RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 BCRP11274 1271 aa22.89■■□□□ 1.25
MRPL55-230ENST00000489430 PLCD1P51178 756 aa22.89■■□□□ 1.25
MRPL55-230ENST00000489430 CERKLQ49MI3 558 aaPredicted RBP22.89■■□□□ 1.25
MRPL55-230ENST00000489430 CCDC84Q86UT8 332 aaPredicted RBP22.89■■□□□ 1.25
MRPL55-230ENST00000489430 SDR42E1Q8WUS8 393 aa22.89■■□□□ 1.25
MRPL55-230ENST00000489430 CPA4Q9UI42 421 aa22.89■■□□□ 1.25
MRPL55-230ENST00000489430 CYP2C8P10632 490 aa22.88■■□□□ 1.25
MRPL55-230ENST00000489430 MX1P20591 662 aa22.88■■□□□ 1.25
MRPL55-230ENST00000489430 PI4K2BQ8TCG2 481 aa22.88■■□□□ 1.25
MRPL55-230ENST00000489430 RWDD1Q9H446 243 aaPredicted RBP22.88■■□□□ 1.25
MRPL55-230ENST00000489430 SWAP70Q9UH65 585 aa22.88■■□□□ 1.25
MRPL55-230ENST00000489430 PHIPQ8WWQ0 1821 aa22.87■■□□□ 1.25
MRPL55-230ENST00000489430 USP17L10C9JJH3 530 aa22.87■■□□□ 1.25
MRPL55-230ENST00000489430 GDF11O95390 407 aa22.87■■□□□ 1.25
MRPL55-230ENST00000489430 HOXD10P28358 340 aa22.87■■□□□ 1.25
MRPL55-230ENST00000489430 HMGCS2P54868 508 aa22.87■■□□□ 1.25
MRPL55-230ENST00000489430 JAG1P78504 1218 aa22.87■■□□□ 1.25
MRPL55-230ENST00000489430 ANKRD45Q5TZF3 282 aa22.87■■□□□ 1.25
MRPL55-230ENST00000489430 AMOTL1Q8IY63 956 aa22.87■■□□□ 1.25
MRPL55-230ENST00000489430 SMCR8Q8TEV9 937 aaPredicted RBP22.87■■□□□ 1.25
MRPL55-230ENST00000489430 APPBP2Q92624 585 aa22.87■■□□□ 1.25
MRPL55-230ENST00000489430 CABP5Q9NP86 173 aa22.87■■□□□ 1.25
MRPL55-230ENST00000489430 TMOD4Q9NZQ9 345 aa22.87■■□□□ 1.25
MRPL55-230ENST00000489430 SALL3Q9BXA9 1300 aa22.86■■□□□ 1.25
MRPL55-230ENST00000489430 RNF113AO15541 343 aaKnown RBP22.86■■□□□ 1.25
MRPL55-230ENST00000489430 GH2P01242 217 aa22.86■■□□□ 1.25
MRPL55-230ENST00000489430 HOXA7P31268 230 aaPredicted RBP22.86■■□□□ 1.25
MRPL55-230ENST00000489430 SHMT1P34896 483 aa22.86■■□□□ 1.25
MRPL55-230ENST00000489430 CAP1Q01518 475 aa22.86■■□□□ 1.25
MRPL55-230ENST00000489430 ABCB5Q2M3G0 1257 aa22.86■■□□□ 1.25
MRPL55-230ENST00000489430 SLC4A8Q2Y0W8 1093 aa22.86■■□□□ 1.25
MRPL55-230ENST00000489430 TSHZ3Q63HK5 1081 aa22.86■■□□□ 1.25
MRPL55-230ENST00000489430 GIMAP6Q6P9H5 292 aa22.86■■□□□ 1.25
MRPL55-230ENST00000489430 PUS7LQ9H0K6 701 aaKnown RBP22.86■■□□□ 1.25
MRPL55-230ENST00000489430 OSBPP22059 807 aa22.85■■□□□ 1.25
MRPL55-230ENST00000489430 GCLCP48506 637 aaPredicted RBP22.85■■□□□ 1.25
MRPL55-230ENST00000489430 MTMR2Q13614 643 aa22.85■■□□□ 1.25
MRPL55-230ENST00000489430 SLFNL1Q499Z3 407 aa22.85■■□□□ 1.25
MRPL55-230ENST00000489430 TREML2Q5T2D2 321 aa22.85■■□□□ 1.25
MRPL55-230ENST00000489430 TICAM2Q86XR7 235 aa22.85■■□□□ 1.25
MRPL55-230ENST00000489430 ARMC5Q96C12 935 aa22.85■■□□□ 1.25
MRPL55-230ENST00000489430 STAP2Q9UGK3 403 aa22.85■■□□□ 1.25
MRPL55-230ENST00000489430 SLC4A4Q9Y6R1 1079 aa22.85■■□□□ 1.25
MRPL55-230ENST00000489430 DDX60LQ5H9U9 1706 aaKnown RBP22.85■■□□□ 1.25
MRPL55-230ENST00000489430 PRKAB2O43741 272 aa22.84■■□□□ 1.25
MRPL55-230ENST00000489430 GNAT2P19087 354 aa22.84■■□□□ 1.25
MRPL55-230ENST00000489430 PSMC4P43686 418 aa22.84■■□□□ 1.25
MRPL55-230ENST00000489430 C12orf60Q5U649 245 aa22.84■■□□□ 1.25
MRPL55-230ENST00000489430 SMC5Q8IY18 1101 aa22.84■■□□□ 1.25
MRPL55-230ENST00000489430 STRBPQ96SI9 672 aaKnown RBP22.84■■□□□ 1.25
MRPL55-230ENST00000489430 HTTP42858 3142 aa22.84■■□□□ 1.25
MRPL55-230ENST00000489430 MYH1P12882 1939 aa22.83■■□□□ 1.25
MRPL55-230ENST00000489430 USP14P54578 494 aa22.83■■□□□ 1.25
MRPL55-230ENST00000489430 FCGRTP55899 365 aa22.83■■□□□ 1.25
MRPL55-230ENST00000489430 FAM110CQ1W6H9 321 aa22.83■■□□□ 1.25
MRPL55-230ENST00000489430 USP17L2Q6R6M4 530 aa22.83■■□□□ 1.25
MRPL55-230ENST00000489430 NBPF11Q86T75 865 aa22.83■■□□□ 1.25
MRPL55-230ENST00000489430 OTUD7AQ8TE49 926 aaPredicted RBP22.83■■□□□ 1.25
MRPL55-230ENST00000489430 C12orf42Q96LP6 360 aa22.83■■□□□ 1.25
MRPL55-230ENST00000489430 PTPRFP10586 1907 aa22.82■■□□□ 1.24
MRPL55-230ENST00000489430 CHGBP05060 677 aa22.82■■□□□ 1.24
MRPL55-230ENST00000489430 OSBP2Q969R2 916 aa22.82■■□□□ 1.24
MRPL55-230ENST00000489430 TRIM47Q96LD4 638 aa22.82■■□□□ 1.24
MRPL55-230ENST00000489430 CCDC17Q96LX7 622 aa22.82■■□□□ 1.24
MRPL55-230ENST00000489430 ARHGAP39Q9C0H5 1083 aa22.82■■□□□ 1.24
MRPL55-230ENST00000489430 KIAA1683Q9H0B3 1180 aa22.82■■□□□ 1.24
MRPL55-230ENST00000489430 ARPP21Q9UBL0 812 aaPredicted RBP22.82■■□□□ 1.24
MRPL55-230ENST00000489430 SRRDQ9UH36 339 aa22.82■■□□□ 1.24
MRPL55-230ENST00000489430 SUPT16HQ9Y5B9 1047 aaKnown RBP22.82■■□□□ 1.24
MRPL55-230ENST00000489430 USP17L12C9JPN9 530 aa22.81■■□□□ 1.24
MRPL55-230ENST00000489430 USP17L21D6R901 530 aa22.81■■□□□ 1.24
MRPL55-230ENST00000489430 FMNL1O95466 1100 aaPredicted RBP22.81■■□□□ 1.24
MRPL55-230ENST00000489430 RAB3GAP1Q15042 981 aa22.81■■□□□ 1.24
MRPL55-230ENST00000489430 SHROOM1Q2M3G4 852 aaPredicted RBP22.81■■□□□ 1.24
MRPL55-230ENST00000489430 EXOC6Q8TAG9 804 aa22.81■■□□□ 1.24
MRPL55-230ENST00000489430 GTF3C2Q8WUA4 911 aaPredicted RBP22.81■■□□□ 1.24
MRPL55-230ENST00000489430 ASCC2Q9H1I8 757 aaPredicted RBP22.81■■□□□ 1.24
MRPL55-230ENST00000489430 LOC285556D6RIA3 1793 aa22.81■■□□□ 1.24
MRPL55-230ENST00000489430 ATAD5Q96QE3 1844 aa22.8■■□□□ 1.24
MRPL55-230ENST00000489430 PDE1AP54750 535 aa22.8■■□□□ 1.24
MRPL55-230ENST00000489430 IRX3P78415 501 aaPredicted RBP22.8■■□□□ 1.24
MRPL55-230ENST00000489430 MLLT1Q03111 559 aaPredicted RBP22.8■■□□□ 1.24
MRPL55-230ENST00000489430 SBK1Q52WX2 424 aa22.8■■□□□ 1.24
MRPL55-230ENST00000489430 TMEM179Q6ZVK1 233 aa22.8■■□□□ 1.24
MRPL55-230ENST00000489430 EMILIN3Q9NT22 766 aa22.8■■□□□ 1.24
MRPL55-230ENST00000489430 PTCH2Q9Y6C5 1203 aa22.8■■□□□ 1.24
MRPL55-230ENST00000489430 GPAA1O43292 621 aa22.79■■□□□ 1.24
MRPL55-230ENST00000489430 CYP2D6P10635 497 aa22.79■■□□□ 1.24
MRPL55-230ENST00000489430 CTGFP29279 349 aa22.79■■□□□ 1.24
MRPL55-230ENST00000489430 SLC9C1Q4G0N8 1177 aa22.79■■□□□ 1.24
MRPL55-230ENST00000489430 CTR9Q6PD62 1173 aa22.79■■□□□ 1.24
MRPL55-230ENST00000489430 C16orf86Q6ZW13 317 aa22.79■■□□□ 1.24
MRPL55-230ENST00000489430 EVI5LQ96CN4 794 aa22.79■■□□□ 1.24
MRPL55-230ENST00000489430 FEZ1Q99689 392 aa22.79■■□□□ 1.24
MRPL55-230ENST00000489430 FSD1Q9BTV5 496 aa22.79■■□□□ 1.24
MRPL55-230ENST00000489430 NAV1Q8NEY1 1877 aa22.79■■□□□ 1.24
MRPL55-230ENST00000489430 GSG1L2A8MUP6 293 aa22.78■■□□□ 1.24
MRPL55-230ENST00000489430 GUCY1A2P33402 732 aa22.78■■□□□ 1.24
MRPL55-230ENST00000489430 ANKRD13CQ8N6S4 541 aa22.78■■□□□ 1.24
MRPL55-230ENST00000489430 MORF4L1Q9UBU8 362 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms