGN1-219ENST00000491183 TMOD4Q9NZQ9 345 aa21.78■■□□□ 1.08
HMGN1-219ENST00000491183 PRKAB2O43741 272 aa21.77■■□□□ 1.08
HMGN1-219ENST00000491183 GCLCP48506 637 aaPredicted RBP21.77■■□□□ 1.08
HMGN1-219ENST00000491183 MTFR1Q15390 333 aa21.77■■□□□ 1.08
HMGN1-219ENST00000491183 FAM110CQ1W6H9 321 aa21.77■■□□□ 1.08
HMGN1-219ENST00000491183 CERKLQ49MI3 558 aaPredicted RBP21.77■■□□□ 1.08
HMGN1-219ENST00000491183 EMILIN3Q9NT22 766 aa21.77■■□□□ 1.08
HMGN1-219ENST00000491183 MCM9Q9NXL9 1143 aa21.77■■□□□ 1.08
HMGN1-219ENST00000491183 BRCA2P51587 3418 aa21.76■■□□□ 1.07
HMGN1-219ENST00000491183 TNPO2O14787 897 aaKnown RBP21.76■■□□□ 1.07
HMGN1-219ENST00000491183 FLT3LGP49771 235 aa21.76■■□□□ 1.07
HMGN1-219ENST00000491183 RRP1P56182 461 aaKnown RBP21.76■■□□□ 1.07
HMGN1-219ENST00000491183 P2RX7Q99572 595 aaKnown RBP21.76■■□□□ 1.07
HMGN1-219ENST00000491183 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.76■■□□□ 1.07
HMGN1-219ENST00000491183 ECHDC1Q9NTX5 307 aa21.76■■□□□ 1.07
HMGN1-219ENST00000491183 MYH7P12883 1935 aa21.76■■□□□ 1.07
HMGN1-219ENST00000491183 MBD4O95243 580 aa21.75■■□□□ 1.07
HMGN1-219ENST00000491183 CYP2D6P10635 497 aa21.75■■□□□ 1.07
HMGN1-219ENST00000491183 UBE3CQ15386 1083 aa21.75■■□□□ 1.07
HMGN1-219ENST00000491183 ABCB5Q2M3G0 1257 aa21.75■■□□□ 1.07
HMGN1-219ENST00000491183 GUCY1A2P33402 732 aa21.74■■□□□ 1.07
HMGN1-219ENST00000491183 RAB3GAP1Q15042 981 aa21.74■■□□□ 1.07
HMGN1-219ENST00000491183 USP17L2Q6R6M4 530 aa21.74■■□□□ 1.07
HMGN1-219ENST00000491183 MORF4L1Q9UBU8 362 aa21.74■■□□□ 1.07
HMGN1-219ENST00000491183 BAZ2AQ9UIF9 1905 aaKnown RBP21.73■■□□□ 1.07
HMGN1-219ENST00000491183 PEX10O60683 326 aa21.73■■□□□ 1.07
HMGN1-219ENST00000491183 IRX3P78415 501 aaPredicted RBP21.73■■□□□ 1.07
HMGN1-219ENST00000491183 IRF5Q13568 498 aa21.73■■□□□ 1.07
HMGN1-219ENST00000491183 POTEEQ6S8J3 1075 aa21.73■■□□□ 1.07
HMGN1-219ENST00000491183 SLAIN1Q8ND83 568 aa21.73■■□□□ 1.07
HMGN1-219ENST00000491183 ACER1Q8TDN7 264 aa21.73■■□□□ 1.07
HMGN1-219ENST00000491183 SMIM22K7EJ46 135 aa21.72■■□□□ 1.07
HMGN1-219ENST00000491183 ADCY3O60266 1144 aa21.72■■□□□ 1.07
HMGN1-219ENST00000491183 HERVK_113P62684 666 aa21.72■■□□□ 1.07
HMGN1-219ENST00000491183 ZYXQ15942 572 aaKnown RBP21.72■■□□□ 1.07
HMGN1-219ENST00000491183 PRPF38BQ5VTL8 546 aaKnown RBP21.72■■□□□ 1.07
HMGN1-219ENST00000491183 TSHZ3Q63HK5 1081 aa21.72■■□□□ 1.07
HMGN1-219ENST00000491183 SLC44A5Q8NCS7 719 aa21.72■■□□□ 1.07
HMGN1-219ENST00000491183 COA7Q96BR5 231 aa21.72■■□□□ 1.07
HMGN1-219ENST00000491183 C12orf42Q96LP6 360 aa21.72■■□□□ 1.07
HMGN1-219ENST00000491183 PUS7LQ9H0K6 701 aaKnown RBP21.72■■□□□ 1.07
HMGN1-219ENST00000491183 TXNRD2Q9NNW7 524 aa21.72■■□□□ 1.07
HMGN1-219ENST00000491183 CABP5Q9NP86 173 aa21.72■■□□□ 1.07
HMGN1-219ENST00000491183 ATP8A2Q9NTI2 1148 aa21.72■■□□□ 1.07
HMGN1-219ENST00000491183 MKI67P46013 3256 aaKnown RBP21.72■■□□□ 1.07
HMGN1-219ENST00000491183 CCL5P13501 91 aa21.71■■□□□ 1.07
HMGN1-219ENST00000491183 ELNP15502 786 aa21.71■■□□□ 1.07
HMGN1-219ENST00000491183 SEPT2Q15019 361 aa21.71■■□□□ 1.07
HMGN1-219ENST00000491183 DYNLL2Q96FJ2 89 aa21.71■■□□□ 1.07
HMGN1-219ENST00000491183 KIAA1683Q9H0B3 1180 aa21.71■■□□□ 1.07
HMGN1-219ENST00000491183 RBPJLQ9UBG7 517 aa21.71■■□□□ 1.07
HMGN1-219ENST00000491183 BIN2Q9UBW5 565 aaPredicted RBP21.71■■□□□ 1.07
HMGN1-219ENST00000491183 GJD2Q9UKL4 321 aa21.71■■□□□ 1.07
HMGN1-219ENST00000491183 CYP2D7A0A087X1C5 515 aa21.7■■□□□ 1.06
HMGN1-219ENST00000491183 Q3C1V9 767 aa21.7■■□□□ 1.06
HMGN1-219ENST00000491183 ZSCAN25Q6NSZ9 544 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms