RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 MX1P20591 662 aa18.35■□□□□ 0.53
COL27A1-206ENST00000490831 LACTBP83111 547 aaPredicted RBP18.35■□□□□ 0.53
COL27A1-206ENST00000490831 SLC4A8Q2Y0W8 1093 aa18.35■□□□□ 0.53
COL27A1-206ENST00000490831 GADL1Q6ZQY3 521 aa18.35■□□□□ 0.53
COL27A1-206ENST00000490831 SDR42E1Q8WUS8 393 aa18.35■□□□□ 0.53
COL27A1-206ENST00000490831 EFCC1Q9HA90 598 aa18.35■□□□□ 0.53
COL27A1-206ENST00000490831 MCM9Q9NXL9 1143 aa18.35■□□□□ 0.53
COL27A1-206ENST00000490831 GDF11O95390 407 aa18.34■□□□□ 0.53
COL27A1-206ENST00000490831 POLR3DP05423 398 aaPredicted RBP18.34■□□□□ 0.53
COL27A1-206ENST00000490831 ZFYP08048 801 aaPredicted RBP18.34■□□□□ 0.53
COL27A1-206ENST00000490831 BCRP11274 1271 aa18.34■□□□□ 0.53
COL27A1-206ENST00000490831 SHMT1P34896 483 aa18.34■□□□□ 0.53
COL27A1-206ENST00000490831 ARHGEF6Q15052 776 aa18.34■□□□□ 0.53
COL27A1-206ENST00000490831 SHROOM1Q2M3G4 852 aaPredicted RBP18.34■□□□□ 0.53
COL27A1-206ENST00000490831 ANKRD45Q5TZF3 282 aa18.34■□□□□ 0.53
COL27A1-206ENST00000490831 EXOC6Q8TAG9 804 aa18.34■□□□□ 0.53
COL27A1-206ENST00000490831 PUS7LQ9H0K6 701 aaKnown RBP18.34■□□□□ 0.53
COL27A1-206ENST00000490831 PTPN22Q9Y2R2 807 aa18.34■□□□□ 0.53
COL27A1-206ENST00000490831 PRKAB2O43741 272 aa18.33■□□□□ 0.52
COL27A1-206ENST00000490831 CYP2C8P10632 490 aa18.33■□□□□ 0.52
COL27A1-206ENST00000490831 RGS19P49795 217 aa18.33■□□□□ 0.52
COL27A1-206ENST00000490831 BACE1P56817 501 aa18.33■□□□□ 0.52
COL27A1-206ENST00000490831 SMC5Q8IY18 1101 aa18.33■□□□□ 0.52
COL27A1-206ENST00000490831 STAP2Q9UGK3 403 aa18.33■□□□□ 0.52
COL27A1-206ENST00000490831 CPA4Q9UI42 421 aa18.33■□□□□ 0.52
COL27A1-206ENST00000490831 SUPT16HQ9Y5B9 1047 aaKnown RBP18.33■□□□□ 0.52
COL27A1-206ENST00000490831 C19orf81C9J6K1 198 aa18.32■□□□□ 0.52
COL27A1-206ENST00000490831 RNF113AO15541 343 aaKnown RBP18.32■□□□□ 0.52
COL27A1-206ENST00000490831 GNRH1P01148 92 aa18.32■□□□□ 0.52
COL27A1-206ENST00000490831 GH2P01242 217 aa18.32■□□□□ 0.52
COL27A1-206ENST00000490831 HMGCS2P54868 508 aa18.32■□□□□ 0.52
COL27A1-206ENST00000490831 TREML2Q5T2D2 321 aa18.32■□□□□ 0.52
COL27A1-206ENST00000490831 APPBP2Q92624 585 aa18.32■□□□□ 0.52
COL27A1-206ENST00000490831 STRBPQ96SI9 672 aaKnown RBP18.32■□□□□ 0.52
COL27A1-206ENST00000490831 RWDD1Q9H446 243 aaPredicted RBP18.32■□□□□ 0.52
COL27A1-206ENST00000490831 EVX2Q03828 476 aa18.31■□□□□ 0.52
COL27A1-206ENST00000490831 MTMR2Q13614 643 aa18.31■□□□□ 0.52
COL27A1-206ENST00000490831 KIF22Q14807 665 aa18.31■□□□□ 0.52
COL27A1-206ENST00000490831 LRRFIP1Q32MZ4 808 aaKnown RBP18.31■□□□□ 0.52
COL27A1-206ENST00000490831 CERKLQ49MI3 558 aaPredicted RBP18.31■□□□□ 0.52
COL27A1-206ENST00000490831 OSBP2Q969R2 916 aa18.31■□□□□ 0.52
COL27A1-206ENST00000490831 ZBTB47Q9UFB7 747 aaPredicted RBP18.31■□□□□ 0.52
COL27A1-206ENST00000490831 USP17L10C9JJH3 530 aa18.3■□□□□ 0.52
COL27A1-206ENST00000490831 CYP2D6P10635 497 aa18.3■□□□□ 0.52
COL27A1-206ENST00000490831 ABCB5Q2M3G0 1257 aa18.3■□□□□ 0.52
COL27A1-206ENST00000490831 C12orf60Q5U649 245 aa18.3■□□□□ 0.52
COL27A1-206ENST00000490831 ARHGAP39Q9C0H5 1083 aa18.3■□□□□ 0.52
COL27A1-206ENST00000490831 SWAP70Q9UH65 585 aa18.3■□□□□ 0.52
COL27A1-206ENST00000490831 PNMA3Q9UL41 463 aa18.3■□□□□ 0.52
COL27A1-206ENST00000490831 SLC4A4Q9Y6R1 1079 aa18.3■□□□□ 0.52
COL27A1-206ENST00000490831 BAZ2AQ9UIF9 1905 aaKnown RBP18.29■□□□□ 0.52
COL27A1-206ENST00000490831 IGHDP01880 384 aa18.29■□□□□ 0.52
COL27A1-206ENST00000490831 CTGFP29279 349 aa18.29■□□□□ 0.52
COL27A1-206ENST00000490831 HOXA7P31268 230 aaPredicted RBP18.29■□□□□ 0.52
COL27A1-206ENST00000490831 PDE1AP54750 535 aa18.29■□□□□ 0.52
COL27A1-206ENST00000490831 PABPC4Q13310 644 aaKnown RBP eCLIP18.29■□□□□ 0.52
COL27A1-206ENST00000490831 GIMAP6Q6P9H5 292 aa18.29■□□□□ 0.52
COL27A1-206ENST00000490831 ZSWIM8A7E2V4 1837 aa18.28■□□□□ 0.52
COL27A1-206ENST00000490831 USP17L12C9JPN9 530 aa18.28■□□□□ 0.52
COL27A1-206ENST00000490831 USP17L21D6R901 530 aa18.28■□□□□ 0.52
COL27A1-206ENST00000490831 GUCY1A2P33402 732 aa18.28■□□□□ 0.52
COL27A1-206ENST00000490831 PRMT2P55345 433 aa18.28■□□□□ 0.52
COL27A1-206ENST00000490831 ARMC5Q96C12 935 aa18.28■□□□□ 0.52
COL27A1-206ENST00000490831 DDRGK1Q96HY6 314 aa18.28■□□□□ 0.52
COL27A1-206ENST00000490831 TRIM47Q96LD4 638 aa18.28■□□□□ 0.52
COL27A1-206ENST00000490831 C12orf42Q96LP6 360 aa18.28■□□□□ 0.52
COL27A1-206ENST00000490831 CABP5Q9NP86 173 aa18.28■□□□□ 0.52
COL27A1-206ENST00000490831 TMOD4Q9NZQ9 345 aa18.28■□□□□ 0.52
COL27A1-206ENST00000490831 GSG1L2A8MUP6 293 aa18.27■□□□□ 0.52
COL27A1-206ENST00000490831 GPAA1O43292 621 aa18.27■□□□□ 0.52
COL27A1-206ENST00000490831 PSMC4P43686 418 aa18.27■□□□□ 0.52
COL27A1-206ENST00000490831 GCLCP48506 637 aaPredicted RBP18.27■□□□□ 0.52
COL27A1-206ENST00000490831 SBK1Q52WX2 424 aa18.27■□□□□ 0.52
COL27A1-206ENST00000490831 CTR9Q6PD62 1173 aa18.27■□□□□ 0.52
COL27A1-206ENST00000490831 USP17L2Q6R6M4 530 aa18.27■□□□□ 0.52
COL27A1-206ENST00000490831 C16orf86Q6ZW13 317 aa18.27■□□□□ 0.52
COL27A1-206ENST00000490831 TICAM2Q86XR7 235 aa18.27■□□□□ 0.52
COL27A1-206ENST00000490831 SMCR8Q8TEV9 937 aaPredicted RBP18.27■□□□□ 0.52
COL27A1-206ENST00000490831 DYNLL2Q96FJ2 89 aa18.27■□□□□ 0.52
COL27A1-206ENST00000490831 KIAA1683Q9H0B3 1180 aa18.27■□□□□ 0.52
COL27A1-206ENST00000490831 ASCC2Q9H1I8 757 aaPredicted RBP18.27■□□□□ 0.52
COL27A1-206ENST00000490831 EMILIN3Q9NT22 766 aa18.27■□□□□ 0.52
COL27A1-206ENST00000490831 CENPFP49454 3210 aa18.27■□□□□ 0.52
COL27A1-206ENST00000490831 CYP2D7A0A087X1C5 515 aa18.26■□□□□ 0.51
COL27A1-206ENST00000490831 GNAT2P19087 354 aa18.26■□□□□ 0.51
COL27A1-206ENST00000490831 OSBPP22059 807 aa18.26■□□□□ 0.51
COL27A1-206ENST00000490831 NUCB1Q02818 461 aa18.26■□□□□ 0.51
COL27A1-206ENST00000490831 FAM110CQ1W6H9 321 aa18.26■□□□□ 0.51
COL27A1-206ENST00000490831 ZMYM1Q5SVZ6 1142 aa18.26■□□□□ 0.51
COL27A1-206ENST00000490831 AMOTL1Q8IY63 956 aa18.26■□□□□ 0.51
COL27A1-206ENST00000490831 SLC44A5Q8NCS7 719 aa18.26■□□□□ 0.51
COL27A1-206ENST00000490831 FSD1Q9BTV5 496 aa18.26■□□□□ 0.51
COL27A1-206ENST00000490831 ARPP21Q9UBL0 812 aaPredicted RBP18.26■□□□□ 0.51
COL27A1-206ENST00000490831 SRRDQ9UH36 339 aa18.26■□□□□ 0.51
COL27A1-206ENST00000490831 PTCH2Q9Y6C5 1203 aa18.26■□□□□ 0.51
COL27A1-206ENST00000490831 SMIM22K7EJ46 135 aa18.25■□□□□ 0.51
COL27A1-206ENST00000490831 M0R2C6 588 aa18.25■□□□□ 0.51
COL27A1-206ENST00000490831 HOXD10P28358 340 aa18.25■□□□□ 0.51
COL27A1-206ENST00000490831 CDK8P49336 464 aa18.25■□□□□ 0.51
COL27A1-206ENST00000490831 USP14P54578 494 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 160.8 ms