RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 JAG1P78504 1218 aa23.85■■□□□ 1.41
SMC4-222ENST00000490207 UBE3CQ15386 1083 aa23.85■■□□□ 1.41
SMC4-222ENST00000490207 TREML2Q5T2D2 321 aa23.85■■□□□ 1.41
SMC4-222ENST00000490207 MCM9Q9NXL9 1143 aa23.85■■□□□ 1.41
SMC4-222ENST00000490207 CHGBP05060 677 aa23.84■■□□□ 1.41
SMC4-222ENST00000490207 BCRP11274 1271 aa23.84■■□□□ 1.41
SMC4-222ENST00000490207 TATDN1Q6P1N9 297 aa23.84■■□□□ 1.41
SMC4-222ENST00000490207 WDR18Q9BV38 432 aa23.84■■□□□ 1.41
SMC4-222ENST00000490207 DCP1AQ9NPI6 582 aaPredicted RBP23.84■■□□□ 1.41
SMC4-222ENST00000490207 PNMA3Q9UL41 463 aa23.84■■□□□ 1.41
SMC4-222ENST00000490207 TTC41PQ6P2S7 1318 aa23.84■■□□□ 1.41
SMC4-222ENST00000490207 RBBP6Q7Z6E9 1792 aaKnown RBP23.83■■□□□ 1.41
SMC4-222ENST00000490207 ECM2O94769 699 aaPredicted RBP23.83■■□□□ 1.41
SMC4-222ENST00000490207 PLCD1P51178 756 aa23.83■■□□□ 1.41
SMC4-222ENST00000490207 MTMR2Q13614 643 aa23.83■■□□□ 1.41
SMC4-222ENST00000490207 SH3D19Q5HYK7 790 aa23.83■■□□□ 1.41
SMC4-222ENST00000490207 SMCR8Q8TEV9 937 aaPredicted RBP23.83■■□□□ 1.41
SMC4-222ENST00000490207 GNRH1P01148 92 aa23.82■■□□□ 1.4
SMC4-222ENST00000490207 KBTBD3Q8NAB2 608 aa23.82■■□□□ 1.4
SMC4-222ENST00000490207 PTCH2Q9Y6C5 1203 aa23.82■■□□□ 1.4
SMC4-222ENST00000490207 GH2P01242 217 aa23.81■■□□□ 1.4
SMC4-222ENST00000490207 PSMC4P43686 418 aa23.81■■□□□ 1.4
SMC4-222ENST00000490207 BACE1P56817 501 aa23.81■■□□□ 1.4
SMC4-222ENST00000490207 MLLT1Q03111 559 aaPredicted RBP23.81■■□□□ 1.4
SMC4-222ENST00000490207 PABPC4Q13310 644 aaKnown RBP eCLIP23.81■■□□□ 1.4
SMC4-222ENST00000490207 CERKLQ49MI3 558 aaPredicted RBP23.81■■□□□ 1.4
SMC4-222ENST00000490207 ERC2O15083 957 aa23.8■■□□□ 1.4
SMC4-222ENST00000490207 PRKAB2O43741 272 aa23.8■■□□□ 1.4
SMC4-222ENST00000490207 CTGFP29279 349 aa23.8■■□□□ 1.4
SMC4-222ENST00000490207 SHMT1P34896 483 aa23.8■■□□□ 1.4
SMC4-222ENST00000490207 GABPAQ06546 454 aa23.8■■□□□ 1.4
SMC4-222ENST00000490207 HDAC1Q13547 482 aaPredicted RBP23.8■■□□□ 1.4
SMC4-222ENST00000490207 AAMPQ13685 434 aa23.8■■□□□ 1.4
SMC4-222ENST00000490207 OTUD7AQ8TE49 926 aaPredicted RBP23.8■■□□□ 1.4
SMC4-222ENST00000490207 ATP8A2Q9NTI2 1148 aa23.8■■□□□ 1.4
SMC4-222ENST00000490207 TMOD4Q9NZQ9 345 aa23.8■■□□□ 1.4
SMC4-222ENST00000490207 ZBTB47Q9UFB7 747 aaPredicted RBP23.8■■□□□ 1.4
SMC4-222ENST00000490207 USP17L10C9JJH3 530 aa23.79■■□□□ 1.4
SMC4-222ENST00000490207 CYP2D6P10635 497 aa23.79■■□□□ 1.4
SMC4-222ENST00000490207 PRMT2P55345 433 aa23.79■■□□□ 1.4
SMC4-222ENST00000490207 EVX2Q03828 476 aa23.79■■□□□ 1.4
SMC4-222ENST00000490207 ABCB5Q2M3G0 1257 aa23.79■■□□□ 1.4
SMC4-222ENST00000490207 ARMC5Q96C12 935 aa23.79■■□□□ 1.4
SMC4-222ENST00000490207 GCC1Q96CN9 775 aa23.79■■□□□ 1.4
SMC4-222ENST00000490207 TRIM47Q96LD4 638 aa23.79■■□□□ 1.4
SMC4-222ENST00000490207 PUS7LQ9H0K6 701 aaKnown RBP23.79■■□□□ 1.4
SMC4-222ENST00000490207 C19orf81C9J6K1 198 aa23.78■■□□□ 1.4
SMC4-222ENST00000490207 FMNL1O95466 1100 aaPredicted RBP23.78■■□□□ 1.4
SMC4-222ENST00000490207 MX1P20591 662 aa23.78■■□□□ 1.4
SMC4-222ENST00000490207 OSBPP22059 807 aa23.78■■□□□ 1.4
SMC4-222ENST00000490207 SLC9C1Q4G0N8 1177 aa23.78■■□□□ 1.4
SMC4-222ENST00000490207 PI4K2BQ8TCG2 481 aa23.78■■□□□ 1.4
SMC4-222ENST00000490207 CABP5Q9NP86 173 aa23.78■■□□□ 1.4
SMC4-222ENST00000490207 SLC4A4Q9Y6R1 1079 aa23.78■■□□□ 1.4
SMC4-222ENST00000490207 GLRX3O76003 335 aaKnown RBP23.77■■□□□ 1.4
SMC4-222ENST00000490207 FCGRTP55899 365 aa23.77■■□□□ 1.4
SMC4-222ENST00000490207 RAB3GAP1Q15042 981 aa23.77■■□□□ 1.4
SMC4-222ENST00000490207 ANKRD45Q5TZF3 282 aa23.77■■□□□ 1.4
SMC4-222ENST00000490207 AMOTL1Q8IY63 956 aa23.77■■□□□ 1.4
SMC4-222ENST00000490207 DDRGK1Q96HY6 314 aa23.77■■□□□ 1.4
SMC4-222ENST00000490207 SRRDQ9UH36 339 aa23.77■■□□□ 1.4
SMC4-222ENST00000490207 HOXD10P28358 340 aa23.76■■□□□ 1.39
SMC4-222ENST00000490207 ANKRD13CQ8N6S4 541 aa23.76■■□□□ 1.39
SMC4-222ENST00000490207 APPBP2Q92624 585 aa23.76■■□□□ 1.39
SMC4-222ENST00000490207 FEZ1Q99689 392 aa23.76■■□□□ 1.39
SMC4-222ENST00000490207 ASCC2Q9H1I8 757 aaPredicted RBP23.76■■□□□ 1.39
SMC4-222ENST00000490207 SWAP70Q9UH65 585 aa23.76■■□□□ 1.39
SMC4-222ENST00000490207 MYPNQ86TC9 1320 aa23.76■■□□□ 1.39
SMC4-222ENST00000490207 SALL3Q9BXA9 1300 aa23.76■■□□□ 1.39
SMC4-222ENST00000490207 RNF113AO15541 343 aaKnown RBP23.75■■□□□ 1.39
SMC4-222ENST00000490207 ZFYP08048 801 aaPredicted RBP23.75■■□□□ 1.39
SMC4-222ENST00000490207 IRX3P78415 501 aaPredicted RBP23.75■■□□□ 1.39
SMC4-222ENST00000490207 FAM110CQ1W6H9 321 aa23.75■■□□□ 1.39
SMC4-222ENST00000490207 USP17L2Q6R6M4 530 aa23.75■■□□□ 1.39
SMC4-222ENST00000490207 SLC44A5Q8NCS7 719 aa23.75■■□□□ 1.39
SMC4-222ENST00000490207 TAOK2Q9UL54 1235 aa23.75■■□□□ 1.39
SMC4-222ENST00000490207 CENPFP49454 3210 aa23.75■■□□□ 1.39
SMC4-222ENST00000490207 GCLCP48506 637 aaPredicted RBP23.74■■□□□ 1.39
SMC4-222ENST00000490207 LRRFIP1Q32MZ4 808 aaKnown RBP23.74■■□□□ 1.39
SMC4-222ENST00000490207 NBPF11Q86T75 865 aa23.74■■□□□ 1.39
SMC4-222ENST00000490207 DYNLL2Q96FJ2 89 aa23.74■■□□□ 1.39
SMC4-222ENST00000490207 ZNF333Q96JL9 665 aa23.74■■□□□ 1.39
SMC4-222ENST00000490207 CYP2D7A0A087X1C5 515 aa23.73■■□□□ 1.39
SMC4-222ENST00000490207 MPHOSPH10O00566 681 aaKnown RBP23.73■■□□□ 1.39
SMC4-222ENST00000490207 HOXA7P31268 230 aaPredicted RBP23.73■■□□□ 1.39
SMC4-222ENST00000490207 ZYXQ15942 572 aaKnown RBP23.73■■□□□ 1.39
SMC4-222ENST00000490207 C12orf60Q5U649 245 aa23.73■■□□□ 1.39
SMC4-222ENST00000490207 EXOC6Q8TAG9 804 aa23.73■■□□□ 1.39
SMC4-222ENST00000490207 OSBP2Q969R2 916 aa23.73■■□□□ 1.39
SMC4-222ENST00000490207 EMILIN3Q9NT22 766 aa23.73■■□□□ 1.39
SMC4-222ENST00000490207 USP17L12C9JPN9 530 aa23.72■■□□□ 1.39
SMC4-222ENST00000490207 USP17L21D6R901 530 aa23.72■■□□□ 1.39
SMC4-222ENST00000490207 GUCY1A2P33402 732 aa23.72■■□□□ 1.39
SMC4-222ENST00000490207 USP14P54578 494 aa23.72■■□□□ 1.39
SMC4-222ENST00000490207 PRKCZQ05513 592 aa23.72■■□□□ 1.39
SMC4-222ENST00000490207 SEPT2Q15019 361 aa23.72■■□□□ 1.39
SMC4-222ENST00000490207 RAET1EQ8TD07 263 aa23.72■■□□□ 1.39
SMC4-222ENST00000490207 SH3TC2Q8TF17 1288 aa23.72■■□□□ 1.39
SMC4-222ENST00000490207 C12orf42Q96LP6 360 aa23.72■■□□□ 1.39
SMC4-222ENST00000490207 STRBPQ96SI9 672 aaKnown RBP23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms