RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 ZNF532Q9HCE3 1301 aa14.44□□□□□ -0.1
SHOX2-205ENST00000490689 SPTY2D1Q68D10 685 aaPredicted RBP14.44□□□□□ -0.1
SHOX2-205ENST00000490689 CCDC91Q7Z6B0 441 aa14.44□□□□□ -0.1
SHOX2-205ENST00000490689 FCHSD1Q86WN1 690 aa14.44□□□□□ -0.1
SHOX2-205ENST00000490689 ANKRD13CQ8N6S4 541 aa14.44□□□□□ -0.1
SHOX2-205ENST00000490689 STX8Q9UNK0 236 aa14.44□□□□□ -0.1
SHOX2-205ENST00000490689 TMTC2Q8N394 836 aa14.44□□□□□ -0.1
SHOX2-205ENST00000490689 FAM71BQ8TC56 605 aa14.44□□□□□ -0.1
SHOX2-205ENST00000490689 NELFBQ8WX92 580 aa14.44□□□□□ -0.1
SHOX2-205ENST00000490689 SUGCTQ9HAC7 445 aa14.44□□□□□ -0.1
SHOX2-205ENST00000490689 FHOD1Q9Y613 1164 aa14.44□□□□□ -0.1
SHOX2-205ENST00000490689 SMIM23A6NLE4 172 aa14.44□□□□□ -0.1
SHOX2-205ENST00000490689 DEXIO95424 95 aa14.44□□□□□ -0.1
SHOX2-205ENST00000490689 CAPN7Q9Y6W3 813 aa14.44□□□□□ -0.1
SHOX2-205ENST00000490689 CRB1P82279 1406 aa14.44□□□□□ -0.1
SHOX2-205ENST00000490689 ROBO2Q9HCK4 1378 aa14.43□□□□□ -0.1
SHOX2-205ENST00000490689 WHAMMP3Q1A5X7 153 aa14.43□□□□□ -0.1
SHOX2-205ENST00000490689 G3V3G9 751 aa14.43□□□□□ -0.1
SHOX2-205ENST00000490689 GBP2P32456 591 aaPredicted RBP14.43□□□□□ -0.1
SHOX2-205ENST00000490689 DCAF8Q5TAQ9 597 aa14.43□□□□□ -0.1
SHOX2-205ENST00000490689 TCERG1LQ5VWI1 586 aa14.43□□□□□ -0.1
SHOX2-205ENST00000490689 APOA5Q6Q788 366 aa14.43□□□□□ -0.1
SHOX2-205ENST00000490689 KLHL34Q8N239 644 aa14.43□□□□□ -0.1
SHOX2-205ENST00000490689 CSRNP2Q9H175 543 aa14.43□□□□□ -0.1
SHOX2-205ENST00000490689 FEZ2Q9UHY8 353 aaPredicted RBP14.43□□□□□ -0.1
SHOX2-205ENST00000490689 EPN1Q9Y6I3 576 aaPredicted RBP14.43□□□□□ -0.1
SHOX2-205ENST00000490689 IKQ13123 557 aaPredicted RBP14.43□□□□□ -0.1
SHOX2-205ENST00000490689 C8orf74Q6P047 294 aa14.43□□□□□ -0.1
SHOX2-205ENST00000490689 CCDC121Q6ZUS5 278 aa14.43□□□□□ -0.1
SHOX2-205ENST00000490689 ORAI2Q96SN7 254 aa14.43□□□□□ -0.1
SHOX2-205ENST00000490689 PUS7LQ9H0K6 701 aaKnown RBP14.43□□□□□ -0.1
SHOX2-205ENST00000490689 TLDC2A0PJX2 215 aa14.42□□□□□ -0.1
SHOX2-205ENST00000490689 BMP15O95972 392 aa14.42□□□□□ -0.1
SHOX2-205ENST00000490689 PLCD1P51178 756 aa14.42□□□□□ -0.1
SHOX2-205ENST00000490689 SPATA1Q5VX52 437 aa14.42□□□□□ -0.1
SHOX2-205ENST00000490689 CSGALNACT2Q8N6G5 542 aa14.42□□□□□ -0.1
SHOX2-205ENST00000490689 SMARCC2Q8TAQ2 1214 aa14.42□□□□□ -0.1
SHOX2-205ENST00000490689 SLC52A2Q9HAB3 445 aa14.42□□□□□ -0.1
SHOX2-205ENST00000490689 INCENPQ9NQS7 918 aa14.42□□□□□ -0.1
SHOX2-205ENST00000490689 KIF28PB7ZC32 967 aa14.42□□□□□ -0.1
SHOX2-205ENST00000490689 TEX33O43247 280 aa14.42□□□□□ -0.1
SHOX2-205ENST00000490689 UQCRFS1P1P0C7P4 283 aa14.42□□□□□ -0.1
SHOX2-205ENST00000490689 CDC25AP30304 524 aa14.42□□□□□ -0.1
SHOX2-205ENST00000490689 HEATR3Q7Z4Q2 680 aa14.42□□□□□ -0.1
SHOX2-205ENST00000490689 OR8K1Q8NGG5 319 aa14.42□□□□□ -0.1
SHOX2-205ENST00000490689 TUBB2AQ13885 445 aa14.42□□□□□ -0.1
SHOX2-205ENST00000490689 PTPROQ16827 1216 aa14.42□□□□□ -0.1
SHOX2-205ENST00000490689 TUBB2BQ9BVA1 445 aa14.42□□□□□ -0.1
SHOX2-205ENST00000490689 NOC4LQ9BVI4 516 aaKnown RBP14.42□□□□□ -0.1
SHOX2-205ENST00000490689 GUCY2FP51841 1108 aa14.41□□□□□ -0.1
SHOX2-205ENST00000490689 GSPT2Q8IYD1 628 aaKnown RBP14.41□□□□□ -0.1
SHOX2-205ENST00000490689 EIF3CLB5ME19 914 aaKnown RBP14.41□□□□□ -0.1
SHOX2-205ENST00000490689 SRGAP2O75044 1071 aa14.41□□□□□ -0.1
SHOX2-205ENST00000490689 MAP2K1Q02750 393 aaPredicted RBP14.41□□□□□ -0.1
SHOX2-205ENST00000490689 TTC38Q5R3I4 469 aa14.41□□□□□ -0.1
SHOX2-205ENST00000490689 FAM114A1Q8IWE2 563 aa14.41□□□□□ -0.1
SHOX2-205ENST00000490689 EIF3CQ99613 913 aaKnown RBP14.41□□□□□ -0.1
SHOX2-205ENST00000490689 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.41□□□□□ -0.1
SHOX2-205ENST00000490689 KCNJ18B7U540 433 aa14.41□□□□□ -0.1
SHOX2-205ENST00000490689 KCNJ12Q14500 433 aa14.41□□□□□ -0.1
SHOX2-205ENST00000490689 SECISBP2LQ93073 1101 aaKnown RBP14.41□□□□□ -0.1
SHOX2-205ENST00000490689 FAM207AQ9NSI2 230 aaPredicted RBP14.41□□□□□ -0.1
SHOX2-205ENST00000490689 JAG2Q9Y219 1238 aa14.41□□□□□ -0.1
SHOX2-205ENST00000490689 ZMYM6O95789 1325 aa14.41□□□□□ -0.1
SHOX2-205ENST00000490689 USP6P35125 1406 aa14.41□□□□□ -0.1
SHOX2-205ENST00000490689 MAP2K2P36507 400 aa14.41□□□□□ -0.1
SHOX2-205ENST00000490689 CPLX4Q7Z7G2 160 aa14.41□□□□□ -0.1
SHOX2-205ENST00000490689 TSG101Q99816 390 aa14.41□□□□□ -0.1
SHOX2-205ENST00000490689 MED4Q9NPJ6 270 aa14.41□□□□□ -0.1
SHOX2-205ENST00000490689 PARP3Q9Y6F1 533 aa14.41□□□□□ -0.1
SHOX2-205ENST00000490689 H2AFXP16104 143 aaPredicted RBP14.4□□□□□ -0.1
SHOX2-205ENST00000490689 ITGA6P23229 1130 aa14.4□□□□□ -0.1
SHOX2-205ENST00000490689 TYW1BQ6NUM6 668 aa14.4□□□□□ -0.1
SHOX2-205ENST00000490689 EPSTI1Q96J88 318 aa14.4□□□□□ -0.1
SHOX2-205ENST00000490689 ZNF446Q9NWS9 450 aa14.4□□□□□ -0.1
SHOX2-205ENST00000490689 PCDHB6Q9Y5E3 794 aa14.4□□□□□ -0.1
SHOX2-205ENST00000490689 CTDNEP1O95476 244 aa14.4□□□□□ -0.1
SHOX2-205ENST00000490689 DTHD1Q6ZMT9 781 aa14.4□□□□□ -0.1
SHOX2-205ENST00000490689 CALML4Q96GE6 196 aa14.4□□□□□ -0.1
SHOX2-205ENST00000490689 CAPS2Q9BXY5 557 aa14.4□□□□□ -0.1
SHOX2-205ENST00000490689 KAT14Q9H8E8 782 aa14.4□□□□□ -0.1
SHOX2-205ENST00000490689 N4BP1O75113 896 aaKnown RBP14.4□□□□□ -0.1
SHOX2-205ENST00000490689 CXCR5P32302 372 aa14.4□□□□□ -0.1
SHOX2-205ENST00000490689 MORC3Q14149 939 aa14.4□□□□□ -0.1
SHOX2-205ENST00000490689 SYMPKQ92797 1274 aaKnown RBP14.4□□□□□ -0.1
SHOX2-205ENST00000490689 PPANQ9NQ55 473 aaKnown RBP14.4□□□□□ -0.1
SHOX2-205ENST00000490689 REREQ9P2R6 1566 aa14.39□□□□□ -0.11
SHOX2-205ENST00000490689 PPP6R2O75170 966 aa14.39□□□□□ -0.11
SHOX2-205ENST00000490689 SHC4Q6S5L8 630 aa14.39□□□□□ -0.11
SHOX2-205ENST00000490689 KLHL7Q8IXQ5 586 aa14.39□□□□□ -0.11
SHOX2-205ENST00000490689 ENGASEQ8NFI3 743 aa14.39□□□□□ -0.11
SHOX2-205ENST00000490689 HGSO14964 777 aaPredicted RBP14.39□□□□□ -0.11
SHOX2-205ENST00000490689 CYP27A1Q02318 531 aa14.39□□□□□ -0.11
SHOX2-205ENST00000490689 L2HGDHQ9H9P8 463 aa14.39□□□□□ -0.11
SHOX2-205ENST00000490689 MRFAP1Q9Y605 127 aa14.39□□□□□ -0.11
SHOX2-205ENST00000490689 IRS4O14654 1257 aaPredicted RBP14.39□□□□□ -0.11
SHOX2-205ENST00000490689 PRR29P0C7W0 189 aa14.39□□□□□ -0.11
SHOX2-205ENST00000490689 CAVIN4Q5BKX8 364 aa14.39□□□□□ -0.11
SHOX2-205ENST00000490689 ENOX1Q8TC92 643 aaKnown RBP14.39□□□□□ -0.11
SHOX2-205ENST00000490689 DCAF5Q96JK2 942 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms