RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 RNF208Q9H0X6 261 aa13.71□□□□□ -0.21
DUBR-204ENST00000490441 SAP30BPQ9UHR5 308 aaKnown RBP13.71□□□□□ -0.21
DUBR-204ENST00000490441 TAOK2Q9UL54 1235 aa13.71□□□□□ -0.21
DUBR-204ENST00000490441 PALD1Q9ULE6 856 aa13.71□□□□□ -0.21
DUBR-204ENST00000490441 GABRQQ9UN88 632 aa13.71□□□□□ -0.21
DUBR-204ENST00000490441 GJB1P08034 283 aa13.7□□□□□ -0.22
DUBR-204ENST00000490441 USP5P45974 858 aa13.7□□□□□ -0.22
DUBR-204ENST00000490441 DYNLL1P63167 89 aaKnown RBP13.7□□□□□ -0.22
DUBR-204ENST00000490441 IRX3P78415 501 aaPredicted RBP13.7□□□□□ -0.22
DUBR-204ENST00000490441 MTMR2Q13614 643 aa13.7□□□□□ -0.22
DUBR-204ENST00000490441 RRP1BQ14684 758 aaKnown RBP13.7□□□□□ -0.22
DUBR-204ENST00000490441 TMED8Q6PL24 325 aaPredicted RBP13.7□□□□□ -0.22
DUBR-204ENST00000490441 MAGEB6Q8N7X4 407 aa13.7□□□□□ -0.22
DUBR-204ENST00000490441 MIGA1Q8NAN2 632 aa13.7□□□□□ -0.22
DUBR-204ENST00000490441 GINM1Q9NU53 330 aa13.7□□□□□ -0.22
DUBR-204ENST00000490441 MYO5AQ9Y4I1 1855 aaKnown RBP13.7□□□□□ -0.22
DUBR-204ENST00000490441 LOC285556D6RIA3 1793 aa13.69□□□□□ -0.22
DUBR-204ENST00000490441 HMMRO75330 724 aa13.69□□□□□ -0.22
DUBR-204ENST00000490441 GJA8P48165 433 aa13.69□□□□□ -0.22
DUBR-204ENST00000490441 BACE1P56817 501 aa13.69□□□□□ -0.22
DUBR-204ENST00000490441 IRF5Q13568 498 aa13.69□□□□□ -0.22
DUBR-204ENST00000490441 SH3D19Q5HYK7 790 aa13.69□□□□□ -0.22
DUBR-204ENST00000490441 WDR18Q9BV38 432 aa13.69□□□□□ -0.22
DUBR-204ENST00000490441 ASCC2Q9H1I8 757 aaPredicted RBP13.69□□□□□ -0.22
DUBR-204ENST00000490441 CDK5RAP2Q96SN8 1893 aa13.68□□□□□ -0.22
DUBR-204ENST00000490441 C19orf81C9J6K1 198 aa13.68□□□□□ -0.22
DUBR-204ENST00000490441 GDF11O95390 407 aa13.68□□□□□ -0.22
DUBR-204ENST00000490441 ELNP15502 786 aa13.68□□□□□ -0.22
DUBR-204ENST00000490441 TTF1Q15361 905 aaPredicted RBP13.68□□□□□ -0.22
DUBR-204ENST00000490441 METTL16Q86W50 562 aaKnown RBP13.68□□□□□ -0.22
DUBR-204ENST00000490441 CLASRPQ8N2M8 674 aaKnown RBP13.68□□□□□ -0.22
DUBR-204ENST00000490441 SPDYE1Q8NFV5 336 aaPredicted RBP13.68□□□□□ -0.22
DUBR-204ENST00000490441 RHPN1Q8TCX5 695 aa13.68□□□□□ -0.22
DUBR-204ENST00000490441 PXYLP1Q8TE99 480 aa13.68□□□□□ -0.22
DUBR-204ENST00000490441 SHISA4Q96DD7 197 aa13.68□□□□□ -0.22
DUBR-204ENST00000490441 CHMP4BQ9H444 224 aaKnown RBP13.68□□□□□ -0.22
DUBR-204ENST00000490441 DNAJC18Q9H819 358 aa13.68□□□□□ -0.22
DUBR-204ENST00000490441 IL1RAPL2Q9NP60 686 aa13.68□□□□□ -0.22
DUBR-204ENST00000490441 ZBTB21Q9ULJ3 1066 aa13.68□□□□□ -0.22
DUBR-204ENST00000490441 DDX19BQ9UMR2 479 aa13.68□□□□□ -0.22
DUBR-204ENST00000490441 NDUFB9Q9Y6M9 179 aa13.68□□□□□ -0.22
DUBR-204ENST00000490441 FOCADQ5VW36 1801 aa13.68□□□□□ -0.22
DUBR-204ENST00000490441 DOCK3Q8IZD9 2030 aa13.68□□□□□ -0.22
DUBR-204ENST00000490441 SIPA1L1O43166 1804 aa13.67□□□□□ -0.22
DUBR-204ENST00000490441 USP17L10C9JJH3 530 aa13.67□□□□□ -0.22
DUBR-204ENST00000490441 APBB1O00213 710 aa13.67□□□□□ -0.22
DUBR-204ENST00000490441 INHAP05111 366 aa13.67□□□□□ -0.22
DUBR-204ENST00000490441 HABP4Q5JVS0 413 aaKnown RBP13.67□□□□□ -0.22
DUBR-204ENST00000490441 RPAP2Q8IXW5 612 aaPredicted RBP13.67□□□□□ -0.22
DUBR-204ENST00000490441 U2AF1L4Q8WU68 220 aaKnown RBP13.67□□□□□ -0.22
DUBR-204ENST00000490441 DPF3Q92784 378 aa13.67□□□□□ -0.22
DUBR-204ENST00000490441 KIF1BPQ96EK5 621 aa13.67□□□□□ -0.22
DUBR-204ENST00000490441 HTATIP2Q9BUP3 242 aa13.67□□□□□ -0.22
DUBR-204ENST00000490441 BCL11AQ9H165 835 aa13.67□□□□□ -0.22
DUBR-204ENST00000490441 UNC93B1Q9H1C4 597 aa13.67□□□□□ -0.22
DUBR-204ENST00000490441 IFIT2P09913 472 aaKnown RBP13.66□□□□□ -0.22
DUBR-204ENST00000490441 TTC6Q86TZ1 520 aa13.66□□□□□ -0.22
DUBR-204ENST00000490441 FEZ1Q99689 392 aa13.66□□□□□ -0.22
DUBR-204ENST00000490441 ANTXR1Q9H6X2 564 aa13.66□□□□□ -0.22
DUBR-204ENST00000490441 PCDH10Q9P2E7 1040 aa13.66□□□□□ -0.22
DUBR-204ENST00000490441 SERPINB13Q9UIV8 391 aa13.66□□□□□ -0.22
DUBR-204ENST00000490441 MYH1P12882 1939 aa13.66□□□□□ -0.22
DUBR-204ENST00000490441 TRIOBPQ9H2D6 2365 aa13.66□□□□□ -0.22
DUBR-204ENST00000490441 FARP2O94887 1054 aaPredicted RBP13.65□□□□□ -0.22
DUBR-204ENST00000490441 GH2P01242 217 aa13.65□□□□□ -0.22
DUBR-204ENST00000490441 CAPN2P17655 700 aa13.65□□□□□ -0.22
DUBR-204ENST00000490441 HOXA7P31268 230 aaPredicted RBP13.65□□□□□ -0.22
DUBR-204ENST00000490441 CCAR1Q8IX12 1150 aaKnown RBP13.65□□□□□ -0.22
DUBR-204ENST00000490441 DNAJC2Q99543 621 aaKnown RBP13.65□□□□□ -0.22
DUBR-204ENST00000490441 EHD4Q9H223 541 aa13.65□□□□□ -0.22
DUBR-204ENST00000490441 MORF4L1Q9UBU8 362 aa13.65□□□□□ -0.22
DUBR-204ENST00000490441 COG6Q9Y2V7 657 aa13.65□□□□□ -0.22
DUBR-204ENST00000490441 MAGEB6P1A0A0J9YX57 407 aa13.64□□□□□ -0.23
DUBR-204ENST00000490441 H0YGN5 161 aa13.64□□□□□ -0.23
DUBR-204ENST00000490441 RAB11FIP3O75154 756 aa13.64□□□□□ -0.23
DUBR-204ENST00000490441 SGPL1O95470 568 aa13.64□□□□□ -0.23
DUBR-204ENST00000490441 TFRCP02786 760 aaKnown RBP13.64□□□□□ -0.23
DUBR-204ENST00000490441 HMGCRP04035 888 aa13.64□□□□□ -0.23
DUBR-204ENST00000490441 POLR3DP05423 398 aaPredicted RBP13.64□□□□□ -0.23
DUBR-204ENST00000490441 HERVK_113P62684 666 aa13.64□□□□□ -0.23
DUBR-204ENST00000490441 JAG1P78504 1218 aa13.64□□□□□ -0.23
DUBR-204ENST00000490441 SHROOM1Q2M3G4 852 aaPredicted RBP13.64□□□□□ -0.23
DUBR-204ENST00000490441 SLC9C2Q5TAH2 1124 aa13.64□□□□□ -0.23
DUBR-204ENST00000490441 USP17L2Q6R6M4 530 aa13.64□□□□□ -0.23
DUBR-204ENST00000490441 GPRC5AQ8NFJ5 357 aa13.64□□□□□ -0.23
DUBR-204ENST00000490441 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.64□□□□□ -0.23
DUBR-204ENST00000490441 GTF3C2Q8WUA4 911 aaPredicted RBP13.64□□□□□ -0.23
DUBR-204ENST00000490441 DEFB118Q96PH6 123 aa13.64□□□□□ -0.23
DUBR-204ENST00000490441 P2RX7Q99572 595 aaKnown RBP13.64□□□□□ -0.23
DUBR-204ENST00000490441 CRNKL1Q9BZJ0 848 aaKnown RBP13.64□□□□□ -0.23
DUBR-204ENST00000490441 CABP5Q9NP86 173 aa13.64□□□□□ -0.23
DUBR-204ENST00000490441 GOLIM4O00461 696 aa13.63□□□□□ -0.23
DUBR-204ENST00000490441 PDE6AP16499 860 aa13.63□□□□□ -0.23
DUBR-204ENST00000490441 USP14P54578 494 aa13.63□□□□□ -0.23
DUBR-204ENST00000490441 PDE3AQ14432 1141 aa13.63□□□□□ -0.23
DUBR-204ENST00000490441 RAB3GAP1Q15042 981 aa13.63□□□□□ -0.23
DUBR-204ENST00000490441 ABCB5Q2M3G0 1257 aa13.63□□□□□ -0.23
DUBR-204ENST00000490441 CERKLQ49MI3 558 aaPredicted RBP13.63□□□□□ -0.23
DUBR-204ENST00000490441 CWC22Q9HCG8 908 aaKnown RBP13.63□□□□□ -0.23
DUBR-204ENST00000490441 ZBTB40Q9NUA8 1239 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms