RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 CERKLQ49MI3 558 aaPredicted RBP21.99■■□□□ 1.11
MCF2L-230ENST00000491028 MIGA2Q7L4E1 593 aa21.99■■□□□ 1.11
MCF2L-230ENST00000491028 MTA3Q9BTC8 594 aa21.99■■□□□ 1.11
MCF2L-230ENST00000491028 CYP46A1Q9Y6A2 500 aa21.99■■□□□ 1.11
MCF2L-230ENST00000491028 DOCK1Q14185 1865 aa21.98■■□□□ 1.11
MCF2L-230ENST00000491028 PPP1R12BO60237 982 aaPredicted RBP21.98■■□□□ 1.11
MCF2L-230ENST00000491028 SLURP2P0DP57 97 aa21.98■■□□□ 1.11
MCF2L-230ENST00000491028 MCM5P33992 734 aa21.98■■□□□ 1.11
MCF2L-230ENST00000491028 RUFY3Q7L099 469 aa21.98■■□□□ 1.11
MCF2L-230ENST00000491028 DHX32Q7L7V1 743 aaKnown RBP21.98■■□□□ 1.11
MCF2L-230ENST00000491028 TRPM7Q96QT4 1865 aa21.98■■□□□ 1.11
MCF2L-230ENST00000491028 TSPY3P0CV98 308 aa21.97■■□□□ 1.11
MCF2L-230ENST00000491028 TSPY8P0CW00 308 aa21.97■■□□□ 1.11
MCF2L-230ENST00000491028 RPS6KB1P23443 525 aa21.97■■□□□ 1.11
MCF2L-230ENST00000491028 TFAP4Q01664 338 aa21.97■■□□□ 1.11
MCF2L-230ENST00000491028 NEDD1Q8NHV4 660 aa21.97■■□□□ 1.11
MCF2L-230ENST00000491028 GINM1Q9NU53 330 aa21.97■■□□□ 1.11
MCF2L-230ENST00000491028 ZSWIM5Q9P217 1185 aa21.97■■□□□ 1.11
MCF2L-230ENST00000491028 ZNF112Q9UJU3 913 aa21.97■■□□□ 1.11
MCF2L-230ENST00000491028 OTOFQ9HC10 1997 aa21.96■■□□□ 1.11
MCF2L-230ENST00000491028 PHF20L1A8MW92 1017 aa21.96■■□□□ 1.11
MCF2L-230ENST00000491028 DLK2Q6UY11 383 aa21.96■■□□□ 1.11
MCF2L-230ENST00000491028 CYB5R4Q7L1T6 521 aa21.96■■□□□ 1.11
MCF2L-230ENST00000491028 IQCA1Q86XH1 822 aa21.96■■□□□ 1.11
MCF2L-230ENST00000491028 SMC1BQ8NDV3 1235 aa21.96■■□□□ 1.11
MCF2L-230ENST00000491028 RBM46Q8TBY0 533 aaKnown RBP21.96■■□□□ 1.11
MCF2L-230ENST00000491028 UPF3BQ9BZI7 483 aaKnown RBP21.96■■□□□ 1.11
MCF2L-230ENST00000491028 TRAF5O00463 557 aa21.95■■□□□ 1.1
MCF2L-230ENST00000491028 PRC1O43663 620 aa21.95■■□□□ 1.1
MCF2L-230ENST00000491028 ITGBL1O95965 494 aaPredicted RBP21.95■■□□□ 1.1
MCF2L-230ENST00000491028 AKR1B1P15121 316 aa21.95■■□□□ 1.1
MCF2L-230ENST00000491028 CAP2P40123 477 aa21.95■■□□□ 1.1
MCF2L-230ENST00000491028 ANTXR2P58335 489 aa21.95■■□□□ 1.1
MCF2L-230ENST00000491028 EXOSC10Q01780 885 aaKnown RBP21.95■■□□□ 1.1
MCF2L-230ENST00000491028 SART3Q15020 963 aaKnown RBP21.95■■□□□ 1.1
MCF2L-230ENST00000491028 ABCB5Q2M3G0 1257 aa21.95■■□□□ 1.1
MCF2L-230ENST00000491028 CCDC178Q5BJE1 867 aa21.95■■□□□ 1.1
MCF2L-230ENST00000491028 FAM47AQ5JRC9 791 aa21.95■■□□□ 1.1
MCF2L-230ENST00000491028 TMEM179Q6ZVK1 233 aa21.95■■□□□ 1.1
MCF2L-230ENST00000491028 KLRG1Q96E93 195 aa21.95■■□□□ 1.1
MCF2L-230ENST00000491028 TMEM87BQ96K49 555 aa21.95■■□□□ 1.1
MCF2L-230ENST00000491028 CABP5Q9NP86 173 aa21.95■■□□□ 1.1
MCF2L-230ENST00000491028 TCP11L1Q9NUJ3 509 aa21.95■■□□□ 1.1
MCF2L-230ENST00000491028 CTNND1O60716 968 aaKnown RBP21.94■■□□□ 1.1
MCF2L-230ENST00000491028 USP2O75604 605 aaPredicted RBP21.94■■□□□ 1.1
MCF2L-230ENST00000491028 TOMM70O94826 608 aa21.94■■□□□ 1.1
MCF2L-230ENST00000491028 IREB2P48200 963 aaKnown RBP21.94■■□□□ 1.1
MCF2L-230ENST00000491028 MAP3K11Q16584 847 aa21.94■■□□□ 1.1
MCF2L-230ENST00000491028 PPP4R3BQ5MIZ7 849 aa21.94■■□□□ 1.1
MCF2L-230ENST00000491028 NKX2-3Q8TAU0 364 aa21.94■■□□□ 1.1
MCF2L-230ENST00000491028 WRNIP1Q96S55 665 aa21.94■■□□□ 1.1
MCF2L-230ENST00000491028 UBAC1Q9BSL1 405 aa21.94■■□□□ 1.1
MCF2L-230ENST00000491028 MPHOSPH10O00566 681 aaKnown RBP21.93■■□□□ 1.1
MCF2L-230ENST00000491028 GDF11O95390 407 aa21.93■■□□□ 1.1
MCF2L-230ENST00000491028 CPA1P15085 419 aa21.93■■□□□ 1.1
MCF2L-230ENST00000491028 NEK4P51957 841 aa21.93■■□□□ 1.1
MCF2L-230ENST00000491028 FKBP1BP68106 108 aa21.93■■□□□ 1.1
MCF2L-230ENST00000491028 COL9A3Q14050 684 aaPredicted RBP21.93■■□□□ 1.1
MCF2L-230ENST00000491028 RRP1BQ14684 758 aaKnown RBP21.93■■□□□ 1.1
MCF2L-230ENST00000491028 FBXL16Q8N461 479 aa21.93■■□□□ 1.1
MCF2L-230ENST00000491028 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.93■■□□□ 1.1
MCF2L-230ENST00000491028 TNKSO95271 1327 aa21.92■■□□□ 1.1
MCF2L-230ENST00000491028 IGKV6D-41A0A0C4DH26 115 aa21.92■■□□□ 1.1
MCF2L-230ENST00000491028 ERICH2A1L162 156 aa21.92■■□□□ 1.1
MCF2L-230ENST00000491028 ASNSP08243 561 aa21.92■■□□□ 1.1
MCF2L-230ENST00000491028 NOL9Q5SY16 702 aaKnown RBP21.92■■□□□ 1.1
MCF2L-230ENST00000491028 ARMC9Q7Z3E5 817 aa21.92■■□□□ 1.1
MCF2L-230ENST00000491028 TTC14Q96N46 770 aa21.92■■□□□ 1.1
MCF2L-230ENST00000491028 ZSCAN10Q96SZ4 725 aaPredicted RBP21.92■■□□□ 1.1
MCF2L-230ENST00000491028 ALDH8A1Q9H2A2 487 aaPredicted RBP21.92■■□□□ 1.1
MCF2L-230ENST00000491028 PDRG1Q9NUG6 133 aa21.92■■□□□ 1.1
MCF2L-230ENST00000491028 ZBTB21Q9ULJ3 1066 aa21.92■■□□□ 1.1
MCF2L-230ENST00000491028 ANGEL1Q9UNK9 670 aaKnown RBP21.92■■□□□ 1.1
MCF2L-230ENST00000491028 UNCXA6NJT0 531 aa21.91■■□□□ 1.1
MCF2L-230ENST00000491028 IFIT3O14879 490 aaKnown RBP21.91■■□□□ 1.1
MCF2L-230ENST00000491028 ST18O60284 1047 aa21.91■■□□□ 1.1
MCF2L-230ENST00000491028 GH2P01242 217 aa21.91■■□□□ 1.1
MCF2L-230ENST00000491028 INPP5BP32019 993 aa21.91■■□□□ 1.1
MCF2L-230ENST00000491028 PRKG1Q13976 671 aa21.91■■□□□ 1.1
MCF2L-230ENST00000491028 CHST3Q7LGC8 479 aa21.91■■□□□ 1.1
MCF2L-230ENST00000491028 SCYL3Q8IZE3 742 aa21.91■■□□□ 1.1
MCF2L-230ENST00000491028 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.91■■□□□ 1.1
MCF2L-230ENST00000491028 AGXT2Q9BYV1 514 aa21.91■■□□□ 1.1
MCF2L-230ENST00000491028 ZNF408Q9H9D4 720 aa21.91■■□□□ 1.1
MCF2L-230ENST00000491028 PASKQ96RG2 1323 aa21.9■■□□□ 1.1
MCF2L-230ENST00000491028 SH2B2O14492 632 aaPredicted RBP21.9■■□□□ 1.1
MCF2L-230ENST00000491028 NOVP48745 357 aa21.9■■□□□ 1.1
MCF2L-230ENST00000491028 MAP3K9P80192 1104 aa21.9■■□□□ 1.1
MCF2L-230ENST00000491028 TTLL12Q14166 644 aaPredicted RBP21.9■■□□□ 1.1
MCF2L-230ENST00000491028 ANKRD1Q15327 319 aa21.9■■□□□ 1.1
MCF2L-230ENST00000491028 TMEM67Q5HYA8 995 aa21.9■■□□□ 1.1
MCF2L-230ENST00000491028 DGKHQ86XP1 1220 aa21.9■■□□□ 1.1
MCF2L-230ENST00000491028 TCEANC2Q96MN5 208 aa21.9■■□□□ 1.1
MCF2L-230ENST00000491028 ZKSCAN3Q9BRR0 538 aa21.9■■□□□ 1.1
MCF2L-230ENST00000491028 KANSL2Q9H9L4 492 aa21.9■■□□□ 1.1
MCF2L-230ENST00000491028 IL17RBQ9NRM6 502 aa21.9■■□□□ 1.1
MCF2L-230ENST00000491028 MYH4Q9Y623 1939 aa21.89■■□□□ 1.09
MCF2L-230ENST00000491028 CELF2O95319 508 aaKnown RBP21.89■■□□□ 1.09
MCF2L-230ENST00000491028 GUCY1A2P33402 732 aa21.89■■□□□ 1.09
MCF2L-230ENST00000491028 LIFRP42702 1097 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms