RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	MAGEB6P1	A0A0J9YX57	407 aa		7.3	□□□□□ -1.24
FN1-223	ENST00000490833	GOLGA8A	A7E2F4	631 aa		7.3	□□□□□ -1.24
FN1-223	ENST00000490833	JAK2	O60674	1132 aa		7.3	□□□□□ -1.24
FN1-223	ENST00000490833	NR1I2	O75469	434 aa		7.3	□□□□□ -1.24
FN1-223	ENST00000490833	RPS6KA4	O75676	772 aa		7.3	□□□□□ -1.24
FN1-223	ENST00000490833	DDAH1	O94760	285 aa		7.3	□□□□□ -1.24
FN1-223	ENST00000490833	SMC2	O95347	1197 aa		7.3	□□□□□ -1.24
FN1-223	ENST00000490833	CTDNEP1	O95476	244 aa		7.3	□□□□□ -1.24
FN1-223	ENST00000490833	NTSR2	O95665	410 aa		7.3	□□□□□ -1.24
FN1-223	ENST00000490833	CALML3	P27482	149 aa		7.3	□□□□□ -1.24
FN1-223	ENST00000490833	SYK	P43405	635 aa		7.3	□□□□□ -1.24
FN1-223	ENST00000490833	RPS8	P62241	208 aa	Known RBP	7.3	□□□□□ -1.24
FN1-223	ENST00000490833	TUBB4B	P68371	445 aa		7.3	□□□□□ -1.24
FN1-223	ENST00000490833	PLCB2	Q00722	1185 aa		7.3	□□□□□ -1.24
FN1-223	ENST00000490833	CHRND	Q07001	517 aa		7.3	□□□□□ -1.24
FN1-223	ENST00000490833	RTN1	Q16799	776 aa		7.3	□□□□□ -1.24
FN1-223	ENST00000490833	FMR1NB	Q8N0W7	255 aa	Predicted RBP	7.3	□□□□□ -1.24
FN1-223	ENST00000490833	MAGEB6	Q8N7X4	407 aa		7.3	□□□□□ -1.24
FN1-223	ENST00000490833	KRI1	Q8N9T8	703 aa	Known RBP	7.3	□□□□□ -1.24
FN1-223	ENST00000490833	CCDC112	Q8NEF3	446 aa		7.3	□□□□□ -1.24
FN1-223	ENST00000490833	ENGASE	Q8NFI3	743 aa		7.3	□□□□□ -1.24
FN1-223	ENST00000490833	WDR66	Q8TBY9	1149 aa		7.3	□□□□□ -1.24
FN1-223	ENST00000490833	FERMT2	Q96AC1	680 aa		7.3	□□□□□ -1.24
FN1-223	ENST00000490833	LRCH3	Q96II8	777 aa		7.3	□□□□□ -1.24
FN1-223	ENST00000490833	TCEANC2	Q96MN5	208 aa		7.3	□□□□□ -1.24
FN1-223	ENST00000490833	CBX8	Q9HC52	389 aa		7.3	□□□□□ -1.24
FN1-223	ENST00000490833	KCND1	Q9NSA2	647 aa		7.3	□□□□□ -1.24
FN1-223	ENST00000490833	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	7.3	□□□□□ -1.24
FN1-223	ENST00000490833	ARPP21	Q9UBL0	812 aa	Predicted RBP	7.3	□□□□□ -1.24
FN1-223	ENST00000490833	NARF	Q9UHQ1	456 aa		7.3	□□□□□ -1.24
FN1-223	ENST00000490833	PCDHA7	Q9UN72	937 aa		7.3	□□□□□ -1.24
FN1-223	ENST00000490833	CCDC9	Q9Y3X0	531 aa	Known RBP	7.3	□□□□□ -1.24
FN1-223	ENST00000490833	TJP1	Q07157	1748 aa		7.3	□□□□□ -1.24
FN1-223	ENST00000490833	SHANK3	Q9BYB0	1731 aa		7.3	□□□□□ -1.24
FN1-223	ENST00000490833	NWD2	Q9ULI1	1742 aa		7.3	□□□□□ -1.24
FN1-223	ENST00000490833	MYH3	P11055	1940 aa		7.29	□□□□□ -1.24
FN1-223	ENST00000490833	RIC1	Q4ADV7	1423 aa		7.29	□□□□□ -1.24
FN1-223	ENST00000490833	ANKRD36C	Q5JPF3	1778 aa		7.29	□□□□□ -1.24
FN1-223	ENST00000490833	MAP3K7	O43318	606 aa		7.29	□□□□□ -1.24
FN1-223	ENST00000490833	ZNF202	O95125	648 aa		7.29	□□□□□ -1.24
FN1-223	ENST00000490833	FGR	P09769	529 aa		7.29	□□□□□ -1.24
FN1-223	ENST00000490833	FDPS	P14324	419 aa	Known RBP	7.29	□□□□□ -1.24
FN1-223	ENST00000490833	LIG1	P18858	919 aa		7.29	□□□□□ -1.24
FN1-223	ENST00000490833	CYP7A1	P22680	504 aa		7.29	□□□□□ -1.24
FN1-223	ENST00000490833	PHKA1	P46020	1223 aa		7.29	□□□□□ -1.24
FN1-223	ENST00000490833	ZNF75D	P51815	510 aa		7.29	□□□□□ -1.24
FN1-223	ENST00000490833	NLRP12	P59046	1061 aa		7.29	□□□□□ -1.24
FN1-223	ENST00000490833	KIF23	Q02241	960 aa	Predicted RBP	7.29	□□□□□ -1.24
FN1-223	ENST00000490833	KCNC4	Q03721	635 aa		7.29	□□□□□ -1.24
FN1-223	ENST00000490833	CAMK2B	Q13554	666 aa		7.29	□□□□□ -1.24
FN1-223	ENST00000490833	SNW1	Q13573	536 aa	Known RBP	7.29	□□□□□ -1.24
FN1-223	ENST00000490833	RASGRF1	Q13972	1273 aa		7.29	□□□□□ -1.24
FN1-223	ENST00000490833	SYCP1	Q15431	976 aa		7.29	□□□□□ -1.24
FN1-223	ENST00000490833	FAM98C	Q17RN3	349 aa	Known RBP	7.29	□□□□□ -1.24
FN1-223	ENST00000490833	SBK1	Q52WX2	424 aa		7.29	□□□□□ -1.24
FN1-223	ENST00000490833	PLA2G4D	Q86XP0	818 aa		7.29	□□□□□ -1.24
FN1-223	ENST00000490833	NOSTRIN	Q8IVI9	506 aa		7.29	□□□□□ -1.24
FN1-223	ENST00000490833	PDCL2	Q8N4E4	241 aa		7.29	□□□□□ -1.24
FN1-223	ENST00000490833	FANCB	Q8NB91	859 aa		7.29	□□□□□ -1.24
FN1-223	ENST00000490833	CCDC150	Q8NCX0	1101 aa		7.29	□□□□□ -1.24
FN1-223	ENST00000490833	KIAA1524	Q8TCG1	905 aa		7.29	□□□□□ -1.24
FN1-223	ENST00000490833	PGBD1	Q96JS3	809 aa		7.29	□□□□□ -1.24
FN1-223	ENST00000490833	USP28	Q96RU2	1077 aa		7.29	□□□□□ -1.24
FN1-223	ENST00000490833	SH3GLB2	Q9NR46	395 aa		7.29	□□□□□ -1.24
FN1-223	ENST00000490833	RAI14	Q9P0K7	980 aa		7.29	□□□□□ -1.24
FN1-223	ENST00000490833	ZSWIM5	Q9P217	1185 aa		7.29	□□□□□ -1.24
FN1-223	ENST00000490833	CLIP2	Q9UDT6	1046 aa		7.29	□□□□□ -1.24
FN1-223	ENST00000490833	HPS5	Q9UPZ3	1129 aa		7.29	□□□□□ -1.24
FN1-223	ENST00000490833	RTCB	Q9Y3I0	505 aa	Known RBP	7.29	□□□□□ -1.24
FN1-223	ENST00000490833	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	7.29	□□□□□ -1.24
FN1-223	ENST00000490833	ITGB4	P16144	1822 aa		7.29	□□□□□ -1.24
FN1-223	ENST00000490833	UBN2	Q6ZU65	1347 aa		7.28	□□□□□ -1.24
FN1-223	ENST00000490833	GOLGA6L9	A6NEM1	432 aa		7.28	□□□□□ -1.24
FN1-223	ENST00000490833	GSG1L2	A8MUP6	293 aa		7.28	□□□□□ -1.24
FN1-223	ENST00000490833	PRPF3	O43395	683 aa	Known RBP	7.28	□□□□□ -1.24
FN1-223	ENST00000490833	ORC4	O43929	436 aa		7.28	□□□□□ -1.24
FN1-223	ENST00000490833	ONECUT3	O60422	494 aa	Predicted RBP	7.28	□□□□□ -1.24
FN1-223	ENST00000490833	MBD4	O95243	580 aa		7.28	□□□□□ -1.24
FN1-223	ENST00000490833	MMP1	P03956	469 aa		7.28	□□□□□ -1.24
FN1-223	ENST00000490833	MYL1	P05976	194 aa		7.28	□□□□□ -1.24
FN1-223	ENST00000490833	SMARCA1	P28370	1054 aa		7.28	□□□□□ -1.24
FN1-223	ENST00000490833	HIBADH	P31937	336 aa	Known RBP	7.28	□□□□□ -1.24
FN1-223	ENST00000490833	GTF2F1	P35269	517 aa	Known RBP eCLIP	7.28	□□□□□ -1.24
FN1-223	ENST00000490833	PPP1R2	P41236	205 aa		7.28	□□□□□ -1.24
FN1-223	ENST00000490833	HAND2	P61296	217 aa		7.28	□□□□□ -1.24
FN1-223	ENST00000490833	PPARA	Q07869	468 aa		7.28	□□□□□ -1.24
FN1-223	ENST00000490833	HSP90AA2P	Q14568	343 aa	Predicted RBP	7.28	□□□□□ -1.24
FN1-223	ENST00000490833	CAMK4	Q16566	473 aa		7.28	□□□□□ -1.24
FN1-223	ENST00000490833	KRT40	Q6A162	431 aa		7.28	□□□□□ -1.24
FN1-223	ENST00000490833	TTLL5	Q6EMB2	1281 aa		7.28	□□□□□ -1.24
FN1-223	ENST00000490833	C15orf52	Q6ZUT6	534 aa	Known RBP	7.28	□□□□□ -1.24
FN1-223	ENST00000490833	FBXO33	Q7Z6M2	555 aa		7.28	□□□□□ -1.24
FN1-223	ENST00000490833	NBPF5P	Q86XG9	351 aa	Predicted RBP	7.28	□□□□□ -1.24
FN1-223	ENST00000490833	DGKH	Q86XP1	1220 aa		7.28	□□□□□ -1.24
FN1-223	ENST00000490833	FNBP4	Q8N3X1	1017 aa	Predicted RBP	7.28	□□□□□ -1.24
FN1-223	ENST00000490833	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	7.28	□□□□□ -1.24
FN1-223	ENST00000490833	MARCH10	Q8NA82	808 aa	Predicted RBP	7.28	□□□□□ -1.24
FN1-223	ENST00000490833	MLKL	Q8NB16	471 aa		7.28	□□□□□ -1.24
FN1-223	ENST00000490833	CTCFL	Q8NI51	663 aa	Predicted RBP	7.28	□□□□□ -1.24
FN1-223	ENST00000490833	CCDC12	Q8WUD4	166 aa	Predicted RBP	7.28	□□□□□ -1.24

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