RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 APBB1O00213 710 aa11.13□□□□□ -0.63
SUPT20H-220ENST00000490716 GORABQ5T7V8 394 aa11.13□□□□□ -0.63
SUPT20H-220ENST00000490716 MAPKAPK5Q8IW41 473 aa11.13□□□□□ -0.63
SUPT20H-220ENST00000490716 SLC10A4Q96EP9 437 aa11.13□□□□□ -0.63
SUPT20H-220ENST00000490716 ZFYP08048 801 aaPredicted RBP11.13□□□□□ -0.63
SUPT20H-220ENST00000490716 CRHR2Q13324 411 aa11.13□□□□□ -0.63
SUPT20H-220ENST00000490716 ADAMTS5Q9UNA0 930 aa11.13□□□□□ -0.63
SUPT20H-220ENST00000490716 PROCA1Q8NCQ7 364 aaPredicted RBP11.13□□□□□ -0.63
SUPT20H-220ENST00000490716 RWDD1Q9H446 243 aaPredicted RBP11.13□□□□□ -0.63
SUPT20H-220ENST00000490716 ARMT1Q9H993 441 aa11.13□□□□□ -0.63
SUPT20H-220ENST00000490716 FAM196BA6NMK8 535 aa11.12□□□□□ -0.63
SUPT20H-220ENST00000490716 IDH1O75874 414 aaKnown RBP11.12□□□□□ -0.63
SUPT20H-220ENST00000490716 RGS19P49795 217 aa11.12□□□□□ -0.63
SUPT20H-220ENST00000490716 SDR42E1Q8WUS8 393 aa11.12□□□□□ -0.63
SUPT20H-220ENST00000490716 SEC62Q99442 399 aaKnown RBP11.12□□□□□ -0.63
SUPT20H-220ENST00000490716 CNMDO75829 334 aa11.12□□□□□ -0.63
SUPT20H-220ENST00000490716 CYP2D6P10635 497 aa11.12□□□□□ -0.63
SUPT20H-220ENST00000490716 EVI5LQ96CN4 794 aa11.12□□□□□ -0.63
SUPT20H-220ENST00000490716 TMOD2Q9NZR1 351 aa11.12□□□□□ -0.63
SUPT20H-220ENST00000490716 SMCHD1A6NHR9 2005 aa11.12□□□□□ -0.63
SUPT20H-220ENST00000490716 ZNF296Q8WUU4 475 aaPredicted RBP11.12□□□□□ -0.63
SUPT20H-220ENST00000490716 EMILIN3Q9NT22 766 aa11.12□□□□□ -0.63
SUPT20H-220ENST00000490716 ZBTB21Q9ULJ3 1066 aa11.12□□□□□ -0.63
SUPT20H-220ENST00000490716 A0A1W2PRG0 241 aa11.11□□□□□ -0.63
SUPT20H-220ENST00000490716 MBD4O95243 580 aa11.11□□□□□ -0.63
SUPT20H-220ENST00000490716 ALDH1A1P00352 501 aa11.11□□□□□ -0.63
SUPT20H-220ENST00000490716 DNAJC2Q99543 621 aaKnown RBP11.11□□□□□ -0.63
SUPT20H-220ENST00000490716 TLR2O60603 784 aa11.11□□□□□ -0.63
SUPT20H-220ENST00000490716 PRKG1Q13976 671 aa11.11□□□□□ -0.63
SUPT20H-220ENST00000490716 TREML2Q5T2D2 321 aa11.11□□□□□ -0.63
SUPT20H-220ENST00000490716 HELLSQ9NRZ9 838 aa11.11□□□□□ -0.63
SUPT20H-220ENST00000490716 A0A0D9SFI3 127 aa11.11□□□□□ -0.63
SUPT20H-220ENST00000490716 GPR25O00155 361 aa11.11□□□□□ -0.63
SUPT20H-220ENST00000490716 CETPP11597 493 aa11.11□□□□□ -0.63
SUPT20H-220ENST00000490716 SNAPC2Q13487 334 aa11.11□□□□□ -0.63
SUPT20H-220ENST00000490716 PICALMQ13492 652 aa11.11□□□□□ -0.63
SUPT20H-220ENST00000490716 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.11□□□□□ -0.63
SUPT20H-220ENST00000490716 ZNF589Q86UQ0 364 aaPredicted RBP11.11□□□□□ -0.63
SUPT20H-220ENST00000490716 ANKRD45Q5TZF3 282 aa11.1□□□□□ -0.63
SUPT20H-220ENST00000490716 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.1□□□□□ -0.63
SUPT20H-220ENST00000490716 SERPINB13Q9UIV8 391 aa11.1□□□□□ -0.63
SUPT20H-220ENST00000490716 SYNPO2Q9UMS6 1093 aa11.1□□□□□ -0.63
SUPT20H-220ENST00000490716 AGTPBP1Q9UPW5 1226 aa11.1□□□□□ -0.63
SUPT20H-220ENST00000490716 PATL2C9JE40 543 aaKnown RBP11.1□□□□□ -0.63
SUPT20H-220ENST00000490716 DGKZQ13574 1117 aa11.1□□□□□ -0.63
SUPT20H-220ENST00000490716 GPAA1O43292 621 aa11.1□□□□□ -0.63
SUPT20H-220ENST00000490716 TBC1D8O95759 1140 aa11.1□□□□□ -0.63
SUPT20H-220ENST00000490716 TTC22Q5TAA0 569 aa11.1□□□□□ -0.63
SUPT20H-220ENST00000490716 USP6NLQ92738 828 aa11.1□□□□□ -0.63
SUPT20H-220ENST00000490716 OTUD5Q96G74 571 aa11.1□□□□□ -0.63
SUPT20H-220ENST00000490716 KIAA1683Q9H0B3 1180 aa11.1□□□□□ -0.63
SUPT20H-220ENST00000490716 MORF4L1Q9UBU8 362 aa11.1□□□□□ -0.63
SUPT20H-220ENST00000490716 RASA1P20936 1047 aa11.09□□□□□ -0.63
SUPT20H-220ENST00000490716 IFFO2Q5TF58 517 aa11.09□□□□□ -0.63
SUPT20H-220ENST00000490716 VPS53Q5VIR6 699 aa11.09□□□□□ -0.63
SUPT20H-220ENST00000490716 MKL1Q969V6 931 aa11.09□□□□□ -0.63
SUPT20H-220ENST00000490716 SWAP70Q9UH65 585 aa11.09□□□□□ -0.63
SUPT20H-220ENST00000490716 ERC2O15083 957 aa11.09□□□□□ -0.63
SUPT20H-220ENST00000490716 BACE1P56817 501 aa11.09□□□□□ -0.63
SUPT20H-220ENST00000490716 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.09□□□□□ -0.63
SUPT20H-220ENST00000490716 ZSCAN25Q6NSZ9 544 aa11.09□□□□□ -0.63
SUPT20H-220ENST00000490716 ZNF280CQ8ND82 737 aa11.09□□□□□ -0.63
SUPT20H-220ENST00000490716 REPS2Q8NFH8 660 aa11.09□□□□□ -0.63
SUPT20H-220ENST00000490716 CRNKL1Q9BZJ0 848 aaKnown RBP11.09□□□□□ -0.63
SUPT20H-220ENST00000490716 CYP2D7A0A087X1C5 515 aa11.08□□□□□ -0.64
SUPT20H-220ENST00000490716 CCL15-CCL14A0A0B4J2E2 113 aa11.08□□□□□ -0.64
SUPT20H-220ENST00000490716 CCL15Q16663 113 aa11.08□□□□□ -0.64
SUPT20H-220ENST00000490716 FAM227BQ96M60 508 aa11.08□□□□□ -0.64
SUPT20H-220ENST00000490716 TSKSQ9UJT2 592 aa11.08□□□□□ -0.64
SUPT20H-220ENST00000490716 CSADQ9Y600 493 aa11.08□□□□□ -0.64
SUPT20H-220ENST00000490716 TRPA1O75762 1119 aa11.08□□□□□ -0.64
SUPT20H-220ENST00000490716 SDSP20132 328 aa11.08□□□□□ -0.64
SUPT20H-220ENST00000490716 LNPKQ9C0E8 428 aa11.08□□□□□ -0.64
SUPT20H-220ENST00000490716 ARPP21Q9UBL0 812 aaPredicted RBP11.08□□□□□ -0.64
SUPT20H-220ENST00000490716 SAP30BPQ9UHR5 308 aaKnown RBP11.08□□□□□ -0.64
SUPT20H-220ENST00000490716 USP17L5A8MUK1 530 aa11.08□□□□□ -0.64
SUPT20H-220ENST00000490716 GNAT2P19087 354 aa11.08□□□□□ -0.64
SUPT20H-220ENST00000490716 CCDC84Q86UT8 332 aaPredicted RBP11.08□□□□□ -0.64
SUPT20H-220ENST00000490716 IFNL3Q8IZI9 196 aa11.08□□□□□ -0.64
SUPT20H-220ENST00000490716 CDK8P49336 464 aa11.07□□□□□ -0.64
SUPT20H-220ENST00000490716 SLC44A5Q8NCS7 719 aa11.07□□□□□ -0.64
SUPT20H-220ENST00000490716 DYNLL2Q96FJ2 89 aa11.07□□□□□ -0.64
SUPT20H-220ENST00000490716 ASNSP08243 561 aa11.07□□□□□ -0.64
SUPT20H-220ENST00000490716 PDHXO00330 501 aa11.07□□□□□ -0.64
SUPT20H-220ENST00000490716 IL17RBQ9NRM6 502 aa11.07□□□□□ -0.64
SUPT20H-220ENST00000490716 ZHX2Q9Y6X8 837 aa11.07□□□□□ -0.64
SUPT20H-220ENST00000490716 TMX2Q9Y320 296 aa11.06□□□□□ -0.64
SUPT20H-220ENST00000490716 C19orf81C9J6K1 198 aa11.06□□□□□ -0.64
SUPT20H-220ENST00000490716 USP17L12C9JPN9 530 aa11.06□□□□□ -0.64
SUPT20H-220ENST00000490716 USP17L21D6R901 530 aa11.06□□□□□ -0.64
SUPT20H-220ENST00000490716 AKR1B1P15121 316 aa11.06□□□□□ -0.64
SUPT20H-220ENST00000490716 TTC6Q86TZ1 520 aa11.06□□□□□ -0.64
SUPT20H-220ENST00000490716 GPATCH3Q96I76 525 aa11.06□□□□□ -0.64
SUPT20H-220ENST00000490716 TCP11L1Q9NUJ3 509 aa11.06□□□□□ -0.64
SUPT20H-220ENST00000490716 GJD2Q9UKL4 321 aa11.06□□□□□ -0.64
SUPT20H-220ENST00000490716 ORC4O43929 436 aa11.06□□□□□ -0.64
SUPT20H-220ENST00000490716 HSPD1P10809 573 aaKnown RBP11.06□□□□□ -0.64
SUPT20H-220ENST00000490716 LACTBP83111 547 aaPredicted RBP11.06□□□□□ -0.64
SUPT20H-220ENST00000490716 MKRN3Q13064 507 aaKnown RBP11.06□□□□□ -0.64
SUPT20H-220ENST00000490716 ARMC5Q96C12 935 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms