RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 FAM196BA6NMK8 535 aa12.58□□□□□ -0.4
TTC28-207ENST00000490475 USP17L10C9JJH3 530 aa12.58□□□□□ -0.4
TTC28-207ENST00000490475 APBB1O00213 710 aa12.58□□□□□ -0.4
TTC28-207ENST00000490475 USP5P45974 858 aa12.58□□□□□ -0.4
TTC28-207ENST00000490475 MTFR1Q15390 333 aa12.58□□□□□ -0.4
TTC28-207ENST00000490475 MAPKAPK5Q8IW41 473 aa12.58□□□□□ -0.4
TTC28-207ENST00000490475 DOCK3Q8IZD9 2030 aa12.58□□□□□ -0.4
TTC28-207ENST00000490475 CLASRPQ8N2M8 674 aaKnown RBP12.58□□□□□ -0.4
TTC28-207ENST00000490475 EAF2Q96CJ1 260 aaPredicted RBP12.58□□□□□ -0.4
TTC28-207ENST00000490475 ASCC2Q9H1I8 757 aaPredicted RBP12.58□□□□□ -0.4
TTC28-207ENST00000490475 EHD4Q9H223 541 aa12.58□□□□□ -0.4
TTC28-207ENST00000490475 PCDHB15Q9Y5E8 787 aa12.58□□□□□ -0.4
TTC28-207ENST00000490475 NR2E3Q9Y5X4 410 aa12.58□□□□□ -0.4
TTC28-207ENST00000490475 MYH1P12882 1939 aa12.57□□□□□ -0.4
TTC28-207ENST00000490475 ECM2O94769 699 aaPredicted RBP12.57□□□□□ -0.4
TTC28-207ENST00000490475 SGPL1O95470 568 aa12.57□□□□□ -0.4
TTC28-207ENST00000490475 TREML2Q5T2D2 321 aa12.57□□□□□ -0.4
TTC28-207ENST00000490475 AACSQ86V21 672 aa12.57□□□□□ -0.4
TTC28-207ENST00000490475 TRMT44Q8IYL2 757 aaKnown RBP12.57□□□□□ -0.4
TTC28-207ENST00000490475 U2AF1L4Q8WU68 220 aaKnown RBP12.57□□□□□ -0.4
TTC28-207ENST00000490475 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.57□□□□□ -0.4
TTC28-207ENST00000490475 KIF1BPQ96EK5 621 aa12.57□□□□□ -0.4
TTC28-207ENST00000490475 CCDC8Q9H0W5 538 aaPredicted RBP12.57□□□□□ -0.4
TTC28-207ENST00000490475 BCL11AQ9H165 835 aa12.57□□□□□ -0.4
TTC28-207ENST00000490475 MORF4L1Q9UBU8 362 aa12.57□□□□□ -0.4
TTC28-207ENST00000490475 SERPINB13Q9UIV8 391 aa12.57□□□□□ -0.4
TTC28-207ENST00000490475 PALD1Q9ULE6 856 aa12.57□□□□□ -0.4
TTC28-207ENST00000490475 GABRQQ9UN88 632 aa12.57□□□□□ -0.4
TTC28-207ENST00000490475 MYO5AQ9Y4I1 1855 aaKnown RBP12.57□□□□□ -0.4
TTC28-207ENST00000490475 INHAP05111 366 aa12.56□□□□□ -0.4
TTC28-207ENST00000490475 USP14P54578 494 aa12.56□□□□□ -0.4
TTC28-207ENST00000490475 MTMR2Q13614 643 aa12.56□□□□□ -0.4
TTC28-207ENST00000490475 CCAR1Q8IX12 1150 aaKnown RBP12.56□□□□□ -0.4
TTC28-207ENST00000490475 MAGEB6Q8N7X4 407 aa12.56□□□□□ -0.4
TTC28-207ENST00000490475 RHPN1Q8TCX5 695 aa12.56□□□□□ -0.4
TTC28-207ENST00000490475 SOCS4Q8WXH5 440 aa12.56□□□□□ -0.4
TTC28-207ENST00000490475 DPF3Q92784 378 aa12.56□□□□□ -0.4
TTC28-207ENST00000490475 IL1RAPL2Q9NP60 686 aa12.56□□□□□ -0.4
TTC28-207ENST00000490475 PIH1D3Q9NQM4 214 aaKnown RBP12.56□□□□□ -0.4
TTC28-207ENST00000490475 ZBTB21Q9ULJ3 1066 aa12.56□□□□□ -0.4
TTC28-207ENST00000490475 RAB11FIP3O75154 756 aa12.55□□□□□ -0.4
TTC28-207ENST00000490475 FARP2O94887 1054 aaPredicted RBP12.55□□□□□ -0.4
TTC28-207ENST00000490475 HMGCRP04035 888 aa12.55□□□□□ -0.4
TTC28-207ENST00000490475 MAPK4P31152 587 aa12.55□□□□□ -0.4
TTC28-207ENST00000490475 USP17L2Q6R6M4 530 aa12.55□□□□□ -0.4
TTC28-207ENST00000490475 ADGRA1Q86SQ6 560 aa12.55□□□□□ -0.4
TTC28-207ENST00000490475 CCDC84Q86UT8 332 aaPredicted RBP12.55□□□□□ -0.4
TTC28-207ENST00000490475 ANKLE1Q8NAG6 615 aa12.55□□□□□ -0.4
TTC28-207ENST00000490475 GPRC5AQ8NFJ5 357 aa12.55□□□□□ -0.4
TTC28-207ENST00000490475 SHISA4Q96DD7 197 aa12.55□□□□□ -0.4
TTC28-207ENST00000490475 CABP5Q9NP86 173 aa12.55□□□□□ -0.4
TTC28-207ENST00000490475 TLR7Q9NYK1 1049 aaKnown RBP12.55□□□□□ -0.4
TTC28-207ENST00000490475 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.55□□□□□ -0.4
TTC28-207ENST00000490475 SIPA1L1O43166 1804 aa12.55□□□□□ -0.4
TTC28-207ENST00000490475 GLRX3O76003 335 aaKnown RBP12.54□□□□□ -0.4
TTC28-207ENST00000490475 TFRCP02786 760 aaKnown RBP12.54□□□□□ -0.4
TTC28-207ENST00000490475 IFIT2P09913 472 aaKnown RBP12.54□□□□□ -0.4
TTC28-207ENST00000490475 SLURP2P0DP57 97 aa12.54□□□□□ -0.4
TTC28-207ENST00000490475 XRCC5P13010 732 aaKnown RBP12.54□□□□□ -0.4
TTC28-207ENST00000490475 HERVK_113P62684 666 aa12.54□□□□□ -0.4
TTC28-207ENST00000490475 CCNA1P78396 465 aa12.54□□□□□ -0.4
TTC28-207ENST00000490475 TATDN1Q6P1N9 297 aa12.54□□□□□ -0.4
TTC28-207ENST00000490475 UBE2Q1Q7Z7E8 422 aa12.54□□□□□ -0.4
TTC28-207ENST00000490475 EXOC6Q8TAG9 804 aa12.54□□□□□ -0.4
TTC28-207ENST00000490475 FEZ1Q99689 392 aa12.54□□□□□ -0.4
TTC28-207ENST00000490475 NUDT12Q9BQG2 462 aa12.54□□□□□ -0.4
TTC28-207ENST00000490475 CRNKL1Q9BZJ0 848 aaKnown RBP12.54□□□□□ -0.4
TTC28-207ENST00000490475 UNC93B1Q9H1C4 597 aa12.54□□□□□ -0.4
TTC28-207ENST00000490475 DNAJC18Q9H819 358 aa12.54□□□□□ -0.4
TTC28-207ENST00000490475 PAK6Q9NQU5 681 aaPredicted RBP12.54□□□□□ -0.4
TTC28-207ENST00000490475 MAGEB6P1A0A0J9YX57 407 aa12.53□□□□□ -0.4
TTC28-207ENST00000490475 ELNP15502 786 aa12.53□□□□□ -0.4
TTC28-207ENST00000490475 DYNLL1P63167 89 aaKnown RBP12.53□□□□□ -0.4
TTC28-207ENST00000490475 IRX6P78412 446 aaPredicted RBP12.53□□□□□ -0.4
TTC28-207ENST00000490475 RRP1BQ14684 758 aaKnown RBP12.53□□□□□ -0.4
TTC28-207ENST00000490475 CERKLQ49MI3 558 aaPredicted RBP12.53□□□□□ -0.4
TTC28-207ENST00000490475 MIGA1Q8NAN2 632 aa12.53□□□□□ -0.4
TTC28-207ENST00000490475 C12orf42Q96LP6 360 aa12.53□□□□□ -0.4
TTC28-207ENST00000490475 DCTPP1Q9H773 170 aa12.53□□□□□ -0.4
TTC28-207ENST00000490475 HMX1Q9NP08 348 aaPredicted RBP12.53□□□□□ -0.4
TTC28-207ENST00000490475 SAP30BPQ9UHR5 308 aaKnown RBP12.53□□□□□ -0.4
TTC28-207ENST00000490475 RPTORQ8N122 1335 aa12.53□□□□□ -0.4
TTC28-207ENST00000490475 USP17L15C9J2P7 530 aa12.52□□□□□ -0.41
TTC28-207ENST00000490475 USP17L13C9JLJ4 530 aa12.52□□□□□ -0.41
TTC28-207ENST00000490475 USP17L11C9JVI0 530 aa12.52□□□□□ -0.41
TTC28-207ENST00000490475 USP17L18D6R9N7 530 aa12.52□□□□□ -0.41
TTC28-207ENST00000490475 USP17L22D6RA61 530 aa12.52□□□□□ -0.41
TTC28-207ENST00000490475 USP17L17D6RBQ6 530 aa12.52□□□□□ -0.41
TTC28-207ENST00000490475 USP17L19D6RCP7 530 aa12.52□□□□□ -0.41
TTC28-207ENST00000490475 USP17L20D6RJB6 530 aa12.52□□□□□ -0.41
TTC28-207ENST00000490475 H0YGN5 161 aa12.52□□□□□ -0.41
TTC28-207ENST00000490475 SMARCA5O60264 1052 aaPredicted RBP12.52□□□□□ -0.41
TTC28-207ENST00000490475 GDF11O95390 407 aa12.52□□□□□ -0.41
TTC28-207ENST00000490475 GH2P01242 217 aa12.52□□□□□ -0.41
TTC28-207ENST00000490475 POLR3DP05423 398 aaPredicted RBP12.52□□□□□ -0.41
TTC28-207ENST00000490475 USP17L24Q0WX57 530 aa12.52□□□□□ -0.41
TTC28-207ENST00000490475 ABCB5Q2M3G0 1257 aa12.52□□□□□ -0.41
TTC28-207ENST00000490475 SLC9C2Q5TAH2 1124 aa12.52□□□□□ -0.41
TTC28-207ENST00000490475 NECAB2Q7Z6G3 386 aa12.52□□□□□ -0.41
TTC28-207ENST00000490475 AMOTL1Q8IY63 956 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms