RNA–Protein interactions for RNA: ENST00000490690.1

SHROOM3-209, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-209ENST00000490690 CCDC178Q5BJE1 867 aa23.5■■□□□ 1.35
SHROOM3-209ENST00000490690 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.5■■□□□ 1.35
SHROOM3-209ENST00000490690 ESR2Q92731 530 aa23.5■■□□□ 1.35
SHROOM3-209ENST00000490690 TOMM22Q9NS69 142 aa23.5■■□□□ 1.35
SHROOM3-209ENST00000490690 BAZ2AQ9UIF9 1905 aaKnown RBP23.5■■□□□ 1.35
SHROOM3-209ENST00000490690 LAMB1P07942 1786 aa23.5■■□□□ 1.35
SHROOM3-209ENST00000490690 FAM196BA6NMK8 535 aa23.49■■□□□ 1.35
SHROOM3-209ENST00000490690 INPP5BP32019 993 aa23.49■■□□□ 1.35
SHROOM3-209ENST00000490690 ZNF157P51786 506 aaPredicted RBP23.49■■□□□ 1.35
SHROOM3-209ENST00000490690 HAND2P61296 217 aa23.49■■□□□ 1.35
SHROOM3-209ENST00000490690 PPATQ06203 517 aa23.49■■□□□ 1.35
SHROOM3-209ENST00000490690 NECTIN1Q15223 517 aa23.49■■□□□ 1.35
SHROOM3-209ENST00000490690 DEFB115Q30KQ5 88 aa23.49■■□□□ 1.35
SHROOM3-209ENST00000490690 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.49■■□□□ 1.35
SHROOM3-209ENST00000490690 SPDYE5A6NIY4 337 aa23.48■■□□□ 1.35
SHROOM3-209ENST00000490690 USP17L5A8MUK1 530 aa23.48■■□□□ 1.35
SHROOM3-209ENST00000490690 MPHOSPH10O00566 681 aaKnown RBP23.48■■□□□ 1.35
SHROOM3-209ENST00000490690 CYP21A2P08686 494 aa23.48■■□□□ 1.35
SHROOM3-209ENST00000490690 TSPY3P0CV98 308 aa23.48■■□□□ 1.35
SHROOM3-209ENST00000490690 TSPY8P0CW00 308 aa23.48■■□□□ 1.35
SHROOM3-209ENST00000490690 CTDSPL2Q05D32 466 aa23.48■■□□□ 1.35
SHROOM3-209ENST00000490690 RALYLQ86SE5 291 aaKnown RBP23.48■■□□□ 1.35
SHROOM3-209ENST00000490690 ZKSCAN4Q969J2 545 aaPredicted RBP23.48■■□□□ 1.35
SHROOM3-209ENST00000490690 ZBTB21Q9ULJ3 1066 aa23.48■■□□□ 1.35
SHROOM3-209ENST00000490690 TSPY2A6NKD2 308 aa23.47■■□□□ 1.35
SHROOM3-209ENST00000490690 RASA1P20936 1047 aa23.47■■□□□ 1.35
SHROOM3-209ENST00000490690 C8orf34Q49A92 452 aa23.47■■□□□ 1.35
SHROOM3-209ENST00000490690 CREB3L3Q68CJ9 461 aa23.47■■□□□ 1.35
SHROOM3-209ENST00000490690 MOB2Q70IA6 237 aa23.47■■□□□ 1.35
SHROOM3-209ENST00000490690 REM2Q8IYK8 340 aaPredicted RBP23.47■■□□□ 1.35
SHROOM3-209ENST00000490690 SLC44A5Q8NCS7 719 aa23.47■■□□□ 1.35
SHROOM3-209ENST00000490690 SH2D4AQ9H788 454 aa23.47■■□□□ 1.35
SHROOM3-209ENST00000490690 KANSL2Q9H9L4 492 aa23.47■■□□□ 1.35
SHROOM3-209ENST00000490690 SNCAIPQ9Y6H5 919 aa23.47■■□□□ 1.35
SHROOM3-209ENST00000490690 SLC27A2O14975 620 aa23.46■■□□□ 1.35
SHROOM3-209ENST00000490690 RANBP6O60518 1105 aaKnown RBP23.46■■□□□ 1.35
SHROOM3-209ENST00000490690 GH2P01242 217 aa23.46■■□□□ 1.35
SHROOM3-209ENST00000490690 PPIL2Q13356 520 aa23.46■■□□□ 1.35
SHROOM3-209ENST00000490690 TSGA10IPQ3SY00 556 aa23.46■■□□□ 1.35
SHROOM3-209ENST00000490690 PAXIP1Q6ZW49 1069 aaPredicted RBP23.46■■□□□ 1.35
SHROOM3-209ENST00000490690 NCOA7Q8NI08 942 aa23.46■■□□□ 1.35
SHROOM3-209ENST00000490690 PLIN4Q96Q06 1357 aa23.46■■□□□ 1.35
SHROOM3-209ENST00000490690 ELP3Q9H9T3 547 aa23.46■■□□□ 1.35
SHROOM3-209ENST00000490690 FZD1Q9UP38 647 aa23.46■■□□□ 1.35
SHROOM3-209ENST00000490690 SIPA1L1O43166 1804 aa23.45■■□□□ 1.34
SHROOM3-209ENST00000490690 GDF11O95390 407 aa23.45■■□□□ 1.34
SHROOM3-209ENST00000490690 HMGB1P09429 215 aaKnown RBP23.45■■□□□ 1.34
SHROOM3-209ENST00000490690 PTPRAP18433 802 aa23.45■■□□□ 1.34
SHROOM3-209ENST00000490690 HSPA4P34932 840 aa23.45■■□□□ 1.34
SHROOM3-209ENST00000490690 NOGQ13253 232 aa23.45■■□□□ 1.34
SHROOM3-209ENST00000490690 IQCA1Q86XH1 822 aa23.45■■□□□ 1.34
SHROOM3-209ENST00000490690 NEDD1Q8NHV4 660 aa23.45■■□□□ 1.34
SHROOM3-209ENST00000490690 USP26Q9BXU7 913 aa23.45■■□□□ 1.34
SHROOM3-209ENST00000490690 SYNPO2Q9UMS6 1093 aa23.45■■□□□ 1.34
SHROOM3-209ENST00000490690 SLC10A3P09131 477 aa23.44■■□□□ 1.34
SHROOM3-209ENST00000490690 RAB3GAP1Q15042 981 aa23.44■■□□□ 1.34
SHROOM3-209ENST00000490690 RRP12Q5JTH9 1297 aaKnown RBP23.44■■□□□ 1.34
SHROOM3-209ENST00000490690 TBC1D10CQ8IV04 446 aa23.44■■□□□ 1.34
SHROOM3-209ENST00000490690 STK11IPQ8N1F8 1099 aa23.44■■□□□ 1.34
SHROOM3-209ENST00000490690 OPTNQ96CV9 577 aa23.44■■□□□ 1.34
SHROOM3-209ENST00000490690 WDR18Q9BV38 432 aa23.44■■□□□ 1.34
SHROOM3-209ENST00000490690 ARHGEF10LQ9HCE6 1279 aa23.44■■□□□ 1.34
SHROOM3-209ENST00000490690 LAMA4Q16363 1823 aa23.43■■□□□ 1.34
SHROOM3-209ENST00000490690 E7EWF7 191 aa23.43■■□□□ 1.34
SHROOM3-209ENST00000490690 CXCL11O14625 94 aa23.43■■□□□ 1.34
SHROOM3-209ENST00000490690 PRDM1O75626 825 aa23.43■■□□□ 1.34
SHROOM3-209ENST00000490690 AKR1B1P15121 316 aa23.43■■□□□ 1.34
SHROOM3-209ENST00000490690 PSMA5P28066 241 aa23.43■■□□□ 1.34
SHROOM3-209ENST00000490690 TFAP4Q01664 338 aa23.43■■□□□ 1.34
SHROOM3-209ENST00000490690 SART3Q15020 963 aaKnown RBP23.43■■□□□ 1.34
SHROOM3-209ENST00000490690 ZNF280CQ8ND82 737 aa23.43■■□□□ 1.34
SHROOM3-209ENST00000490690 WNK4Q96J92 1243 aa23.43■■□□□ 1.34
SHROOM3-209ENST00000490690 CLMNQ96JQ2 1002 aa23.43■■□□□ 1.34
SHROOM3-209ENST00000490690 MTA3Q9BTC8 594 aa23.43■■□□□ 1.34
SHROOM3-209ENST00000490690 TCP11L1Q9NUJ3 509 aa23.43■■□□□ 1.34
SHROOM3-209ENST00000490690 ZHX2Q9Y6X8 837 aa23.43■■□□□ 1.34
SHROOM3-209ENST00000490690 GTF2A2P52657 109 aa23.42■■□□□ 1.34
SHROOM3-209ENST00000490690 USP14P54578 494 aa23.42■■□□□ 1.34
SHROOM3-209ENST00000490690 INHBEP58166 350 aa23.42■■□□□ 1.34
SHROOM3-209ENST00000490690 ANAPC15P60006 121 aa23.42■■□□□ 1.34
SHROOM3-209ENST00000490690 EVX2Q03828 476 aa23.42■■□□□ 1.34
SHROOM3-209ENST00000490690 ICA1Q05084 483 aa23.42■■□□□ 1.34
SHROOM3-209ENST00000490690 SPRYD7Q5W111 196 aa23.42■■□□□ 1.34
SHROOM3-209ENST00000490690 RASAL3Q86YV0 1011 aa23.42■■□□□ 1.34
SHROOM3-209ENST00000490690 KCNB2Q92953 911 aa23.42■■□□□ 1.34
SHROOM3-209ENST00000490690 OTUD5Q96G74 571 aa23.42■■□□□ 1.34
SHROOM3-209ENST00000490690 NBPF3Q9H094 633 aa23.42■■□□□ 1.34
SHROOM3-209ENST00000490690 MANSC4A6NHS7 340 aaPredicted RBP23.41■■□□□ 1.34
SHROOM3-209ENST00000490690 C19orf81C9J6K1 198 aa23.41■■□□□ 1.34
SHROOM3-209ENST00000490690 SREBF2Q12772 1141 aa23.41■■□□□ 1.34
SHROOM3-209ENST00000490690 SNAPC2Q13487 334 aa23.41■■□□□ 1.34
SHROOM3-209ENST00000490690 DOCK1Q14185 1865 aa23.41■■□□□ 1.34
SHROOM3-209ENST00000490690 ERICH2A1L162 156 aa23.4■■□□□ 1.34
SHROOM3-209ENST00000490690 TTLL1O95922 423 aa23.4■■□□□ 1.34
SHROOM3-209ENST00000490690 SLURP2P0DP57 97 aa23.4■■□□□ 1.34
SHROOM3-209ENST00000490690 RRP1BQ14684 758 aaKnown RBP23.4■■□□□ 1.34
SHROOM3-209ENST00000490690 CAPNS2Q96L46 248 aa23.4■■□□□ 1.34
SHROOM3-209ENST00000490690 TTC14Q96N46 770 aa23.4■■□□□ 1.34
SHROOM3-209ENST00000490690 UBAC1Q9BSL1 405 aa23.4■■□□□ 1.34
SHROOM3-209ENST00000490690 NYAP2Q9P242 653 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms