RNA–Protein interactions for RNA: ENST00000489826.1

UBA7-209, Transcript of ubiquitin like modifier activating enzyme 7, human

TSL 2

Gene UBA7, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA7-209	ENST00000489826	TNFRSF10A	O00220	468 aa		13.6	□□□□□ -0.23
UBA7-209	ENST00000489826	ATN1	P54259	1190 aa	Predicted RBP	13.6	□□□□□ -0.23
UBA7-209	ENST00000489826	C9orf50	Q5SZB4	431 aa		13.6	□□□□□ -0.23
UBA7-209	ENST00000489826	TRMT44	Q8IYL2	757 aa	Known RBP	13.6	□□□□□ -0.23
UBA7-209	ENST00000489826	LPIN2	Q92539	896 aa		13.6	□□□□□ -0.23
UBA7-209	ENST00000489826	SALL1	Q9NSC2	1324 aa		13.6	□□□□□ -0.23
UBA7-209	ENST00000489826	IRX3	P78415	501 aa	Predicted RBP	13.59	□□□□□ -0.23
UBA7-209	ENST00000489826	USP6NL	Q92738	828 aa		13.59	□□□□□ -0.23
UBA7-209	ENST00000489826	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.59	□□□□□ -0.23
UBA7-209	ENST00000489826	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
UBA7-209	ENST00000489826	TXNRD2	Q9NNW7	524 aa		13.59	□□□□□ -0.23
UBA7-209	ENST00000489826	PRKAG2	Q9UGJ0	569 aa		13.59	□□□□□ -0.23
UBA7-209	ENST00000489826	SIPA1L1	O43166	1804 aa		13.59	□□□□□ -0.23
UBA7-209	ENST00000489826	TBC1D12	O60347	775 aa		13.58	□□□□□ -0.24
UBA7-209	ENST00000489826	RTP1	P59025	263 aa		13.58	□□□□□ -0.24
UBA7-209	ENST00000489826	SMAD3	P84022	425 aa	Known RBP	13.58	□□□□□ -0.24
UBA7-209	ENST00000489826	SH3D19	Q5HYK7	790 aa		13.58	□□□□□ -0.24
UBA7-209	ENST00000489826	TJAP1	Q5JTD0	557 aa		13.58	□□□□□ -0.24
UBA7-209	ENST00000489826	P2RX7	Q99572	595 aa	Known RBP	13.58	□□□□□ -0.24
UBA7-209	ENST00000489826	TBC1D2	Q9BYX2	928 aa		13.58	□□□□□ -0.24
UBA7-209	ENST00000489826	RWDD1	Q9H446	243 aa	Predicted RBP	13.58	□□□□□ -0.24
UBA7-209	ENST00000489826	EYA2	O00167	538 aa		13.57	□□□□□ -0.24
UBA7-209	ENST00000489826	PLA2G5	P39877	138 aa		13.57	□□□□□ -0.24
UBA7-209	ENST00000489826	RGS2	P41220	211 aa		13.57	□□□□□ -0.24
UBA7-209	ENST00000489826	BTD	P43251	543 aa		13.57	□□□□□ -0.24
UBA7-209	ENST00000489826	RRP1B	Q14684	758 aa	Known RBP	13.57	□□□□□ -0.24
UBA7-209	ENST00000489826	MORN1	Q5T089	497 aa		13.57	□□□□□ -0.24
UBA7-209	ENST00000489826	USP38	Q8NB14	1042 aa		13.57	□□□□□ -0.24
UBA7-209	ENST00000489826	GPRC5A	Q8NFJ5	357 aa		13.57	□□□□□ -0.24
UBA7-209	ENST00000489826	APBA2	Q99767	749 aa		13.57	□□□□□ -0.24
UBA7-209	ENST00000489826	PORCN	Q9H237	461 aa		13.57	□□□□□ -0.24
UBA7-209	ENST00000489826	ZBTB40	Q9NUA8	1239 aa		13.57	□□□□□ -0.24
UBA7-209	ENST00000489826	GNL3L	Q9NVN8	582 aa	Known RBP	13.57	□□□□□ -0.24
UBA7-209	ENST00000489826	DENND2A	Q9ULE3	1009 aa		13.57	□□□□□ -0.24
UBA7-209	ENST00000489826	CDK5RAP2	Q96SN8	1893 aa		13.57	□□□□□ -0.24
UBA7-209	ENST00000489826	USP17L5	A8MUK1	530 aa		13.56	□□□□□ -0.24
UBA7-209	ENST00000489826	MAPK4	P31152	587 aa		13.56	□□□□□ -0.24
UBA7-209	ENST00000489826	CAP2	P40123	477 aa		13.56	□□□□□ -0.24
UBA7-209	ENST00000489826	PHKA1	P46020	1223 aa		13.56	□□□□□ -0.24
UBA7-209	ENST00000489826	HERVK_113	P62684	666 aa		13.56	□□□□□ -0.24
UBA7-209	ENST00000489826	GPR142	Q7Z601	462 aa		13.56	□□□□□ -0.24
UBA7-209	ENST00000489826	DZIP1	Q86YF9	867 aa	Known RBP	13.56	□□□□□ -0.24
UBA7-209	ENST00000489826	ATP11B	Q9Y2G3	1177 aa		13.56	□□□□□ -0.24
UBA7-209	ENST00000489826	TCF20	Q9UGU0	1960 aa	Known RBP	13.56	□□□□□ -0.24
UBA7-209	ENST00000489826	SMCHD1	A6NHR9	2005 aa		13.56	□□□□□ -0.24
UBA7-209	ENST00000489826	HOXA7	P31268	230 aa	Predicted RBP	13.55	□□□□□ -0.24
UBA7-209	ENST00000489826	RFX5	P48382	616 aa	Predicted RBP	13.55	□□□□□ -0.24
UBA7-209	ENST00000489826	ERVK-9	P63128	1117 aa		13.55	□□□□□ -0.24
UBA7-209	ENST00000489826	ERVK-24	P63145	666 aa		13.55	□□□□□ -0.24
UBA7-209	ENST00000489826	MTMR2	Q13614	643 aa		13.55	□□□□□ -0.24
UBA7-209	ENST00000489826	ATP2B3	Q16720	1220 aa		13.55	□□□□□ -0.24
UBA7-209	ENST00000489826		Q3C1V9	767 aa		13.55	□□□□□ -0.24
UBA7-209	ENST00000489826	ATG9A	Q7Z3C6	839 aa		13.55	□□□□□ -0.24
UBA7-209	ENST00000489826	PLEKHH3	Q7Z736	793 aa		13.55	□□□□□ -0.24
UBA7-209	ENST00000489826	CCAR1	Q8IX12	1150 aa	Known RBP	13.55	□□□□□ -0.24
UBA7-209	ENST00000489826	ZGPAT	Q8N5A5	531 aa	Known RBP	13.55	□□□□□ -0.24
UBA7-209	ENST00000489826	BAD	Q92934	168 aa		13.55	□□□□□ -0.24
UBA7-209	ENST00000489826	RBPJL	Q9UBG7	517 aa		13.55	□□□□□ -0.24
UBA7-209	ENST00000489826	TMEM265	A0A087WTH1	108 aa		13.54	□□□□□ -0.24
UBA7-209	ENST00000489826	SEMA3E	O15041	775 aa		13.54	□□□□□ -0.24
UBA7-209	ENST00000489826	RHBDL3	P58872	404 aa		13.54	□□□□□ -0.24
UBA7-209	ENST00000489826	HDAC1	Q13547	482 aa	Predicted RBP	13.54	□□□□□ -0.24
UBA7-209	ENST00000489826	SLF2	Q8IX21	1173 aa		13.54	□□□□□ -0.24
UBA7-209	ENST00000489826	FAM122A	Q96E09	287 aa		13.54	□□□□□ -0.24
UBA7-209	ENST00000489826	FAM163A	Q96GL9	167 aa	Predicted RBP	13.54	□□□□□ -0.24
UBA7-209	ENST00000489826	PAGR1	Q9BTK6	254 aa		13.54	□□□□□ -0.24
UBA7-209	ENST00000489826	AS3MT	Q9HBK9	375 aa		13.54	□□□□□ -0.24
UBA7-209	ENST00000489826	PRDM5	Q9NQX1	630 aa	Predicted RBP	13.54	□□□□□ -0.24
UBA7-209	ENST00000489826	TMOD4	Q9NZQ9	345 aa		13.54	□□□□□ -0.24
UBA7-209	ENST00000489826	FLRT1	Q9NZU1	646 aa		13.54	□□□□□ -0.24
UBA7-209	ENST00000489826	DDX20	Q9UHI6	824 aa	Known RBP	13.54	□□□□□ -0.24
UBA7-209	ENST00000489826	PCDHB15	Q9Y5E8	787 aa		13.54	□□□□□ -0.24
UBA7-209	ENST00000489826	CHD9	Q3L8U1	2897 aa		13.54	□□□□□ -0.24
UBA7-209	ENST00000489826	MROH7-TTC4	A0A0A0MT08	1334 aa		13.54	□□□□□ -0.24
UBA7-209	ENST00000489826	REV3L	O60673	3130 aa		13.53	□□□□□ -0.24
UBA7-209	ENST00000489826	PLXNA1	Q9UIW2	1896 aa		13.53	□□□□□ -0.24
UBA7-209	ENST00000489826	DNM1L	O00429	736 aa		13.53	□□□□□ -0.24
UBA7-209	ENST00000489826	BACE1	P56817	501 aa		13.53	□□□□□ -0.24
UBA7-209	ENST00000489826	MAP2K5	Q13163	448 aa		13.53	□□□□□ -0.24
UBA7-209	ENST00000489826	MFSD14C	Q5VZR4	134 aa		13.53	□□□□□ -0.24
UBA7-209	ENST00000489826	LPAR1	Q92633	364 aa		13.53	□□□□□ -0.24
UBA7-209	ENST00000489826	WDR18	Q9BV38	432 aa		13.53	□□□□□ -0.24
UBA7-209	ENST00000489826	ABCF2	Q9UG63	623 aa		13.53	□□□□□ -0.24
UBA7-209	ENST00000489826	FOCAD	Q5VW36	1801 aa		13.53	□□□□□ -0.24
UBA7-209	ENST00000489826	NPM3	O75607	178 aa	Known RBP	13.52	□□□□□ -0.25
UBA7-209	ENST00000489826	CNGA1	P29973	690 aa		13.52	□□□□□ -0.25
UBA7-209	ENST00000489826	ADORA1	P30542	326 aa		13.52	□□□□□ -0.25
UBA7-209	ENST00000489826	POTEE	Q6S8J3	1075 aa		13.52	□□□□□ -0.25
UBA7-209	ENST00000489826	SIL1	Q9H173	461 aa		13.52	□□□□□ -0.25
UBA7-209	ENST00000489826	CWC22	Q9HCG8	908 aa	Known RBP	13.52	□□□□□ -0.25
UBA7-209	ENST00000489826	PDLIM7	Q9NR12	457 aa		13.52	□□□□□ -0.25
UBA7-209	ENST00000489826	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.51	□□□□□ -0.25
UBA7-209	ENST00000489826	GPR75-ASB3	A0A0A6YYF3	556 aa		13.51	□□□□□ -0.25
UBA7-209	ENST00000489826	MSC	O60682	206 aa		13.51	□□□□□ -0.25
UBA7-209	ENST00000489826	RASGRF1	Q13972	1273 aa		13.51	□□□□□ -0.25
UBA7-209	ENST00000489826	GRIN2C	Q14957	1233 aa		13.51	□□□□□ -0.25
UBA7-209	ENST00000489826	TRIM60	Q495X7	471 aa		13.51	□□□□□ -0.25
UBA7-209	ENST00000489826	GJC2	Q5T442	439 aa	Predicted RBP	13.51	□□□□□ -0.25
UBA7-209	ENST00000489826	SLC39A5	Q6ZMH5	540 aa		13.51	□□□□□ -0.25
UBA7-209	ENST00000489826	SH3RF1	Q7Z6J0	888 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms