RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 OSBPP22059 807 aa21.04■□□□□ 0.96
SEC13-218ENST00000490283 FCGRTP55899 365 aa21.04■□□□□ 0.96
SEC13-218ENST00000490283 BACE1P56817 501 aa21.04■□□□□ 0.96
SEC13-218ENST00000490283 MTMR2Q13614 643 aa21.04■□□□□ 0.96
SEC13-218ENST00000490283 CERKLQ49MI3 558 aaPredicted RBP21.04■□□□□ 0.96
SEC13-218ENST00000490283 SH3D19Q5HYK7 790 aa21.04■□□□□ 0.96
SEC13-218ENST00000490283 TREML2Q5T2D2 321 aa21.04■□□□□ 0.96
SEC13-218ENST00000490283 SDR42E1Q8WUS8 393 aa21.04■□□□□ 0.96
SEC13-218ENST00000490283 CABP5Q9NP86 173 aa21.04■□□□□ 0.96
SEC13-218ENST00000490283 PTCH2Q9Y6C5 1203 aa21.04■□□□□ 0.96
SEC13-218ENST00000490283 CDK5RAP2Q96SN8 1893 aa21.04■□□□□ 0.96
SEC13-218ENST00000490283 USP17L10C9JJH3 530 aa21.03■□□□□ 0.96
SEC13-218ENST00000490283 ERC2O15083 957 aa21.03■□□□□ 0.96
SEC13-218ENST00000490283 GH2P01242 217 aa21.03■□□□□ 0.96
SEC13-218ENST00000490283 BCRP11274 1271 aa21.03■□□□□ 0.96
SEC13-218ENST00000490283 CAP1Q01518 475 aa21.03■□□□□ 0.96
SEC13-218ENST00000490283 AAMPQ13685 434 aa21.03■□□□□ 0.96
SEC13-218ENST00000490283 LRRFIP1Q32MZ4 808 aaKnown RBP21.03■□□□□ 0.96
SEC13-218ENST00000490283 TATDN1Q6P1N9 297 aa21.03■□□□□ 0.96
SEC13-218ENST00000490283 ATP8A2Q9NTI2 1148 aa21.03■□□□□ 0.96
SEC13-218ENST00000490283 SIPA1L1O43166 1804 aa21.03■□□□□ 0.96
SEC13-218ENST00000490283 ABCB5Q2M3G0 1257 aa21.02■□□□□ 0.96
SEC13-218ENST00000490283 ARMC5Q96C12 935 aa21.02■□□□□ 0.96
SEC13-218ENST00000490283 FEZ1Q99689 392 aa21.02■□□□□ 0.96
SEC13-218ENST00000490283 DCP1AQ9NPI6 582 aaPredicted RBP21.02■□□□□ 0.96
SEC13-218ENST00000490283 TAOK2Q9UL54 1235 aa21.02■□□□□ 0.96
SEC13-218ENST00000490283 TTC41PQ6P2S7 1318 aa21.02■□□□□ 0.95
SEC13-218ENST00000490283 PHIPQ8WWQ0 1821 aa21.01■□□□□ 0.95
SEC13-218ENST00000490283 GCLCP48506 637 aaPredicted RBP21.01■□□□□ 0.95
SEC13-218ENST00000490283 PLCD1P51178 756 aa21.01■□□□□ 0.95
SEC13-218ENST00000490283 IRX3P78415 501 aaPredicted RBP21.01■□□□□ 0.95
SEC13-218ENST00000490283 RAB3GAP1Q15042 981 aa21.01■□□□□ 0.95
SEC13-218ENST00000490283 KBTBD3Q8NAB2 608 aa21.01■□□□□ 0.95
SEC13-218ENST00000490283 RAET1EQ8TD07 263 aa21.01■□□□□ 0.95
SEC13-218ENST00000490283 TRIM47Q96LD4 638 aa21.01■□□□□ 0.95
SEC13-218ENST00000490283 SRRDQ9UH36 339 aa21.01■□□□□ 0.95
SEC13-218ENST00000490283 MYH1P12882 1939 aa21.01■□□□□ 0.95
SEC13-218ENST00000490283 ATAD5Q96QE3 1844 aa21.01■□□□□ 0.95
SEC13-218ENST00000490283 JAG1P78504 1218 aa21■□□□□ 0.95
SEC13-218ENST00000490283 TSHZ3Q63HK5 1081 aa21■□□□□ 0.95
SEC13-218ENST00000490283 TMEM106CQ9BVX2 250 aa21■□□□□ 0.95
SEC13-218ENST00000490283 SWAP70Q9UH65 585 aa21■□□□□ 0.95
SEC13-218ENST00000490283 MYPNQ86TC9 1320 aa21■□□□□ 0.95
SEC13-218ENST00000490283 GLRX3O76003 335 aaKnown RBP20.99■□□□□ 0.95
SEC13-218ENST00000490283 ZFYP08048 801 aaPredicted RBP20.99■□□□□ 0.95
SEC13-218ENST00000490283 SHROOM1Q2M3G4 852 aaPredicted RBP20.99■□□□□ 0.95
SEC13-218ENST00000490283 SLFNL1Q499Z3 407 aa20.99■□□□□ 0.95
SEC13-218ENST00000490283 USP17L2Q6R6M4 530 aa20.99■□□□□ 0.95
SEC13-218ENST00000490283 ANKRD13CQ8N6S4 541 aa20.99■□□□□ 0.95
SEC13-218ENST00000490283 GCC1Q96CN9 775 aa20.99■□□□□ 0.95
SEC13-218ENST00000490283 ASCC2Q9H1I8 757 aaPredicted RBP20.99■□□□□ 0.95
SEC13-218ENST00000490283 SLC4A4Q9Y6R1 1079 aa20.99■□□□□ 0.95
SEC13-218ENST00000490283 PTPRFP10586 1907 aa20.99■□□□□ 0.95
SEC13-218ENST00000490283 MPHOSPH10O00566 681 aaKnown RBP20.98■□□□□ 0.95
SEC13-218ENST00000490283 TNPO2O14787 897 aaKnown RBP20.98■□□□□ 0.95
SEC13-218ENST00000490283 PRKAB2O43741 272 aa20.98■□□□□ 0.95
SEC13-218ENST00000490283 SHMT1P34896 483 aa20.98■□□□□ 0.95
SEC13-218ENST00000490283 USP14P54578 494 aa20.98■□□□□ 0.95
SEC13-218ENST00000490283 FAM110CQ1W6H9 321 aa20.98■□□□□ 0.95
SEC13-218ENST00000490283 ANKRD45Q5TZF3 282 aa20.98■□□□□ 0.95
SEC13-218ENST00000490283 NAV1Q8NEY1 1877 aa20.98■□□□□ 0.95
SEC13-218ENST00000490283 MX1P20591 662 aa20.97■□□□□ 0.95
SEC13-218ENST00000490283 GABPAQ06546 454 aa20.97■□□□□ 0.95
SEC13-218ENST00000490283 HDAC1Q13547 482 aaPredicted RBP20.97■□□□□ 0.95
SEC13-218ENST00000490283 APPBP2Q92624 585 aa20.97■□□□□ 0.95
SEC13-218ENST00000490283 ZNF333Q96JL9 665 aa20.97■□□□□ 0.95
SEC13-218ENST00000490283 PUS7LQ9H0K6 701 aaKnown RBP20.97■□□□□ 0.95
SEC13-218ENST00000490283 LOC285556D6RIA3 1793 aa20.97■□□□□ 0.95
SEC13-218ENST00000490283 RNF113AO15541 343 aaKnown RBP20.96■□□□□ 0.95
SEC13-218ENST00000490283 CTGFP29279 349 aa20.96■□□□□ 0.95
SEC13-218ENST00000490283 HOXA7P31268 230 aaPredicted RBP20.96■□□□□ 0.95
SEC13-218ENST00000490283 ZYXQ15942 572 aaKnown RBP20.96■□□□□ 0.95
SEC13-218ENST00000490283 GTF3C2Q8WUA4 911 aaPredicted RBP20.96■□□□□ 0.95
SEC13-218ENST00000490283 COA7Q96BR5 231 aa20.96■□□□□ 0.95
SEC13-218ENST00000490283 DDX60LQ5H9U9 1706 aaKnown RBP20.95■□□□□ 0.94
SEC13-218ENST00000490283 CHGBP05060 677 aa20.95■□□□□ 0.94
SEC13-218ENST00000490283 CYP2D6P10635 497 aa20.95■□□□□ 0.94
SEC13-218ENST00000490283 PRKCZQ05513 592 aa20.95■□□□□ 0.94
SEC13-218ENST00000490283 SH3TC2Q8TF17 1288 aa20.95■□□□□ 0.94
SEC13-218ENST00000490283 ARPP21Q9UBL0 812 aaPredicted RBP20.95■□□□□ 0.94
SEC13-218ENST00000490283 BIN2Q9UBW5 565 aaPredicted RBP20.95■□□□□ 0.94
SEC13-218ENST00000490283 USP17L12C9JPN9 530 aa20.94■□□□□ 0.94
SEC13-218ENST00000490283 USP17L21D6R901 530 aa20.94■□□□□ 0.94
SEC13-218ENST00000490283 GRK4P32298 578 aa20.94■□□□□ 0.94
SEC13-218ENST00000490283 TMEM179Q6ZVK1 233 aa20.94■□□□□ 0.94
SEC13-218ENST00000490283 C12orf42Q96LP6 360 aa20.94■□□□□ 0.94
SEC13-218ENST00000490283 FSD1Q9BTV5 496 aa20.94■□□□□ 0.94
SEC13-218ENST00000490283 KIAA1683Q9H0B3 1180 aa20.94■□□□□ 0.94
SEC13-218ENST00000490283 RWDD1Q9H446 243 aaPredicted RBP20.94■□□□□ 0.94
SEC13-218ENST00000490283 EMILIN3Q9NT22 766 aa20.94■□□□□ 0.94
SEC13-218ENST00000490283 GNAT2P19087 354 aa20.93■□□□□ 0.94
SEC13-218ENST00000490283 HERVK_113P62684 666 aa20.93■□□□□ 0.94
SEC13-218ENST00000490283 SEPT2Q15019 361 aa20.93■□□□□ 0.94
SEC13-218ENST00000490283 C12orf60Q5U649 245 aa20.93■□□□□ 0.94
SEC13-218ENST00000490283 SLAIN1Q8ND83 568 aa20.93■□□□□ 0.94
SEC13-218ENST00000490283 PI4K2BQ8TCG2 481 aa20.93■□□□□ 0.94
SEC13-218ENST00000490283 OTUD7AQ8TE49 926 aaPredicted RBP20.93■□□□□ 0.94
SEC13-218ENST00000490283 DYNLL2Q96FJ2 89 aa20.93■□□□□ 0.94
SEC13-218ENST00000490283 CCDC17Q96LX7 622 aa20.93■□□□□ 0.94
SEC13-218ENST00000490283 STRBPQ96SI9 672 aaKnown RBP20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms