RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 NAPBQ9H115 298 aa17.19■□□□□ 0.34
SRGAP3-208ENST00000490348 PICK1Q9NRD5 415 aa17.19■□□□□ 0.34
SRGAP3-208ENST00000490348 WBP1LQ9NX94 342 aa17.19■□□□□ 0.34
SRGAP3-208ENST00000490348 CDK8P49336 464 aa17.18■□□□□ 0.34
SRGAP3-208ENST00000490348 ZBTB21Q9ULJ3 1066 aa17.18■□□□□ 0.34
SRGAP3-208ENST00000490348 AFG3L2Q9Y4W6 797 aa17.18■□□□□ 0.34
SRGAP3-208ENST00000490348 ZHX2Q9Y6X8 837 aa17.18■□□□□ 0.34
SRGAP3-208ENST00000490348 GH2P01242 217 aa17.17■□□□□ 0.34
SRGAP3-208ENST00000490348 GUCY1A2P33402 732 aa17.17■□□□□ 0.34
SRGAP3-208ENST00000490348 TM4SF4P48230 202 aa17.17■□□□□ 0.34
SRGAP3-208ENST00000490348 CERKLQ49MI3 558 aaPredicted RBP17.17■□□□□ 0.34
SRGAP3-208ENST00000490348 AMOTL1Q8IY63 956 aa17.17■□□□□ 0.34
SRGAP3-208ENST00000490348 STK11IPQ8N1F8 1099 aa17.17■□□□□ 0.34
SRGAP3-208ENST00000490348 PTPN18Q99952 460 aa17.17■□□□□ 0.34
SRGAP3-208ENST00000490348 SWAP70Q9UH65 585 aa17.17■□□□□ 0.34
SRGAP3-208ENST00000490348 KCNH4Q9UQ05 1017 aa17.17■□□□□ 0.34
SRGAP3-208ENST00000490348 TACC3Q9Y6A5 838 aa17.17■□□□□ 0.34
SRGAP3-208ENST00000490348 TESPA1A2RU30 521 aaPredicted RBP17.16■□□□□ 0.34
SRGAP3-208ENST00000490348 SGSM2O43147 1006 aa17.16■□□□□ 0.34
SRGAP3-208ENST00000490348 ASNSP08243 561 aa17.16■□□□□ 0.34
SRGAP3-208ENST00000490348 PPARAQ07869 468 aa17.16■□□□□ 0.34
SRGAP3-208ENST00000490348 MOGSQ13724 837 aa17.16■□□□□ 0.34
SRGAP3-208ENST00000490348 BRI3BPQ8WY22 251 aa17.16■□□□□ 0.34
SRGAP3-208ENST00000490348 TAOK2Q9UL54 1235 aa17.16■□□□□ 0.34
SRGAP3-208ENST00000490348 ZMYM6O95789 1325 aa17.16■□□□□ 0.34
SRGAP3-208ENST00000490348 RAD50Q92878 1312 aa17.16■□□□□ 0.34
SRGAP3-208ENST00000490348 MANSC4A6NHS7 340 aaPredicted RBP17.15■□□□□ 0.34
SRGAP3-208ENST00000490348 IGF2BP3O00425 579 aaKnown RBP eCLIP17.15■□□□□ 0.34
SRGAP3-208ENST00000490348 AKR1B1P15121 316 aa17.15■□□□□ 0.34
SRGAP3-208ENST00000490348 MFAP1P55081 439 aaKnown RBP17.15■□□□□ 0.34
SRGAP3-208ENST00000490348 MAP2K1Q02750 393 aaPredicted RBP17.15■□□□□ 0.34
SRGAP3-208ENST00000490348 ABCB5Q2M3G0 1257 aa17.15■□□□□ 0.34
SRGAP3-208ENST00000490348 NBPF3Q9H094 633 aa17.15■□□□□ 0.34
SRGAP3-208ENST00000490348 RASA1P20936 1047 aa17.15■□□□□ 0.34
SRGAP3-208ENST00000490348 GTF2A2P52657 109 aa17.15■□□□□ 0.34
SRGAP3-208ENST00000490348 CTDSPL2Q05D32 466 aa17.15■□□□□ 0.34
SRGAP3-208ENST00000490348 INCENPQ9NQS7 918 aa17.15■□□□□ 0.34
SRGAP3-208ENST00000490348 ANAPC4Q9UJX5 808 aa17.15■□□□□ 0.34
SRGAP3-208ENST00000490348 TRIM75PA6NK02 468 aa17.14■□□□□ 0.33
SRGAP3-208ENST00000490348 USP17L5A8MUK1 530 aa17.14■□□□□ 0.33
SRGAP3-208ENST00000490348 PRDM1O75626 825 aa17.14■□□□□ 0.33
SRGAP3-208ENST00000490348 HSPA1AP0DMV8 641 aaKnown RBP17.14■□□□□ 0.33
SRGAP3-208ENST00000490348 HSPA1BP0DMV9 641 aaKnown RBP17.14■□□□□ 0.33
SRGAP3-208ENST00000490348 PTH1RQ03431 593 aa17.14■□□□□ 0.33
SRGAP3-208ENST00000490348 SREBF2Q12772 1141 aa17.14■□□□□ 0.33
SRGAP3-208ENST00000490348 SNAPC2Q13487 334 aa17.14■□□□□ 0.33
SRGAP3-208ENST00000490348 IFNL1Q8IU54 200 aa17.14■□□□□ 0.33
SRGAP3-208ENST00000490348 DSCC1Q9BVC3 393 aa17.14■□□□□ 0.33
SRGAP3-208ENST00000490348 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.14■□□□□ 0.33
SRGAP3-208ENST00000490348 GINM1Q9NU53 330 aa17.14■□□□□ 0.33
SRGAP3-208ENST00000490348 PTPRFP10586 1907 aa17.14■□□□□ 0.33
SRGAP3-208ENST00000490348 CCL15-CCL14A0A0B4J2E2 113 aa17.13■□□□□ 0.33
SRGAP3-208ENST00000490348 A0A0G2JLL6 359 aaPredicted RBP17.13■□□□□ 0.33
SRGAP3-208ENST00000490348 CXCL11O14625 94 aa17.13■□□□□ 0.33
SRGAP3-208ENST00000490348 SPP2Q13103 211 aa17.13■□□□□ 0.33
SRGAP3-208ENST00000490348 DGKZQ13574 1117 aa17.13■□□□□ 0.33
SRGAP3-208ENST00000490348 SEPT2Q15019 361 aa17.13■□□□□ 0.33
SRGAP3-208ENST00000490348 RAB3GAP1Q15042 981 aa17.13■□□□□ 0.33
SRGAP3-208ENST00000490348 CCL15Q16663 113 aa17.13■□□□□ 0.33
SRGAP3-208ENST00000490348 PRRT2Q7Z6L0 340 aaPredicted RBP17.13■□□□□ 0.33
SRGAP3-208ENST00000490348 CLEC10AQ8IUN9 316 aa17.13■□□□□ 0.33
SRGAP3-208ENST00000490348 REM2Q8IYK8 340 aaPredicted RBP17.13■□□□□ 0.33
SRGAP3-208ENST00000490348 ZNF280CQ8ND82 737 aa17.13■□□□□ 0.33
SRGAP3-208ENST00000490348 RUFY2Q8WXA3 655 aa17.13■□□□□ 0.33
SRGAP3-208ENST00000490348 ESYT1Q9BSJ8 1104 aa17.13■□□□□ 0.33
SRGAP3-208ENST00000490348 WDR18Q9BV38 432 aa17.13■□□□□ 0.33
SRGAP3-208ENST00000490348 RNF186Q9NXI6 227 aa17.13■□□□□ 0.33
SRGAP3-208ENST00000490348 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.13■□□□□ 0.33
SRGAP3-208ENST00000490348 MYH8P13535 1937 aa17.13■□□□□ 0.33
SRGAP3-208ENST00000490348 CETPP11597 493 aa17.12■□□□□ 0.33
SRGAP3-208ENST00000490348 INHBEP58166 350 aa17.12■□□□□ 0.33
SRGAP3-208ENST00000490348 HAND2P61296 217 aa17.12■□□□□ 0.33
SRGAP3-208ENST00000490348 FAM43AQ8N2R8 423 aa17.12■□□□□ 0.33
SRGAP3-208ENST00000490348 HTTP42858 3142 aa17.12■□□□□ 0.33
SRGAP3-208ENST00000490348 MPHOSPH10O00566 681 aaKnown RBP17.11■□□□□ 0.33
SRGAP3-208ENST00000490348 FOXN1O15353 648 aa17.11■□□□□ 0.33
SRGAP3-208ENST00000490348 SIAH1Q8IUQ4 282 aa17.11■□□□□ 0.33
SRGAP3-208ENST00000490348 TBC1D10CQ8IV04 446 aa17.11■□□□□ 0.33
SRGAP3-208ENST00000490348 NKX2-3Q8TAU0 364 aa17.11■□□□□ 0.33
SRGAP3-208ENST00000490348 ACER1Q8TDN7 264 aa17.11■□□□□ 0.33
SRGAP3-208ENST00000490348 MKNK2Q9HBH9 465 aa17.11■□□□□ 0.33
SRGAP3-208ENST00000490348 GREB1LQ9C091 1923 aaPredicted RBP17.11■□□□□ 0.33
SRGAP3-208ENST00000490348 BTBD19C9JJ37 291 aa17.11■□□□□ 0.33
SRGAP3-208ENST00000490348 CDC45O75419 566 aa17.11■□□□□ 0.33
SRGAP3-208ENST00000490348 TRPA1O75762 1119 aa17.11■□□□□ 0.33
SRGAP3-208ENST00000490348 FGRP09769 529 aa17.11■□□□□ 0.33
SRGAP3-208ENST00000490348 MTMR2Q13614 643 aa17.11■□□□□ 0.33
SRGAP3-208ENST00000490348 GPAT2Q6NUI2 795 aa17.11■□□□□ 0.33
SRGAP3-208ENST00000490348 TMEM179Q6ZVK1 233 aa17.11■□□□□ 0.33
SRGAP3-208ENST00000490348 CCDC17Q96LX7 622 aa17.11■□□□□ 0.33
SRGAP3-208ENST00000490348 TBC1D2Q9BYX2 928 aa17.11■□□□□ 0.33
SRGAP3-208ENST00000490348 CABP5Q9NP86 173 aa17.11■□□□□ 0.33
SRGAP3-208ENST00000490348 TSKSQ9UJT2 592 aa17.11■□□□□ 0.33
SRGAP3-208ENST00000490348 CENPFP49454 3210 aa17.1■□□□□ 0.33
SRGAP3-208ENST00000490348 A0A1W2PRG0 241 aa17.1■□□□□ 0.33
SRGAP3-208ENST00000490348 HMGCS2P54868 508 aa17.1■□□□□ 0.33
SRGAP3-208ENST00000490348 BACE1P56817 501 aa17.1■□□□□ 0.33
SRGAP3-208ENST00000490348 LSG1Q9H089 658 aaKnown RBP17.1■□□□□ 0.33
SRGAP3-208ENST00000490348 R3HDMLQ9H3Y0 253 aa17.1■□□□□ 0.33
SRGAP3-208ENST00000490348 LAMA4Q16363 1823 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms