RNA–Protein interactions for RNA: ENST00000489453.1

CHKB-211, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 722 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-211ENST00000489453 C19orf81C9J6K1 198 aa12.71□□□□□ -0.37
CHKB-211ENST00000489453 USP17L10C9JJH3 530 aa12.71□□□□□ -0.37
CHKB-211ENST00000489453 BCAR3O75815 825 aa12.71□□□□□ -0.37
CHKB-211ENST00000489453 GDF11O95390 407 aa12.71□□□□□ -0.37
CHKB-211ENST00000489453 CYP2B6P20813 491 aa12.71□□□□□ -0.37
CHKB-211ENST00000489453 HERVK_113P62684 666 aa12.71□□□□□ -0.37
CHKB-211ENST00000489453 FOXP4Q8IVH2 680 aaPredicted RBP12.71□□□□□ -0.37
CHKB-211ENST00000489453 GPRC5AQ8NFJ5 357 aa12.71□□□□□ -0.37
CHKB-211ENST00000489453 GTF3C2Q8WUA4 911 aaPredicted RBP12.71□□□□□ -0.37
CHKB-211ENST00000489453 SOCS4Q8WXH5 440 aa12.71□□□□□ -0.37
CHKB-211ENST00000489453 NUDT12Q9BQG2 462 aa12.71□□□□□ -0.37
CHKB-211ENST00000489453 DBNDD2Q9BQY9 259 aa12.71□□□□□ -0.37
CHKB-211ENST00000489453 NBPF3Q9H094 633 aa12.71□□□□□ -0.37
CHKB-211ENST00000489453 STAP2Q9UGK3 403 aa12.71□□□□□ -0.37
CHKB-211ENST00000489453 ZBTB21Q9ULJ3 1066 aa12.71□□□□□ -0.37
CHKB-211ENST00000489453 TNNQ9UQP3 1299 aa12.71□□□□□ -0.37
CHKB-211ENST00000489453 NAV1Q8NEY1 1877 aa12.71□□□□□ -0.37
CHKB-211ENST00000489453 CCER2I3L3R5 266 aa12.7□□□□□ -0.38
CHKB-211ENST00000489453 SURF6O75683 361 aaKnown RBP12.7□□□□□ -0.38
CHKB-211ENST00000489453 ZKSCAN1P17029 563 aaPredicted RBP12.7□□□□□ -0.38
CHKB-211ENST00000489453 MAPK4P31152 587 aa12.7□□□□□ -0.38
CHKB-211ENST00000489453 HOXA7P31268 230 aaPredicted RBP12.7□□□□□ -0.38
CHKB-211ENST00000489453 PPP4CP60510 307 aa12.7□□□□□ -0.38
CHKB-211ENST00000489453 ZKSCAN2Q63HK3 967 aa12.7□□□□□ -0.38
CHKB-211ENST00000489453 FTSJ3Q8IY81 847 aaKnown RBP12.7□□□□□ -0.38
CHKB-211ENST00000489453 TRMT44Q8IYL2 757 aaKnown RBP12.7□□□□□ -0.38
CHKB-211ENST00000489453 TMEM57Q8N5G2 664 aa12.7□□□□□ -0.38
CHKB-211ENST00000489453 P2RX7Q99572 595 aaKnown RBP12.7□□□□□ -0.38
CHKB-211ENST00000489453 FEZ1Q99689 392 aa12.7□□□□□ -0.38
CHKB-211ENST00000489453 PAGR1Q9BTK6 254 aa12.7□□□□□ -0.38
CHKB-211ENST00000489453 PRO3102Q9H379 93 aa12.7□□□□□ -0.38
CHKB-211ENST00000489453 C11orf49Q9H6J7 331 aa12.7□□□□□ -0.38
CHKB-211ENST00000489453 GJD2Q9UKL4 321 aa12.7□□□□□ -0.38
CHKB-211ENST00000489453 PALD1Q9ULE6 856 aa12.7□□□□□ -0.38
CHKB-211ENST00000489453 ZMYND8Q9ULU4 1186 aaPredicted RBP12.7□□□□□ -0.38
CHKB-211ENST00000489453 IGSF3O75054 1194 aa12.69□□□□□ -0.38
CHKB-211ENST00000489453 PRKAR2AP13861 404 aaKnown RBP12.69□□□□□ -0.38
CHKB-211ENST00000489453 CYP7A1P22680 504 aa12.69□□□□□ -0.38
CHKB-211ENST00000489453 ZAP70P43403 619 aa12.69□□□□□ -0.38
CHKB-211ENST00000489453 USP5P45974 858 aa12.69□□□□□ -0.38
CHKB-211ENST00000489453 TRIM32Q13049 653 aa12.69□□□□□ -0.38
CHKB-211ENST00000489453 USP17L2Q6R6M4 530 aa12.69□□□□□ -0.38
CHKB-211ENST00000489453 TRIB2Q92519 343 aa12.69□□□□□ -0.38
CHKB-211ENST00000489453 IDH1O75874 414 aaKnown RBP12.68□□□□□ -0.38
CHKB-211ENST00000489453 CYP2E1P05181 493 aaPredicted RBP12.68□□□□□ -0.38
CHKB-211ENST00000489453 RGS2P41220 211 aa12.68□□□□□ -0.38
CHKB-211ENST00000489453 ERVK-9P63128 1117 aa12.68□□□□□ -0.38
CHKB-211ENST00000489453 ERVK-24P63145 666 aa12.68□□□□□ -0.38
CHKB-211ENST00000489453 ADGRA1Q86SQ6 560 aa12.68□□□□□ -0.38
CHKB-211ENST00000489453 CERS3Q8IU89 383 aa12.68□□□□□ -0.38
CHKB-211ENST00000489453 C1orf115Q9H7X2 142 aa12.68□□□□□ -0.38
CHKB-211ENST00000489453 DNAJC18Q9H819 358 aa12.68□□□□□ -0.38
CHKB-211ENST00000489453 PIH1D3Q9NQM4 214 aaKnown RBP12.68□□□□□ -0.38
CHKB-211ENST00000489453 GLRX3O76003 335 aaKnown RBP12.67□□□□□ -0.38
CHKB-211ENST00000489453 XRCC5P13010 732 aaKnown RBP12.67□□□□□ -0.38
CHKB-211ENST00000489453 DYNLL1P63167 89 aaKnown RBP12.67□□□□□ -0.38
CHKB-211ENST00000489453 CCNA1P78396 465 aa12.67□□□□□ -0.38
CHKB-211ENST00000489453 ATP8B2P98198 1209 aa12.67□□□□□ -0.38
CHKB-211ENST00000489453 POLA2Q14181 598 aa12.67□□□□□ -0.38
CHKB-211ENST00000489453 ZYXQ15942 572 aaKnown RBP12.67□□□□□ -0.38
CHKB-211ENST00000489453 SHROOM1Q2M3G4 852 aaPredicted RBP12.67□□□□□ -0.38
CHKB-211ENST00000489453 WDR78Q5VTH9 848 aa12.67□□□□□ -0.38
CHKB-211ENST00000489453 PLEKHH3Q7Z736 793 aa12.67□□□□□ -0.38
CHKB-211ENST00000489453 ITPRIPQ8IWB1 547 aa12.67□□□□□ -0.38
CHKB-211ENST00000489453 MIGA1Q8NAN2 632 aa12.67□□□□□ -0.38
CHKB-211ENST00000489453 SSH3Q8TE77 659 aa12.67□□□□□ -0.38
CHKB-211ENST00000489453 ZNF512BQ96KM6 892 aaPredicted RBP12.67□□□□□ -0.38
CHKB-211ENST00000489453 APBA2Q99767 749 aa12.67□□□□□ -0.38
CHKB-211ENST00000489453 CCDC8Q9H0W5 538 aaPredicted RBP12.67□□□□□ -0.38
CHKB-211ENST00000489453 TXNRD2Q9NNW7 524 aa12.67□□□□□ -0.38
CHKB-211ENST00000489453 OGDHLQ9ULD0 1010 aa12.67□□□□□ -0.38
CHKB-211ENST00000489453 SOX1O00570 391 aaPredicted RBP12.66□□□□□ -0.38
CHKB-211ENST00000489453 PEX10O60683 326 aa12.66□□□□□ -0.38
CHKB-211ENST00000489453 GH2P01242 217 aa12.66□□□□□ -0.38
CHKB-211ENST00000489453 SYN1P17600 705 aa12.66□□□□□ -0.38
CHKB-211ENST00000489453 USP14P54578 494 aa12.66□□□□□ -0.38
CHKB-211ENST00000489453 JAG1P78504 1218 aa12.66□□□□□ -0.38
CHKB-211ENST00000489453 RAB3GAP1Q15042 981 aa12.66□□□□□ -0.38
CHKB-211ENST00000489453 GPR142Q7Z601 462 aa12.66□□□□□ -0.38
CHKB-211ENST00000489453 METTL16Q86W50 562 aaKnown RBP12.66□□□□□ -0.38
CHKB-211ENST00000489453 MAGEB6Q8N7X4 407 aa12.66□□□□□ -0.38
CHKB-211ENST00000489453 SLC17A8Q8NDX2 589 aa12.66□□□□□ -0.38
CHKB-211ENST00000489453 LRCH3Q96II8 777 aa12.66□□□□□ -0.38
CHKB-211ENST00000489453 RBPJLQ9UBG7 517 aa12.66□□□□□ -0.38
CHKB-211ENST00000489453 USP17L15C9J2P7 530 aa12.65□□□□□ -0.38
CHKB-211ENST00000489453 USP17L13C9JLJ4 530 aa12.65□□□□□ -0.38
CHKB-211ENST00000489453 USP17L11C9JVI0 530 aa12.65□□□□□ -0.38
CHKB-211ENST00000489453 USP17L18D6R9N7 530 aa12.65□□□□□ -0.38
CHKB-211ENST00000489453 USP17L22D6RA61 530 aa12.65□□□□□ -0.38
CHKB-211ENST00000489453 USP17L17D6RBQ6 530 aa12.65□□□□□ -0.38
CHKB-211ENST00000489453 USP17L19D6RCP7 530 aa12.65□□□□□ -0.38
CHKB-211ENST00000489453 USP17L20D6RJB6 530 aa12.65□□□□□ -0.38
CHKB-211ENST00000489453 BMP8BP34820 402 aa12.65□□□□□ -0.38
CHKB-211ENST00000489453 CACNB2Q08289 660 aaPredicted RBP12.65□□□□□ -0.38
CHKB-211ENST00000489453 USP17L24Q0WX57 530 aa12.65□□□□□ -0.38
CHKB-211ENST00000489453 MAP3K12Q12852 859 aa12.65□□□□□ -0.38
CHKB-211ENST00000489453 MAP3K21Q5TCX8 1036 aa12.65□□□□□ -0.38
CHKB-211ENST00000489453 MFSD14CQ5VZR4 134 aa12.65□□□□□ -0.38
CHKB-211ENST00000489453 TTC6Q86TZ1 520 aa12.65□□□□□ -0.38
CHKB-211ENST00000489453 GDF15Q99988 308 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms