RNA–Protein interactions for RNA: ENST00000489935.1

KCNC4-207, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 1,955 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-207ENST00000489935 SAFBQ15424 915 aaKnown RBP eCLIP30.59■■■□□ 2.49
KCNC4-207ENST00000489935 STX1AQ16623 288 aa30.59■■■□□ 2.49
KCNC4-207ENST00000489935 SHISA4Q96DD7 197 aa30.59■■■□□ 2.49
KCNC4-207ENST00000489935 SDF4Q9BRK5 362 aa30.59■■■□□ 2.49
KCNC4-207ENST00000489935 PLEKHA8P1O95397 391 aa30.59■■■□□ 2.49
KCNC4-207ENST00000489935 CAVIN2O95810 425 aa30.59■■■□□ 2.49
KCNC4-207ENST00000489935 PFKFB1P16118 471 aa30.59■■■□□ 2.49
KCNC4-207ENST00000489935 TOB1P50616 345 aaPredicted RBP30.59■■■□□ 2.49
KCNC4-207ENST00000489935 GSTO1P78417 241 aa30.59■■■□□ 2.49
KCNC4-207ENST00000489935 PKN1Q16512 942 aa30.59■■■□□ 2.49
KCNC4-207ENST00000489935 FOXP1Q9H334 677 aaPredicted RBP30.59■■■□□ 2.49
KCNC4-207ENST00000489935 POLLQ9UGP5 575 aa30.59■■■□□ 2.49
KCNC4-207ENST00000489935 KLRG2A4D1S0 409 aaPredicted RBP30.58■■■□□ 2.49
KCNC4-207ENST00000489935 ZNF202O95125 648 aa30.58■■■□□ 2.49
KCNC4-207ENST00000489935 IL1R1P14778 569 aa30.58■■■□□ 2.49
KCNC4-207ENST00000489935 USP5P45974 858 aa30.58■■■□□ 2.49
KCNC4-207ENST00000489935 PDE4BQ07343 736 aa30.58■■■□□ 2.49
KCNC4-207ENST00000489935 IQCB1Q15051 598 aa30.58■■■□□ 2.49
KCNC4-207ENST00000489935 C12orf60Q5U649 245 aa30.58■■■□□ 2.49
KCNC4-207ENST00000489935 CRAMP1Q96RY5 1269 aa30.58■■■□□ 2.49
KCNC4-207ENST00000489935 PPP4CP60510 307 aa30.57■■■□□ 2.48
KCNC4-207ENST00000489935 ZNF830Q96NB3 372 aaPredicted RBP30.57■■■□□ 2.48
KCNC4-207ENST00000489935 PODXL2Q9NZ53 605 aa30.57■■■□□ 2.48
KCNC4-207ENST00000489935 EIF4ENIF1Q9NRA8 985 aaKnown RBP30.57■■■□□ 2.48
KCNC4-207ENST00000489935 RBM28Q9NW13 759 aaKnown RBP30.57■■■□□ 2.48
KCNC4-207ENST00000489935 PRPF3O43395 683 aaKnown RBP30.56■■■□□ 2.48
KCNC4-207ENST00000489935 DDAH1O94760 285 aa30.56■■■□□ 2.48
KCNC4-207ENST00000489935 CALM1P0DP23 149 aa30.56■■■□□ 2.48
KCNC4-207ENST00000489935 CALM2P0DP24 149 aa30.56■■■□□ 2.48
KCNC4-207ENST00000489935 CALM3P0DP25 149 aa30.56■■■□□ 2.48
KCNC4-207ENST00000489935 NR5A1Q13285 461 aa30.56■■■□□ 2.48
KCNC4-207ENST00000489935 SHC4Q6S5L8 630 aa30.56■■■□□ 2.48
KCNC4-207ENST00000489935 TBC1D16Q8TBP0 767 aa30.56■■■□□ 2.48
KCNC4-207ENST00000489935 OXER1Q8TDS5 423 aa30.56■■■□□ 2.48
KCNC4-207ENST00000489935 hCG_1642624A0A1W2PR95 340 aa30.55■■■□□ 2.48
KCNC4-207ENST00000489935 JMYQ8N9B5 988 aa30.55■■■□□ 2.48
KCNC4-207ENST00000489935 V9GY48 417 aaPredicted RBP30.55■■■□□ 2.48
KCNC4-207ENST00000489935 BAG3O95817 575 aa30.55■■■□□ 2.48
KCNC4-207ENST00000489935 CLIC6Q96NY7 704 aa30.55■■■□□ 2.48
KCNC4-207ENST00000489935 AKAP17AQ02040 695 aaKnown RBP30.54■■■□□ 2.48
KCNC4-207ENST00000489935 DYNLL2Q96FJ2 89 aa30.54■■■□□ 2.48
KCNC4-207ENST00000489935 RTFDC1Q9BY42 306 aaPredicted RBP30.54■■■□□ 2.48
KCNC4-207ENST00000489935 KIAA1468Q9P260 1216 aa30.54■■■□□ 2.48
KCNC4-207ENST00000489935 HPSEQ9Y251 543 aa30.54■■■□□ 2.48
KCNC4-207ENST00000489935 TSPY2A6NKD2 308 aa30.54■■■□□ 2.48
KCNC4-207ENST00000489935 LDHCP07864 332 aa30.54■■■□□ 2.48
KCNC4-207ENST00000489935 ZNF827Q17R98 1081 aa30.54■■■□□ 2.48
KCNC4-207ENST00000489935 RCSD1Q6JBY9 416 aa30.54■■■□□ 2.48
KCNC4-207ENST00000489935 TMTC3Q6ZXV5 915 aa30.54■■■□□ 2.48
KCNC4-207ENST00000489935 ANO10Q9NW15 660 aa30.54■■■□□ 2.48
KCNC4-207ENST00000489935 ANKRD31Q8N7Z5 1873 aa30.53■■■□□ 2.48
KCNC4-207ENST00000489935 CDK5RAP2Q96SN8 1893 aa30.53■■■□□ 2.48
KCNC4-207ENST00000489935 TGFBRAP1Q8WUH2 860 aa30.53■■■□□ 2.48
KCNC4-207ENST00000489935 VPS54Q9P1Q0 977 aa30.53■■■□□ 2.48
KCNC4-207ENST00000489935 TTC12Q9H892 705 aaPredicted RBP30.52■■■□□ 2.48
KCNC4-207ENST00000489935 FAM237AA0A1B0GTK4 181 aa30.52■■■□□ 2.48
KCNC4-207ENST00000489935 RESP18Q5W5W9 173 aa30.52■■■□□ 2.48
KCNC4-207ENST00000489935 SPC24Q8NBT2 197 aa30.52■■■□□ 2.48
KCNC4-207ENST00000489935 LTBP1Q14766 1721 aa30.51■■■□□ 2.48
KCNC4-207ENST00000489935 NAV1Q8NEY1 1877 aa30.51■■■□□ 2.48
KCNC4-207ENST00000489935 CUTAO60888 179 aa30.51■■■□□ 2.47
KCNC4-207ENST00000489935 TFAP4Q01664 338 aa30.51■■■□□ 2.47
KCNC4-207ENST00000489935 RILPL1Q5EBL4 403 aa30.51■■■□□ 2.47
KCNC4-207ENST00000489935 SRBD1Q8N5C6 995 aaKnown RBP30.51■■■□□ 2.47
KCNC4-207ENST00000489935 NOL10Q9BSC4 688 aaKnown RBP30.51■■■□□ 2.47
KCNC4-207ENST00000489935 IL17RBQ9NRM6 502 aa30.51■■■□□ 2.47
KCNC4-207ENST00000489935 BAZ2BQ9UIF8 2168 aaKnown RBP30.51■■■□□ 2.47
KCNC4-207ENST00000489935 SYKP43405 635 aa30.5■■■□□ 2.47
KCNC4-207ENST00000489935 COL23A1Q86Y22 540 aaPredicted RBP30.5■■■□□ 2.47
KCNC4-207ENST00000489935 PHF20Q9BVI0 1012 aa30.5■■■□□ 2.47
KCNC4-207ENST00000489935 LRRC37AA6NMS7 1700 aa30.5■■■□□ 2.47
KCNC4-207ENST00000489935 C6orf229H3BNL8 230 aa30.5■■■□□ 2.47
KCNC4-207ENST00000489935 BTDP43251 543 aa30.5■■■□□ 2.47
KCNC4-207ENST00000489935 PLA2G4DQ86XP0 818 aa30.5■■■□□ 2.47
KCNC4-207ENST00000489935 ROBO3Q96MS0 1386 aa30.49■■■□□ 2.47
KCNC4-207ENST00000489935 MAPKAPK5Q8IW41 473 aa30.49■■■□□ 2.47
KCNC4-207ENST00000489935 DHX40Q8IX18 779 aaKnown RBP30.49■■■□□ 2.47
KCNC4-207ENST00000489935 SP8Q8IXZ3 490 aa30.49■■■□□ 2.47
KCNC4-207ENST00000489935 FBXW7Q969H0 707 aa30.49■■■□□ 2.47
KCNC4-207ENST00000489935 TIGD1Q96MW7 591 aa30.49■■■□□ 2.47
KCNC4-207ENST00000489935 PCDHB6Q9Y5E3 794 aa30.49■■■□□ 2.47
KCNC4-207ENST00000489935 CNTNAP5Q8WYK1 1306 aa30.49■■■□□ 2.47
KCNC4-207ENST00000489935 GPR75-ASB3A0A0A6YYF3 556 aa30.48■■■□□ 2.47
KCNC4-207ENST00000489935 PPEF1O14829 653 aaPredicted RBP30.48■■■□□ 2.47
KCNC4-207ENST00000489935 PLCD1P51178 756 aa30.48■■■□□ 2.47
KCNC4-207ENST00000489935 ZNF75DP51815 510 aa30.48■■■□□ 2.47
KCNC4-207ENST00000489935 CTCFLQ8NI51 663 aaPredicted RBP30.48■■■□□ 2.47
KCNC4-207ENST00000489935 AKT1S1Q96B36 256 aa30.48■■■□□ 2.47
KCNC4-207ENST00000489935 CABP5Q9NP86 173 aa30.48■■■□□ 2.47
KCNC4-207ENST00000489935 XBP1P17861 261 aa30.48■■■□□ 2.47
KCNC4-207ENST00000489935 MFSD14BQ5SR56 506 aa30.48■■■□□ 2.47
KCNC4-207ENST00000489935 KRI1Q8N9T8 703 aaKnown RBP30.48■■■□□ 2.47
KCNC4-207ENST00000489935 TRIM5Q9C035 493 aa30.48■■■□□ 2.47
KCNC4-207ENST00000489935 OFD1O75665 1012 aa30.47■■■□□ 2.47
KCNC4-207ENST00000489935 SAP30BPQ9UHR5 308 aaKnown RBP30.47■■■□□ 2.47
KCNC4-207ENST00000489935 GOLGA6L19H0YKK7 550 aa30.46■■■□□ 2.47
KCNC4-207ENST00000489935 MKNK2Q9HBH9 465 aa30.46■■■□□ 2.47
KCNC4-207ENST00000489935 FAM205CA6NFA0 338 aa30.46■■■□□ 2.47
KCNC4-207ENST00000489935 GRIN1Q05586 938 aa30.46■■■□□ 2.47
KCNC4-207ENST00000489935 EARS2Q5JPH6 523 aaKnown RBP30.46■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms