RNA–Protein interactions for RNA: ENST00000490305.5

HLA-DOA-205, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-205ENST00000490305 CLRN2A0PK11 232 aa15.54■□□□□ 0.08
HLA-DOA-205ENST00000490305 GOLGA8BA8MQT2 603 aa15.54■□□□□ 0.08
HLA-DOA-205ENST00000490305 TCP10L2B9ZVM9 353 aa15.54■□□□□ 0.08
HLA-DOA-205ENST00000490305 DDIT3P35638 169 aa15.54■□□□□ 0.08
HLA-DOA-205ENST00000490305 STK3Q13188 491 aa15.54■□□□□ 0.08
HLA-DOA-205ENST00000490305 TNFAIP1Q13829 316 aa15.54■□□□□ 0.08
HLA-DOA-205ENST00000490305 SEC23AQ15436 765 aa15.54■□□□□ 0.08
HLA-DOA-205ENST00000490305 KIF4BQ2VIQ3 1234 aa15.54■□□□□ 0.08
HLA-DOA-205ENST00000490305 FAM47AQ5JRC9 791 aa15.54■□□□□ 0.08
HLA-DOA-205ENST00000490305 IFIT1BQ5T764 474 aaKnown RBP15.54■□□□□ 0.08
HLA-DOA-205ENST00000490305 CRACR2BQ8N4Y2 399 aaPredicted RBP15.54■□□□□ 0.08
HLA-DOA-205ENST00000490305 NECAB1Q8N987 351 aa15.54■□□□□ 0.08
HLA-DOA-205ENST00000490305 ZKSCAN3Q9BRR0 538 aa15.54■□□□□ 0.08
HLA-DOA-205ENST00000490305 VEZTQ9HBM0 779 aa15.54■□□□□ 0.08
HLA-DOA-205ENST00000490305 GPHNQ9NQX3 736 aaPredicted RBP15.54■□□□□ 0.08
HLA-DOA-205ENST00000490305 BRPF3Q9ULD4 1205 aa15.54■□□□□ 0.08
HLA-DOA-205ENST00000490305 SLC12A7Q9Y666 1083 aa15.54■□□□□ 0.08
HLA-DOA-205ENST00000490305 ZBTB43O43298 467 aa15.53■□□□□ 0.08
HLA-DOA-205ENST00000490305 PDIA4P13667 645 aaKnown RBP15.53■□□□□ 0.08
HLA-DOA-205ENST00000490305 LMOD1P29536 600 aaPredicted RBP15.53■□□□□ 0.08
HLA-DOA-205ENST00000490305 SCRN1Q12765 414 aa15.53■□□□□ 0.08
HLA-DOA-205ENST00000490305 PPP4R3BQ5MIZ7 849 aa15.53■□□□□ 0.08
HLA-DOA-205ENST00000490305 RBM26Q5T8P6 1007 aaKnown RBP15.53■□□□□ 0.08
HLA-DOA-205ENST00000490305 APOA5Q6Q788 366 aa15.53■□□□□ 0.08
HLA-DOA-205ENST00000490305 DGKHQ86XP1 1220 aa15.53■□□□□ 0.08
HLA-DOA-205ENST00000490305 ZFPM1Q8IX07 1006 aa15.53■□□□□ 0.08
HLA-DOA-205ENST00000490305 ENAHQ8N8S7 591 aaPredicted RBP15.53■□□□□ 0.08
HLA-DOA-205ENST00000490305 SLC44A5Q8NCS7 719 aa15.53■□□□□ 0.08
HLA-DOA-205ENST00000490305 NEDD1Q8NHV4 660 aa15.53■□□□□ 0.08
HLA-DOA-205ENST00000490305 CCDC17Q96LX7 622 aa15.53■□□□□ 0.08
HLA-DOA-205ENST00000490305 SIPA1L1O43166 1804 aa15.52■□□□□ 0.08
HLA-DOA-205ENST00000490305 SHTN1A0MZ66 631 aa15.52■□□□□ 0.08
HLA-DOA-205ENST00000490305 DDTLA6NHG4 134 aaPredicted RBP15.52■□□□□ 0.08
HLA-DOA-205ENST00000490305 CALM1P0DP23 149 aa15.52■□□□□ 0.08
HLA-DOA-205ENST00000490305 CALM2P0DP24 149 aa15.52■□□□□ 0.08
HLA-DOA-205ENST00000490305 CALM3P0DP25 149 aa15.52■□□□□ 0.08
HLA-DOA-205ENST00000490305 NUCB2P80303 420 aa15.52■□□□□ 0.08
HLA-DOA-205ENST00000490305 ST3GAL1Q11201 340 aa15.52■□□□□ 0.08
HLA-DOA-205ENST00000490305 PPP2R5BQ15173 497 aa15.52■□□□□ 0.08
HLA-DOA-205ENST00000490305 NBPF9Q3BBW0 867 aa15.52■□□□□ 0.08
HLA-DOA-205ENST00000490305 TBC1D10BQ4KMP7 808 aaPredicted RBP15.52■□□□□ 0.08
HLA-DOA-205ENST00000490305 DPY19L2Q6NUT2 758 aa15.52■□□□□ 0.08
HLA-DOA-205ENST00000490305 CPLX2Q6PUV4 134 aaKnown RBP15.52■□□□□ 0.08
HLA-DOA-205ENST00000490305 SH3BP5LQ7L8J4 393 aa15.52■□□□□ 0.08
HLA-DOA-205ENST00000490305 CATIPQ7Z7H3 387 aa15.52■□□□□ 0.08
HLA-DOA-205ENST00000490305 METTL16Q86W50 562 aaKnown RBP15.52■□□□□ 0.08
HLA-DOA-205ENST00000490305 ANKS1AQ92625 1134 aa15.52■□□□□ 0.08
HLA-DOA-205ENST00000490305 HERC5Q9UII4 1024 aaKnown RBP15.52■□□□□ 0.08
HLA-DOA-205ENST00000490305 NID2Q14112 1375 aa15.51■□□□□ 0.07
HLA-DOA-205ENST00000490305 PLIN4Q96Q06 1357 aa15.51■□□□□ 0.07
HLA-DOA-205ENST00000490305 METAP2P50579 478 aaKnown RBP eCLIP15.51■□□□□ 0.07
HLA-DOA-205ENST00000490305 CCT2P78371 535 aaKnown RBP15.51■□□□□ 0.07
HLA-DOA-205ENST00000490305 SAMD7Q7Z3H4 446 aa15.51■□□□□ 0.07
HLA-DOA-205ENST00000490305 CSRNP1Q96S65 589 aa15.51■□□□□ 0.07
HLA-DOA-205ENST00000490305 HPS5Q9UPZ3 1129 aa15.51■□□□□ 0.07
HLA-DOA-205ENST00000490305 CNTNAP1P78357 1384 aa15.5■□□□□ 0.07
HLA-DOA-205ENST00000490305 CCDC196A0A1B0GTZ2 297 aa15.5■□□□□ 0.07
HLA-DOA-205ENST00000490305 GOLGA8AA7E2F4 631 aa15.5■□□□□ 0.07
HLA-DOA-205ENST00000490305 CPLX1O14810 134 aa15.5■□□□□ 0.07
HLA-DOA-205ENST00000490305 CDKL5O76039 1030 aa15.5■□□□□ 0.07
HLA-DOA-205ENST00000490305 DDAH1O94760 285 aa15.5■□□□□ 0.07
HLA-DOA-205ENST00000490305 DDNO94850 711 aaPredicted RBP15.5■□□□□ 0.07
HLA-DOA-205ENST00000490305 SHMT1P34896 483 aa15.5■□□□□ 0.07
HLA-DOA-205ENST00000490305 HMGN5P82970 282 aaKnown RBP15.5■□□□□ 0.07
HLA-DOA-205ENST00000490305 TATDN1Q6P1N9 297 aa15.5■□□□□ 0.07
HLA-DOA-205ENST00000490305 APOBEC3FQ8IUX4 373 aaKnown RBP15.5■□□□□ 0.07
HLA-DOA-205ENST00000490305 ZNF654Q8IZM8 581 aa15.5■□□□□ 0.07
HLA-DOA-205ENST00000490305 KAT14Q9H8E8 782 aa15.5■□□□□ 0.07
HLA-DOA-205ENST00000490305 SENP2Q9HC62 589 aa15.5■□□□□ 0.07
HLA-DOA-205ENST00000490305 KIF3AQ9Y496 699 aa15.5■□□□□ 0.07
HLA-DOA-205ENST00000490305 TBC1D12O60347 775 aa15.49■□□□□ 0.07
HLA-DOA-205ENST00000490305 PDCP20941 246 aa15.49■□□□□ 0.07
HLA-DOA-205ENST00000490305 GJB2P29033 226 aa15.49■□□□□ 0.07
HLA-DOA-205ENST00000490305 CERKLQ49MI3 558 aaPredicted RBP15.49■□□□□ 0.07
HLA-DOA-205ENST00000490305 MICU3Q86XE3 530 aa15.49■□□□□ 0.07
HLA-DOA-205ENST00000490305 SMARCC2Q8TAQ2 1214 aa15.49■□□□□ 0.07
HLA-DOA-205ENST00000490305 ADARB2Q9NS39 739 aaKnown RBP15.49■□□□□ 0.07
HLA-DOA-205ENST00000490305 HACL1Q9UJ83 578 aa15.49■□□□□ 0.07
HLA-DOA-205ENST00000490305 NMT2O60551 498 aa15.48■□□□□ 0.07
HLA-DOA-205ENST00000490305 EGFRP00533 1210 aa15.48■□□□□ 0.07
HLA-DOA-205ENST00000490305 AKR1B1P15121 316 aa15.48■□□□□ 0.07
HLA-DOA-205ENST00000490305 EPS15P42566 896 aa15.48■□□□□ 0.07
HLA-DOA-205ENST00000490305 NOVP48745 357 aa15.48■□□□□ 0.07
HLA-DOA-205ENST00000490305 RTN1Q16799 776 aa15.48■□□□□ 0.07
HLA-DOA-205ENST00000490305 HOOK2Q96ED9 719 aa15.48■□□□□ 0.07
HLA-DOA-205ENST00000490305 L3MBTL3Q96JM7 780 aaPredicted RBP15.48■□□□□ 0.07
HLA-DOA-205ENST00000490305 MAP3K14Q99558 947 aa15.48■□□□□ 0.07
HLA-DOA-205ENST00000490305 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.48■□□□□ 0.07
HLA-DOA-205ENST00000490305 IL17RBQ9NRM6 502 aa15.48■□□□□ 0.07
HLA-DOA-205ENST00000490305 RBM28Q9NW13 759 aaKnown RBP15.48■□□□□ 0.07
HLA-DOA-205ENST00000490305 GREB1LQ9C091 1923 aaPredicted RBP15.48■□□□□ 0.07
HLA-DOA-205ENST00000490305 IGKV6D-41A0A0C4DH26 115 aa15.47■□□□□ 0.07
HLA-DOA-205ENST00000490305 RASA3Q14644 834 aa15.47■□□□□ 0.07
HLA-DOA-205ENST00000490305 RCSD1Q6JBY9 416 aa15.47■□□□□ 0.07
HLA-DOA-205ENST00000490305 FAM184AQ8NB25 1140 aa15.47■□□□□ 0.07
HLA-DOA-205ENST00000490305 FANCBQ8NB91 859 aa15.47■□□□□ 0.07
HLA-DOA-205ENST00000490305 NSUN7Q8NE18 718 aaKnown RBP15.47■□□□□ 0.07
HLA-DOA-205ENST00000490305 NUP133Q8WUM0 1156 aa15.47■□□□□ 0.07
HLA-DOA-205ENST00000490305 TMEM39BQ9GZU3 492 aa15.47■□□□□ 0.07
HLA-DOA-205ENST00000490305 DNAJC18Q9H819 358 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms