RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 GCGRP47871 477 aa9.21□□□□□ -0.94
CLDN1-202ENST00000490800 TNNI2P48788 182 aa9.21□□□□□ -0.94
CLDN1-202ENST00000490800 G3BP1Q13283 466 aaKnown RBP eCLIP9.21□□□□□ -0.94
CLDN1-202ENST00000490800 OS9Q13438 667 aaPredicted RBP9.21□□□□□ -0.94
CLDN1-202ENST00000490800 APOBEC3HQ6NTF7 200 aaKnown RBP9.21□□□□□ -0.94
CLDN1-202ENST00000490800 ERC1Q8IUD2 1116 aa9.21□□□□□ -0.94
CLDN1-202ENST00000490800 ZFRQ96KR1 1074 aaKnown RBP9.21□□□□□ -0.94
CLDN1-202ENST00000490800 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.21□□□□□ -0.94
CLDN1-202ENST00000490800 ELP3Q9H9T3 547 aa9.21□□□□□ -0.94
CLDN1-202ENST00000490800 IL1RAPL2Q9NP60 686 aa9.21□□□□□ -0.94
CLDN1-202ENST00000490800 SALL3Q9BXA9 1300 aa9.21□□□□□ -0.94
CLDN1-202ENST00000490800 A0A1B0GUL6 1792 aa9.21□□□□□ -0.94
CLDN1-202ENST00000490800 BHMG1C9JSJ3 638 aaPredicted RBP9.2□□□□□ -0.94
CLDN1-202ENST00000490800 IGF2BP3O00425 579 aaKnown RBP eCLIP9.2□□□□□ -0.94
CLDN1-202ENST00000490800 FKTNO75072 461 aa9.2□□□□□ -0.94
CLDN1-202ENST00000490800 CIAO1O76071 339 aa9.2□□□□□ -0.94
CLDN1-202ENST00000490800 ALDH1A1P00352 501 aa9.2□□□□□ -0.94
CLDN1-202ENST00000490800 CFHP08603 1231 aa9.2□□□□□ -0.94
CLDN1-202ENST00000490800 IL15P40933 162 aaPredicted RBP9.2□□□□□ -0.94
CLDN1-202ENST00000490800 ATP2B3Q16720 1220 aa9.2□□□□□ -0.94
CLDN1-202ENST00000490800 C8orf34Q49A92 452 aa9.2□□□□□ -0.94
CLDN1-202ENST00000490800 NOM1Q5C9Z4 860 aaKnown RBP9.2□□□□□ -0.94
CLDN1-202ENST00000490800 HHIPL2Q6UWX4 724 aa9.2□□□□□ -0.94
CLDN1-202ENST00000490800 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.2□□□□□ -0.94
CLDN1-202ENST00000490800 WDR66Q8TBY9 1149 aa9.2□□□□□ -0.94
CLDN1-202ENST00000490800 OPTNQ96CV9 577 aa9.2□□□□□ -0.94
CLDN1-202ENST00000490800 ZDHHC15Q96MV8 337 aa9.2□□□□□ -0.94
CLDN1-202ENST00000490800 PTPN18Q99952 460 aa9.2□□□□□ -0.94
CLDN1-202ENST00000490800 CFHR5Q9BXR6 569 aa9.2□□□□□ -0.94
CLDN1-202ENST00000490800 BACH2Q9BYV9 841 aa9.2□□□□□ -0.94
CLDN1-202ENST00000490800 BCL11AQ9H165 835 aa9.2□□□□□ -0.94
CLDN1-202ENST00000490800 SUGT1Q9Y2Z0 365 aa9.2□□□□□ -0.94
CLDN1-202ENST00000490800 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.2□□□□□ -0.94
CLDN1-202ENST00000490800 AKAP11Q9UKA4 1901 aa9.2□□□□□ -0.94
CLDN1-202ENST00000490800 SPTLC1O15269 473 aa9.19□□□□□ -0.94
CLDN1-202ENST00000490800 PDE1AP54750 535 aa9.19□□□□□ -0.94
CLDN1-202ENST00000490800 SOX10P56693 466 aa9.19□□□□□ -0.94
CLDN1-202ENST00000490800 TIMM10P62072 90 aa9.19□□□□□ -0.94
CLDN1-202ENST00000490800 PKN2Q16513 984 aaKnown RBP9.19□□□□□ -0.94
CLDN1-202ENST00000490800 OSBPL3Q9H4L5 887 aa9.19□□□□□ -0.94
CLDN1-202ENST00000490800 GNL3LQ9NVN8 582 aaKnown RBP9.19□□□□□ -0.94
CLDN1-202ENST00000490800 TMOD2Q9NZR1 351 aa9.19□□□□□ -0.94
CLDN1-202ENST00000490800 STAP2Q9UGK3 403 aa9.19□□□□□ -0.94
CLDN1-202ENST00000490800 HPS5Q9UPZ3 1129 aa9.19□□□□□ -0.94
CLDN1-202ENST00000490800 HOXA2O43364 376 aa9.18□□□□□ -0.94
CLDN1-202ENST00000490800 MAST3O60307 1309 aa9.18□□□□□ -0.94
CLDN1-202ENST00000490800 GSPT1P15170 499 aaKnown RBP9.18□□□□□ -0.94
CLDN1-202ENST00000490800 PRDX5P30044 214 aa9.18□□□□□ -0.94
CLDN1-202ENST00000490800 ADORA1P30542 326 aa9.18□□□□□ -0.94
CLDN1-202ENST00000490800 PHKA1P46020 1223 aa9.18□□□□□ -0.94
CLDN1-202ENST00000490800 USP46P62068 366 aa9.18□□□□□ -0.94
CLDN1-202ENST00000490800 VGLL4Q14135 290 aa9.18□□□□□ -0.94
CLDN1-202ENST00000490800 BMP2KLQ5H9B9 411 aa9.18□□□□□ -0.94
CLDN1-202ENST00000490800 TTC22Q5TAA0 569 aa9.18□□□□□ -0.94
CLDN1-202ENST00000490800 OTUD7BQ6GQQ9 843 aa9.18□□□□□ -0.94
CLDN1-202ENST00000490800 MIGA2Q7L4E1 593 aa9.18□□□□□ -0.94
CLDN1-202ENST00000490800 FAM83AQ86UY5 434 aa9.18□□□□□ -0.94
CLDN1-202ENST00000490800 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.18□□□□□ -0.94
CLDN1-202ENST00000490800 LRCH3Q96II8 777 aa9.18□□□□□ -0.94
CLDN1-202ENST00000490800 DENND2AQ9ULE3 1009 aa9.18□□□□□ -0.94
CLDN1-202ENST00000490800 GOLGA8CPA6NN73 597 aa9.17□□□□□ -0.94
CLDN1-202ENST00000490800 LDHBP07195 334 aaKnown RBP9.17□□□□□ -0.94
CLDN1-202ENST00000490800 MX1P20591 662 aa9.17□□□□□ -0.94
CLDN1-202ENST00000490800 TCP10Q12799 353 aa9.17□□□□□ -0.94
CLDN1-202ENST00000490800 TFCP2Q12800 502 aa9.17□□□□□ -0.94
CLDN1-202ENST00000490800 CRHR2Q13324 411 aa9.17□□□□□ -0.94
CLDN1-202ENST00000490800 FKBP1CQ5VVH2 108 aa9.17□□□□□ -0.94
CLDN1-202ENST00000490800 TSHZ3Q63HK5 1081 aa9.17□□□□□ -0.94
CLDN1-202ENST00000490800 CCDC102BQ68D86 513 aa9.17□□□□□ -0.94
CLDN1-202ENST00000490800 CDC42EP5Q6NZY7 148 aa9.17□□□□□ -0.94
CLDN1-202ENST00000490800 FBXO46Q6PJ61 603 aaPredicted RBP9.17□□□□□ -0.94
CLDN1-202ENST00000490800 AACSQ86V21 672 aa9.17□□□□□ -0.94
CLDN1-202ENST00000490800 CLASRPQ8N2M8 674 aaKnown RBP9.17□□□□□ -0.94
CLDN1-202ENST00000490800 HLA-CQ95604 372 aa9.17□□□□□ -0.94
CLDN1-202ENST00000490800 ZKSCAN4Q969J2 545 aaPredicted RBP9.17□□□□□ -0.94
CLDN1-202ENST00000490800 EAF2Q96CJ1 260 aaPredicted RBP9.17□□□□□ -0.94
CLDN1-202ENST00000490800 NEUROD6Q96NK8 337 aa9.17□□□□□ -0.94
CLDN1-202ENST00000490800 USP40Q9NVE5 1235 aa9.17□□□□□ -0.94
CLDN1-202ENST00000490800 DAGLAQ9Y4D2 1042 aa9.17□□□□□ -0.94
CLDN1-202ENST00000490800 CSADQ9Y600 493 aa9.17□□□□□ -0.94
CLDN1-202ENST00000490800 CCL15-CCL14A0A0B4J2E2 113 aa9.16□□□□□ -0.94
CLDN1-202ENST00000490800 A0A1B0GUL7 405 aa9.16□□□□□ -0.94
CLDN1-202ENST00000490800 RFC5P40937 340 aa9.16□□□□□ -0.94
CLDN1-202ENST00000490800 GTF2A2P52657 109 aa9.16□□□□□ -0.94
CLDN1-202ENST00000490800 GUCA2AQ02747 115 aa9.16□□□□□ -0.94
CLDN1-202ENST00000490800 NFIAQ12857 509 aa9.16□□□□□ -0.94
CLDN1-202ENST00000490800 MCM6Q14566 821 aa9.16□□□□□ -0.94
CLDN1-202ENST00000490800 CCL15Q16663 113 aa9.16□□□□□ -0.94
CLDN1-202ENST00000490800 QPCTQ16769 361 aa9.16□□□□□ -0.94
CLDN1-202ENST00000490800 TNNI3KQ59H18 835 aa9.16□□□□□ -0.94
CLDN1-202ENST00000490800 FAM151AQ8WW52 585 aa9.16□□□□□ -0.94
CLDN1-202ENST00000490800 BRI3BPQ8WY22 251 aa9.16□□□□□ -0.94
CLDN1-202ENST00000490800 XAGE2Q96GT9 111 aa9.16□□□□□ -0.94
CLDN1-202ENST00000490800 WRNIP1Q96S55 665 aa9.16□□□□□ -0.94
CLDN1-202ENST00000490800 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.16□□□□□ -0.94
CLDN1-202ENST00000490800 AKAP2Q9Y2D5 859 aa9.16□□□□□ -0.94
CLDN1-202ENST00000490800 TRIM17Q9Y577 477 aa9.16□□□□□ -0.94
CLDN1-202ENST00000490800 SNCAIPQ9Y6H5 919 aa9.16□□□□□ -0.94
CLDN1-202ENST00000490800 FPGT-TNNI3KV9GXZ4 949 aa9.16□□□□□ -0.94
CLDN1-202ENST00000490800 ECM29Q5VYK3 1845 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms