RNA–Protein interactions for RNA: ENST00000490387.1

RAPGEF3-212, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-212ENST00000490387 TRIM17Q9Y577 477 aa20.4■□□□□ 0.86
RAPGEF3-212ENST00000490387 HSPD1P10809 573 aaKnown RBP20.39■□□□□ 0.85
RAPGEF3-212ENST00000490387 MLLT1Q03111 559 aaPredicted RBP20.39■□□□□ 0.85
RAPGEF3-212ENST00000490387 FAM43AQ8N2R8 423 aa20.39■□□□□ 0.85
RAPGEF3-212ENST00000490387 ZMYM6O95789 1325 aa20.38■□□□□ 0.85
RAPGEF3-212ENST00000490387 SOX10P56693 466 aa20.38■□□□□ 0.85
RAPGEF3-212ENST00000490387 SP3Q02447 781 aa20.38■□□□□ 0.85
RAPGEF3-212ENST00000490387 ALX1Q15699 326 aa20.38■□□□□ 0.85
RAPGEF3-212ENST00000490387 NOL9Q5SY16 702 aaKnown RBP20.38■□□□□ 0.85
RAPGEF3-212ENST00000490387 IFNL3Q8IZI9 196 aa20.38■□□□□ 0.85
RAPGEF3-212ENST00000490387 CD99L2Q8TCZ2 262 aa20.38■□□□□ 0.85
RAPGEF3-212ENST00000490387 DHX36Q9H2U1 1008 aaKnown RBP20.38■□□□□ 0.85
RAPGEF3-212ENST00000490387 PALD1Q9ULE6 856 aa20.38■□□□□ 0.85
RAPGEF3-212ENST00000490387 LAMA4Q16363 1823 aa20.38■□□□□ 0.85
RAPGEF3-212ENST00000490387 CASC1Q6TDU7 716 aa20.37■□□□□ 0.85
RAPGEF3-212ENST00000490387 OTOP1Q7RTM1 612 aa20.37■□□□□ 0.85
RAPGEF3-212ENST00000490387 DSCC1Q9BVC3 393 aa20.37■□□□□ 0.85
RAPGEF3-212ENST00000490387 MCM9Q9NXL9 1143 aa20.37■□□□□ 0.85
RAPGEF3-212ENST00000490387 SAP30BPQ9UHR5 308 aaKnown RBP20.37■□□□□ 0.85
RAPGEF3-212ENST00000490387 BTBD19C9JJ37 291 aa20.36■□□□□ 0.85
RAPGEF3-212ENST00000490387 MAP3K10Q02779 954 aa20.36■□□□□ 0.85
RAPGEF3-212ENST00000490387 SBK1Q52WX2 424 aa20.36■□□□□ 0.85
RAPGEF3-212ENST00000490387 CTR9Q6PD62 1173 aa20.36■□□□□ 0.85
RAPGEF3-212ENST00000490387 METTL16Q86W50 562 aaKnown RBP20.36■□□□□ 0.85
RAPGEF3-212ENST00000490387 ZCCHC17Q9NP64 241 aaKnown RBP20.36■□□□□ 0.85
RAPGEF3-212ENST00000490387 DOCK1Q14185 1865 aa20.36■□□□□ 0.85
RAPGEF3-212ENST00000490387 USP17L12C9JPN9 530 aa20.35■□□□□ 0.85
RAPGEF3-212ENST00000490387 USP17L21D6R901 530 aa20.35■□□□□ 0.85
RAPGEF3-212ENST00000490387 PTH1RQ03431 593 aa20.35■□□□□ 0.85
RAPGEF3-212ENST00000490387 EVX2Q03828 476 aa20.35■□□□□ 0.85
RAPGEF3-212ENST00000490387 C12orf60Q5U649 245 aa20.35■□□□□ 0.85
RAPGEF3-212ENST00000490387 NACAP1Q9BZK3 213 aa20.35■□□□□ 0.85
RAPGEF3-212ENST00000490387 LSG1Q9H089 658 aaKnown RBP20.35■□□□□ 0.85
RAPGEF3-212ENST00000490387 PICK1Q9NRD5 415 aa20.35■□□□□ 0.85
RAPGEF3-212ENST00000490387 ARPP21Q9UBL0 812 aaPredicted RBP20.35■□□□□ 0.85
RAPGEF3-212ENST00000490387 ROBO3Q96MS0 1386 aa20.34■□□□□ 0.85
RAPGEF3-212ENST00000490387 PHF20L1A8MW92 1017 aa20.34■□□□□ 0.85
RAPGEF3-212ENST00000490387 FGAP02671 866 aa20.34■□□□□ 0.85
RAPGEF3-212ENST00000490387 APPP05067 770 aa20.34■□□□□ 0.85
RAPGEF3-212ENST00000490387 CYP2D6P10635 497 aa20.34■□□□□ 0.85
RAPGEF3-212ENST00000490387 TDO2P48775 406 aa20.34■□□□□ 0.85
RAPGEF3-212ENST00000490387 PLCD1P51178 756 aa20.34■□□□□ 0.85
RAPGEF3-212ENST00000490387 SCYL3Q8IZE3 742 aa20.34■□□□□ 0.85
RAPGEF3-212ENST00000490387 DDRGK1Q96HY6 314 aa20.34■□□□□ 0.85
RAPGEF3-212ENST00000490387 EHD4Q9H223 541 aa20.34■□□□□ 0.85
RAPGEF3-212ENST00000490387 EFCC1Q9HA90 598 aa20.34■□□□□ 0.85
RAPGEF3-212ENST00000490387 PI4KBQ9UBF8 816 aa20.34■□□□□ 0.85
RAPGEF3-212ENST00000490387 KCNH4Q9UQ05 1017 aa20.34■□□□□ 0.85
RAPGEF3-212ENST00000490387 CYP2D7A0A087X1C5 515 aa20.33■□□□□ 0.85
RAPGEF3-212ENST00000490387 SMIM22K7EJ46 135 aa20.33■□□□□ 0.85
RAPGEF3-212ENST00000490387 TBC1D12O60347 775 aa20.33■□□□□ 0.85
RAPGEF3-212ENST00000490387 SLURP2P0DP57 97 aa20.33■□□□□ 0.85
RAPGEF3-212ENST00000490387 GABPAQ06546 454 aa20.33■□□□□ 0.85
RAPGEF3-212ENST00000490387 C8orf34Q49A92 452 aa20.33■□□□□ 0.85
RAPGEF3-212ENST00000490387 TTC6Q86TZ1 520 aa20.33■□□□□ 0.85
RAPGEF3-212ENST00000490387 NAPBQ9H115 298 aa20.33■□□□□ 0.85
RAPGEF3-212ENST00000490387 DNAJC18Q9H819 358 aa20.33■□□□□ 0.85
RAPGEF3-212ENST00000490387 TLR2O60603 784 aa20.32■□□□□ 0.84
RAPGEF3-212ENST00000490387 POLR3DP05423 398 aaPredicted RBP20.32■□□□□ 0.84
RAPGEF3-212ENST00000490387 HLA-DOAP06340 250 aa20.32■□□□□ 0.84
RAPGEF3-212ENST00000490387 SLC4A8Q2Y0W8 1093 aa20.32■□□□□ 0.84
RAPGEF3-212ENST00000490387 ANKRD23Q86SG2 305 aa20.32■□□□□ 0.84
RAPGEF3-212ENST00000490387 MAP4K1Q92918 833 aa20.32■□□□□ 0.84
RAPGEF3-212ENST00000490387 CXCL11O14625 94 aa20.31■□□□□ 0.84
RAPGEF3-212ENST00000490387 ARHGEF6Q15052 776 aa20.31■□□□□ 0.84
RAPGEF3-212ENST00000490387 FOXP4Q8IVH2 680 aaPredicted RBP20.31■□□□□ 0.84
RAPGEF3-212ENST00000490387 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.31■□□□□ 0.84
RAPGEF3-212ENST00000490387 HERC5Q9UII4 1024 aaKnown RBP20.31■□□□□ 0.84
RAPGEF3-212ENST00000490387 SERPINB13Q9UIV8 391 aa20.31■□□□□ 0.84
RAPGEF3-212ENST00000490387 ANAPC4Q9UJX5 808 aa20.31■□□□□ 0.84
RAPGEF3-212ENST00000490387 TAOK2Q9UL54 1235 aa20.31■□□□□ 0.84
RAPGEF3-212ENST00000490387 PTPN22Q9Y2R2 807 aa20.31■□□□□ 0.84
RAPGEF3-212ENST00000490387 ZHX2Q9Y6X8 837 aa20.31■□□□□ 0.84
RAPGEF3-212ENST00000490387 PTPRFP10586 1907 aa20.31■□□□□ 0.84
RAPGEF3-212ENST00000490387 MYH8P13535 1937 aa20.31■□□□□ 0.84
RAPGEF3-212ENST00000490387 PHIPQ8WWQ0 1821 aa20.3■□□□□ 0.84
RAPGEF3-212ENST00000490387 ATAD5Q96QE3 1844 aa20.3■□□□□ 0.84
RAPGEF3-212ENST00000490387 PDHXO00330 501 aa20.3■□□□□ 0.84
RAPGEF3-212ENST00000490387 CTNND1O60716 968 aaKnown RBP20.3■□□□□ 0.84
RAPGEF3-212ENST00000490387 PTPRAP18433 802 aa20.3■□□□□ 0.84
RAPGEF3-212ENST00000490387 PPARAQ07869 468 aa20.3■□□□□ 0.84
RAPGEF3-212ENST00000490387 NBPF3Q9H094 633 aa20.3■□□□□ 0.84
RAPGEF3-212ENST00000490387 ANO2Q9NQ90 1003 aa20.3■□□□□ 0.84
RAPGEF3-212ENST00000490387 FAM196BA6NMK8 535 aa20.29■□□□□ 0.84
RAPGEF3-212ENST00000490387 CAP1Q01518 475 aa20.29■□□□□ 0.84
RAPGEF3-212ENST00000490387 KIF22Q14807 665 aa20.29■□□□□ 0.84
RAPGEF3-212ENST00000490387 KIAA1211Q6ZU35 1233 aa20.29■□□□□ 0.84
RAPGEF3-212ENST00000490387 C16orf86Q6ZW13 317 aa20.29■□□□□ 0.84
RAPGEF3-212ENST00000490387 AMOTL1Q8IY63 956 aa20.29■□□□□ 0.84
RAPGEF3-212ENST00000490387 U3KPZ7 1027 aaPredicted RBP20.29■□□□□ 0.84
RAPGEF3-212ENST00000490387 ZSWIM8A7E2V4 1837 aa20.28■□□□□ 0.84
RAPGEF3-212ENST00000490387 MINDY4BA8MYZ0 360 aa20.28■□□□□ 0.84
RAPGEF3-212ENST00000490387 DYNLL2Q96FJ2 89 aa20.28■□□□□ 0.84
RAPGEF3-212ENST00000490387 CTNNA3Q9UI47 895 aa20.28■□□□□ 0.84
RAPGEF3-212ENST00000490387 RBM8AQ9Y5S9 174 aaKnown RBP20.28■□□□□ 0.84
RAPGEF3-212ENST00000490387 REC8O95072 547 aa20.27■□□□□ 0.84
RAPGEF3-212ENST00000490387 SHMT1P34896 483 aa20.27■□□□□ 0.84
RAPGEF3-212ENST00000490387 MOGSQ13724 837 aa20.27■□□□□ 0.84
RAPGEF3-212ENST00000490387 TATDN1Q6P1N9 297 aa20.27■□□□□ 0.84
RAPGEF3-212ENST00000490387 FASTKD5Q7L8L6 764 aaKnown RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms