RNA–Protein interactions for RNA: ENST00000489452.1

LINC00173-204, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 543 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-204ENST00000489452 P2RX7Q99572 595 aaKnown RBP16.34■□□□□ 0.21
LINC00173-204ENST00000489452 HTATIP2Q9BUP3 242 aa16.34■□□□□ 0.21
LINC00173-204ENST00000489452 WDR18Q9BV38 432 aa16.34■□□□□ 0.21
LINC00173-204ENST00000489452 DNAJC18Q9H819 358 aa16.34■□□□□ 0.21
LINC00173-204ENST00000489452 PTPRFP10586 1907 aa16.33■□□□□ 0.21
LINC00173-204ENST00000489452 USP5P45974 858 aa16.33■□□□□ 0.2
LINC00173-204ENST00000489452 CEP85Q6P2H3 762 aa16.33■□□□□ 0.2
LINC00173-204ENST00000489452 UBE2Q1Q7Z7E8 422 aa16.33■□□□□ 0.2
LINC00173-204ENST00000489452 MAGEB6Q8N7X4 407 aa16.33■□□□□ 0.2
LINC00173-204ENST00000489452 COL2A1P02458 1487 aaPredicted RBP16.33■□□□□ 0.2
LINC00173-204ENST00000489452 USP17L10C9JJH3 530 aa16.32■□□□□ 0.2
LINC00173-204ENST00000489452 HLA-DOAP06340 250 aa16.32■□□□□ 0.2
LINC00173-204ENST00000489452 AACSQ86V21 672 aa16.32■□□□□ 0.2
LINC00173-204ENST00000489452 METTL16Q86W50 562 aaKnown RBP16.32■□□□□ 0.2
LINC00173-204ENST00000489452 ANTXR1Q9H6X2 564 aa16.32■□□□□ 0.2
LINC00173-204ENST00000489452 GJD2Q9UKL4 321 aa16.32■□□□□ 0.2
LINC00173-204ENST00000489452 SZT2Q5T011 3432 aa16.31■□□□□ 0.2
LINC00173-204ENST00000489452 APBB1O00213 710 aa16.31■□□□□ 0.2
LINC00173-204ENST00000489452 TRIM32Q13049 653 aa16.31■□□□□ 0.2
LINC00173-204ENST00000489452 DIEXFQ68CQ4 756 aaKnown RBP16.31■□□□□ 0.2
LINC00173-204ENST00000489452 IL1RAPL2Q9NP60 686 aa16.31■□□□□ 0.2
LINC00173-204ENST00000489452 ZBTB21Q9ULJ3 1066 aa16.31■□□□□ 0.2
LINC00173-204ENST00000489452 NR2E3Q9Y5X4 410 aa16.31■□□□□ 0.2
LINC00173-204ENST00000489452 C19orf81C9J6K1 198 aa16.3■□□□□ 0.2
LINC00173-204ENST00000489452 GH2P01242 217 aa16.3■□□□□ 0.2
LINC00173-204ENST00000489452 CYP2B6P20813 491 aa16.3■□□□□ 0.2
LINC00173-204ENST00000489452 MAP3K12Q12852 859 aa16.3■□□□□ 0.2
LINC00173-204ENST00000489452 ZYXQ15942 572 aaKnown RBP16.3■□□□□ 0.2
LINC00173-204ENST00000489452 PAWRQ96IZ0 340 aaKnown RBP16.3■□□□□ 0.2
LINC00173-204ENST00000489452 TXNRD2Q9NNW7 524 aa16.3■□□□□ 0.2
LINC00173-204ENST00000489452 RBM27Q9P2N5 1060 aaKnown RBP16.3■□□□□ 0.2
LINC00173-204ENST00000489452 MYO5AQ9Y4I1 1855 aaKnown RBP16.3■□□□□ 0.2
LINC00173-204ENST00000489452 HOXA7P31268 230 aaPredicted RBP16.29■□□□□ 0.2
LINC00173-204ENST00000489452 HERVK_113P62684 666 aa16.29■□□□□ 0.2
LINC00173-204ENST00000489452 CCAR1Q8IX12 1150 aaKnown RBP16.29■□□□□ 0.2
LINC00173-204ENST00000489452 GPRC5AQ8NFJ5 357 aa16.29■□□□□ 0.2
LINC00173-204ENST00000489452 PAGR1Q9BTK6 254 aa16.29■□□□□ 0.2
LINC00173-204ENST00000489452 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.29■□□□□ 0.2
LINC00173-204ENST00000489452 PAK6Q9NQU5 681 aaPredicted RBP16.29■□□□□ 0.2
LINC00173-204ENST00000489452 EMILIN3Q9NT22 766 aa16.29■□□□□ 0.2
LINC00173-204ENST00000489452 MORF4L1Q9UBU8 362 aa16.29■□□□□ 0.2
LINC00173-204ENST00000489452 EVI5O60447 810 aa16.28■□□□□ 0.2
LINC00173-204ENST00000489452 HMGCRP04035 888 aa16.28■□□□□ 0.2
LINC00173-204ENST00000489452 RAB3GAP1Q15042 981 aa16.28■□□□□ 0.2
LINC00173-204ENST00000489452 Q3C1V9 767 aa16.28■□□□□ 0.2
LINC00173-204ENST00000489452 USP17L2Q6R6M4 530 aa16.28■□□□□ 0.2
LINC00173-204ENST00000489452 ERC1Q8IUD2 1116 aa16.28■□□□□ 0.2
LINC00173-204ENST00000489452 DIS3LQ8TF46 1054 aaKnown RBP16.28■□□□□ 0.2
LINC00173-204ENST00000489452 FEZ1Q99689 392 aa16.28■□□□□ 0.2
LINC00173-204ENST00000489452 GINM1Q9NU53 330 aa16.28■□□□□ 0.2
LINC00173-204ENST00000489452 RBPJLQ9UBG7 517 aa16.28■□□□□ 0.2
LINC00173-204ENST00000489452 ATAD5Q96QE3 1844 aa16.28■□□□□ 0.2
LINC00173-204ENST00000489452 IGSF3O75054 1194 aa16.27■□□□□ 0.2
LINC00173-204ENST00000489452 RHPN1Q8TCX5 695 aa16.27■□□□□ 0.2
LINC00173-204ENST00000489452 CRISPLD2Q9H0B8 497 aa16.27■□□□□ 0.2
LINC00173-204ENST00000489452 HMX1Q9NP08 348 aaPredicted RBP16.27■□□□□ 0.2
LINC00173-204ENST00000489452 SERPINB13Q9UIV8 391 aa16.27■□□□□ 0.2
LINC00173-204ENST00000489452 POLR3DP05423 398 aaPredicted RBP16.26■□□□□ 0.19
LINC00173-204ENST00000489452 PLCD1P51178 756 aa16.26■□□□□ 0.19
LINC00173-204ENST00000489452 CERKLQ49MI3 558 aaPredicted RBP16.26■□□□□ 0.19
LINC00173-204ENST00000489452 TATDN1Q6P1N9 297 aa16.26■□□□□ 0.19
LINC00173-204ENST00000489452 NECAB2Q7Z6G3 386 aa16.26■□□□□ 0.19
LINC00173-204ENST00000489452 TTC6Q86TZ1 520 aa16.26■□□□□ 0.19
LINC00173-204ENST00000489452 NUDT12Q9BQG2 462 aa16.26■□□□□ 0.19
LINC00173-204ENST00000489452 PORCNQ9H237 461 aa16.26■□□□□ 0.19
LINC00173-204ENST00000489452 CWC22Q9HCG8 908 aaKnown RBP16.26■□□□□ 0.19
LINC00173-204ENST00000489452 SIPA1L1O43166 1804 aa16.26■□□□□ 0.19
LINC00173-204ENST00000489452 RPTORQ8N122 1335 aa16.25■□□□□ 0.19
LINC00173-204ENST00000489452 MAGEB6P1A0A0J9YX57 407 aa16.25■□□□□ 0.19
LINC00173-204ENST00000489452 ERVK-9P63128 1117 aa16.25■□□□□ 0.19
LINC00173-204ENST00000489452 ERVK-24P63145 666 aa16.25■□□□□ 0.19
LINC00173-204ENST00000489452 PDE3AQ14432 1141 aa16.25■□□□□ 0.19
LINC00173-204ENST00000489452 ABCB5Q2M3G0 1257 aa16.25■□□□□ 0.19
LINC00173-204ENST00000489452 HSP90AB4PQ58FF6 505 aa16.25■□□□□ 0.19
LINC00173-204ENST00000489452 SLC9C2Q5TAH2 1124 aa16.25■□□□□ 0.19
LINC00173-204ENST00000489452 POTEEQ6S8J3 1075 aa16.25■□□□□ 0.19
LINC00173-204ENST00000489452 CERS3Q8IU89 383 aa16.25■□□□□ 0.19
LINC00173-204ENST00000489452 ACER1Q8TDN7 264 aa16.25■□□□□ 0.19
LINC00173-204ENST00000489452 TRIB2Q92519 343 aa16.25■□□□□ 0.19
LINC00173-204ENST00000489452 DNAJC2Q99543 621 aaKnown RBP16.25■□□□□ 0.19
LINC00173-204ENST00000489452 LOC285556D6RIA3 1793 aa16.25■□□□□ 0.19
LINC00173-204ENST00000489452 USP17L15C9J2P7 530 aa16.24■□□□□ 0.19
LINC00173-204ENST00000489452 USP17L13C9JLJ4 530 aa16.24■□□□□ 0.19
LINC00173-204ENST00000489452 USP17L11C9JVI0 530 aa16.24■□□□□ 0.19
LINC00173-204ENST00000489452 USP17L18D6R9N7 530 aa16.24■□□□□ 0.19
LINC00173-204ENST00000489452 USP17L22D6RA61 530 aa16.24■□□□□ 0.19
LINC00173-204ENST00000489452 USP17L17D6RBQ6 530 aa16.24■□□□□ 0.19
LINC00173-204ENST00000489452 USP17L19D6RCP7 530 aa16.24■□□□□ 0.19
LINC00173-204ENST00000489452 USP17L20D6RJB6 530 aa16.24■□□□□ 0.19
LINC00173-204ENST00000489452 GOLIM4O00461 696 aa16.24■□□□□ 0.19
LINC00173-204ENST00000489452 MAPK4P31152 587 aa16.24■□□□□ 0.19
LINC00173-204ENST00000489452 USP17L24Q0WX57 530 aa16.24■□□□□ 0.19
LINC00173-204ENST00000489452 WDR78Q5VTH9 848 aa16.24■□□□□ 0.19
LINC00173-204ENST00000489452 CLASRPQ8N2M8 674 aaKnown RBP16.24■□□□□ 0.19
LINC00173-204ENST00000489452 CABP5Q9NP86 173 aa16.24■□□□□ 0.19
LINC00173-204ENST00000489452 STAP2Q9UGK3 403 aa16.24■□□□□ 0.19
LINC00173-204ENST00000489452 COG6Q9Y2V7 657 aa16.24■□□□□ 0.19
LINC00173-204ENST00000489452 ZBED9Q6R2W3 1325 aa16.23■□□□□ 0.19
LINC00173-204ENST00000489452 CDK5RAP2Q96SN8 1893 aa16.23■□□□□ 0.19
LINC00173-204ENST00000489452 IFIT2P09913 472 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms