RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 DDX24Q9GZR7 859 aaKnown RBP eCLIP37.95■■■■□ 3.672e-12■■■■■ 31.2
LDB1-204ENST00000490751 ECHDC1Q9NTX5 307 aa37.95■■■■□ 3.67
LDB1-204ENST00000490751 SLFNL1Q499Z3 407 aa37.94■■■■□ 3.66
LDB1-204ENST00000490751 SH3D19Q5HYK7 790 aa37.94■■■■□ 3.66
LDB1-204ENST00000490751 PNMA3Q9UL41 463 aa37.94■■■■□ 3.66
LDB1-204ENST00000490751 FMNL1O95466 1100 aaPredicted RBP37.93■■■■□ 3.66
LDB1-204ENST00000490751 PRMT2P55345 433 aa37.93■■■■□ 3.66
LDB1-204ENST00000490751 MTMR2Q13614 643 aa37.93■■■■□ 3.66
LDB1-204ENST00000490751 SLC9C1Q4G0N8 1177 aa37.93■■■■□ 3.66
LDB1-204ENST00000490751 TATDN1Q6P1N9 297 aa37.92■■■■□ 3.66
LDB1-204ENST00000490751 SDR42E1Q8WUS8 393 aa37.92■■■■□ 3.66
LDB1-204ENST00000490751 ARMT1Q9H993 441 aa37.92■■■■□ 3.66
LDB1-204ENST00000490751 RBBP6Q7Z6E9 1792 aaKnown RBP37.92■■■■□ 3.66
LDB1-204ENST00000490751 POLR3DP05423 398 aaPredicted RBP37.91■■■■□ 3.66
LDB1-204ENST00000490751 CENPFP49454 3210 aa37.91■■■■□ 3.66
LDB1-204ENST00000490751 PLCD1P51178 756 aa37.91■■■■□ 3.66
LDB1-204ENST00000490751 BACE1P56817 501 aa37.91■■■■□ 3.66
LDB1-204ENST00000490751 CRBNQ96SW2 442 aa37.91■■■■□ 3.66
LDB1-204ENST00000490751 SRRDQ9UH36 339 aa37.91■■■■□ 3.66
LDB1-204ENST00000490751 GH2P01242 217 aa37.9■■■■□ 3.66
LDB1-204ENST00000490751 OSBPP22059 807 aa37.9■■■■□ 3.66
LDB1-204ENST00000490751 PABPC4Q13310 644 aaKnown RBP eCLIP37.9■■■■□ 3.66
LDB1-204ENST00000490751 MCM9Q9NXL9 1143 aa37.9■■■■□ 3.66
LDB1-204ENST00000490751 MBD4O95243 580 aa37.89■■■■□ 3.66
LDB1-204ENST00000490751 CHGBP05060 677 aa37.89■■■■□ 3.66
LDB1-204ENST00000490751 HOXD10P28358 340 aa37.89■■■■□ 3.66
LDB1-204ENST00000490751 FCGRTP55899 365 aa37.89■■■■□ 3.66
LDB1-204ENST00000490751 NBPF11Q86T75 865 aa37.89■■■■□ 3.66
LDB1-204ENST00000490751 GPATCH3Q96I76 525 aa37.89■■■■□ 3.66
LDB1-204ENST00000490751 ZNF333Q96JL9 665 aa37.89■■■■□ 3.66
LDB1-204ENST00000490751 DCP1AQ9NPI6 582 aaPredicted RBP37.89■■■■□ 3.66
LDB1-204ENST00000490751 UBE3CQ15386 1083 aa37.88■■■■□ 3.65
LDB1-204ENST00000490751 TMOD4Q9NZQ9 345 aa37.88■■■■□ 3.65
LDB1-204ENST00000490751 POTEFA5A3E0 1075 aa37.87■■■■□ 3.65
LDB1-204ENST00000490751 USP17L10C9JJH3 530 aa37.87■■■■□ 3.65
LDB1-204ENST00000490751 MYPNQ86TC9 1320 aa37.87■■■■□ 3.65
LDB1-204ENST00000490751 C19orf81C9J6K1 198 aa37.86■■■■□ 3.65
LDB1-204ENST00000490751 SHMT1P34896 483 aa37.86■■■■□ 3.65
LDB1-204ENST00000490751 CERKLQ49MI3 558 aaPredicted RBP37.86■■■■□ 3.65
LDB1-204ENST00000490751 TSHZ3Q63HK5 1081 aa37.86■■■■□ 3.65
LDB1-204ENST00000490751 ZSCAN25Q6NSZ9 544 aa37.86■■■■□ 3.65
LDB1-204ENST00000490751 ANKRD13CQ8N6S4 541 aa37.86■■■■□ 3.65
LDB1-204ENST00000490751 SH3TC2Q8TF17 1288 aa37.86■■■■□ 3.65
LDB1-204ENST00000490751 TNRC18O15417 2968 aaPredicted RBP37.86■■■■□ 3.65
LDB1-204ENST00000490751 BAZ2AQ9UIF9 1905 aaKnown RBP37.85■■■■□ 3.65
LDB1-204ENST00000490751 EVX2Q03828 476 aa37.85■■■■□ 3.65
LDB1-204ENST00000490751 ASCC2Q9H1I8 757 aaPredicted RBP37.85■■■■□ 3.65
LDB1-204ENST00000490751 PRKAB2O43741 272 aa37.84■■■■□ 3.65
LDB1-204ENST00000490751 GABPAQ06546 454 aa37.84■■■■□ 3.65
LDB1-204ENST00000490751 ABCB5Q2M3G0 1257 aa37.83■■■■□ 3.65
LDB1-204ENST00000490751 RAET1EQ8TD07 263 aa37.83■■■■□ 3.65
LDB1-204ENST00000490751 CYP2D6P10635 497 aa37.82■■■■□ 3.64
LDB1-204ENST00000490751 GCLCP48506 637 aaPredicted RBP37.82■■■■□ 3.64
LDB1-204ENST00000490751 PRKCZQ05513 592 aa37.82■■■■□ 3.64
LDB1-204ENST00000490751 FAM110CQ1W6H9 321 aa37.82■■■■□ 3.64
LDB1-204ENST00000490751 ATP8A2Q9NTI2 1148 aa37.82■■■■□ 3.64
LDB1-204ENST00000490751 KIAA0100Q14667 2235 aaKnown RBP37.81■■■■□ 3.64
LDB1-204ENST00000490751 RAB3GAP1Q15042 981 aa37.81■■■■□ 3.64
LDB1-204ENST00000490751 CABP5Q9NP86 173 aa37.81■■■■□ 3.64
LDB1-204ENST00000490751 IRX3P78415 501 aaPredicted RBP37.8■■■■□ 3.64
LDB1-204ENST00000490751 KBTBD3Q8NAB2 608 aa37.8■■■■□ 3.64
LDB1-204ENST00000490751 TMEM106CQ9BVX2 250 aa37.8■■■■□ 3.64
LDB1-204ENST00000490751 MYH8P13535 1937 aa37.8■■■■□ 3.64
LDB1-204ENST00000490751 MYCP01106 439 aaPredicted RBP37.79■■■■□ 3.64
LDB1-204ENST00000490751 HOXA7P31268 230 aaPredicted RBP37.79■■■■□ 3.64
LDB1-204ENST00000490751 USP17L2Q6R6M4 530 aa37.79■■■■□ 3.64
LDB1-204ENST00000490751 FEZ1Q99689 392 aa37.79■■■■□ 3.64
LDB1-204ENST00000490751 PUS7LQ9H0K6 701 aaKnown RBP37.79■■■■□ 3.64
LDB1-204ENST00000490751 EMILIN3Q9NT22 766 aa37.79■■■■□ 3.64
LDB1-204ENST00000490751 GABRQQ9UN88 632 aa37.79■■■■□ 3.64
LDB1-204ENST00000490751 TNPO2O14787 897 aaKnown RBP37.78■■■■□ 3.64
LDB1-204ENST00000490751 SLC4A4Q9Y6R1 1079 aa37.77■■■■□ 3.64
LDB1-204ENST00000490751 TTC41PQ6P2S7 1318 aa37.77■■■■□ 3.64
LDB1-204ENST00000490751 GRK4P32298 578 aa37.76■■■■□ 3.64
LDB1-204ENST00000490751 ZYXQ15942 572 aaKnown RBP37.76■■■■□ 3.64
LDB1-204ENST00000490751 SLC44A5Q8NCS7 719 aa37.76■■■■□ 3.64
LDB1-204ENST00000490751 OTUD7AQ8TE49 926 aaPredicted RBP37.76■■■■□ 3.64
LDB1-204ENST00000490751 DYNLL2Q96FJ2 89 aa37.75■■■■□ 3.63
LDB1-204ENST00000490751 P2RX7Q99572 595 aaKnown RBP37.75■■■■□ 3.63
LDB1-204ENST00000490751 EN2P19622 333 aaPredicted RBP37.74■■■■□ 3.63
LDB1-204ENST00000490751 GUCY1A2P33402 732 aa37.74■■■■□ 3.63
LDB1-204ENST00000490751 ACER1Q8TDN7 264 aa37.74■■■■□ 3.63
LDB1-204ENST00000490751 DDRGK1Q96HY6 314 aa37.74■■■■□ 3.63
LDB1-204ENST00000490751 C12orf42Q96LP6 360 aa37.74■■■■□ 3.63
LDB1-204ENST00000490751 SWAP70Q9UH65 585 aa37.74■■■■□ 3.63
LDB1-204ENST00000490751 DOCK3Q8IZD9 2030 aa37.73■■■■□ 3.63
LDB1-204ENST00000490751 BRCA2P51587 3418 aa37.73■■■■□ 3.63
LDB1-204ENST00000490751 MPHOSPH10O00566 681 aaKnown RBP37.73■■■■□ 3.63
LDB1-204ENST00000490751 FLT3LGP49771 235 aa37.73■■■■□ 3.63
LDB1-204ENST00000490751 HERVK_113P62684 666 aa37.73■■■■□ 3.63
LDB1-204ENST00000490751 SEPT2Q15019 361 aa37.73■■■■□ 3.63
LDB1-204ENST00000490751 AMOTL1Q8IY63 956 aa37.73■■■■□ 3.63
LDB1-204ENST00000490751 PDE4DIPQ5VU43 2346 aa37.72■■■■□ 3.63
LDB1-204ENST00000490751 CYP2D7A0A087X1C5 515 aa37.72■■■■□ 3.63
LDB1-204ENST00000490751 USP17L12C9JPN9 530 aa37.72■■■■□ 3.63
LDB1-204ENST00000490751 USP17L21D6R901 530 aa37.72■■■■□ 3.63
LDB1-204ENST00000490751 ERC2O15083 957 aa37.72■■■■□ 3.63
LDB1-204ENST00000490751 USP14P54578 494 aa37.72■■■■□ 3.63
LDB1-204ENST00000490751 C12orf60Q5U649 245 aa37.72■■■■□ 3.63
LDB1-204ENST00000490751 PI4K2BQ8TCG2 481 aa37.72■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms