RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 ITIH2P19823 946 aa6.71□□□□□ -1.34
XRN1-213ENST00000489241 RPS26P62854 115 aaKnown RBP6.71□□□□□ -1.34
XRN1-213ENST00000489241 RASIP1Q5U651 963 aa6.71□□□□□ -1.34
XRN1-213ENST00000489241 PCNX4Q63HM2 1172 aa6.71□□□□□ -1.34
XRN1-213ENST00000489241 POU5F2Q8N7G0 328 aa6.71□□□□□ -1.34
XRN1-213ENST00000489241 KCT2Q8NC54 265 aa6.71□□□□□ -1.34
XRN1-213ENST00000489241 RC3H2Q9HBD1 1191 aaKnown RBP6.71□□□□□ -1.34
XRN1-213ENST00000489241 PCDHA4Q9UN74 947 aa6.71□□□□□ -1.34
XRN1-213ENST00000489241 IGF2BP3O00425 579 aaKnown RBP eCLIP6.7□□□□□ -1.34
XRN1-213ENST00000489241 CD96P40200 585 aa6.7□□□□□ -1.34
XRN1-213ENST00000489241 LIG3P49916 1009 aa6.7□□□□□ -1.34
XRN1-213ENST00000489241 MAP3K11Q16584 847 aa6.7□□□□□ -1.34
XRN1-213ENST00000489241 ANGEL2Q5VTE6 544 aaKnown RBP6.7□□□□□ -1.34
XRN1-213ENST00000489241 FAM214BQ7L5A3 538 aa6.7□□□□□ -1.34
XRN1-213ENST00000489241 UBE3DQ7Z6J8 389 aa6.7□□□□□ -1.34
XRN1-213ENST00000489241 ATG4DQ86TL0 474 aaPredicted RBP6.7□□□□□ -1.34
XRN1-213ENST00000489241 C12orf40Q86WS4 652 aa6.7□□□□□ -1.34
XRN1-213ENST00000489241 ELMO3Q96BJ8 720 aa6.7□□□□□ -1.34
XRN1-213ENST00000489241 HEXIM2Q96MH2 286 aaKnown RBP6.7□□□□□ -1.34
XRN1-213ENST00000489241 MBNL3Q9NUK0 354 aaKnown RBP6.7□□□□□ -1.34
XRN1-213ENST00000489241 ADAMTS6Q9UKP5 1117 aa6.7□□□□□ -1.34
XRN1-213ENST00000489241 SNX11Q9Y5W9 270 aa6.7□□□□□ -1.34
XRN1-213ENST00000489241 RNASE1P07998 156 aaKnown RBP6.69□□□□□ -1.34
XRN1-213ENST00000489241 GBP2P32456 591 aaPredicted RBP6.69□□□□□ -1.34
XRN1-213ENST00000489241 CDC37L1Q7L3B6 337 aa6.69□□□□□ -1.34
XRN1-213ENST00000489241 PI4K2BQ8TCG2 481 aa6.69□□□□□ -1.34
XRN1-213ENST00000489241 TGIF2Q9GZN2 237 aa6.69□□□□□ -1.34
XRN1-213ENST00000489241 MINDY4BA8MYZ0 360 aa6.68□□□□□ -1.34
XRN1-213ENST00000489241 SF3A1Q15459 793 aaKnown RBP6.68□□□□□ -1.34
XRN1-213ENST00000489241 AGMOQ6ZNB7 445 aa6.68□□□□□ -1.34
XRN1-213ENST00000489241 ARMCX6Q7L4S7 300 aa6.68□□□□□ -1.34
XRN1-213ENST00000489241 ERMP1Q7Z2K6 904 aa6.68□□□□□ -1.34
XRN1-213ENST00000489241 SPACA3Q8IXA5 215 aa6.68□□□□□ -1.34
XRN1-213ENST00000489241 LRRN4CLQ8ND94 238 aa6.68□□□□□ -1.34
XRN1-213ENST00000489241 TMEM74Q96NL1 305 aa6.68□□□□□ -1.34
XRN1-213ENST00000489241 TINF2Q9BSI4 451 aa6.68□□□□□ -1.34
XRN1-213ENST00000489241 PPP1R1BQ9UD71 204 aaPredicted RBP6.68□□□□□ -1.34
XRN1-213ENST00000489241 PRAMEF27A3QJZ7 478 aa6.67□□□□□ -1.34
XRN1-213ENST00000489241 LRIG2O94898 1065 aa6.67□□□□□ -1.34
XRN1-213ENST00000489241 LRFN4Q6PJG9 635 aa6.67□□□□□ -1.34
XRN1-213ENST00000489241 USP48Q86UV5 1035 aa6.67□□□□□ -1.34
XRN1-213ENST00000489241 ZNF507Q8TCN5 953 aa6.67□□□□□ -1.34
XRN1-213ENST00000489241 ASB11Q8WXH4 323 aa6.67□□□□□ -1.34
XRN1-213ENST00000489241 UBXN4Q92575 508 aa6.67□□□□□ -1.34
XRN1-213ENST00000489241 GAL3ST3Q96A11 431 aa6.67□□□□□ -1.34
XRN1-213ENST00000489241 MIR1-1HGQ9H1L0 117 aa6.67□□□□□ -1.34
XRN1-213ENST00000489241 CCSER2Q9H7U1 834 aa6.67□□□□□ -1.34
XRN1-213ENST00000489241 PRDM5Q9NQX1 630 aaPredicted RBP6.67□□□□□ -1.34
XRN1-213ENST00000489241 KBTBD4Q9NVX7 518 aa6.67□□□□□ -1.34
XRN1-213ENST00000489241 MAPK8IP1Q9UQF2 711 aa6.67□□□□□ -1.34
XRN1-213ENST00000489241 GNAT3A8MTJ3 354 aa6.66□□□□□ -1.34
XRN1-213ENST00000489241 EOMESO95936 686 aa6.66□□□□□ -1.34
XRN1-213ENST00000489241 C8AP07357 584 aa6.66□□□□□ -1.34
XRN1-213ENST00000489241 CLCN7P51798 805 aa6.66□□□□□ -1.34
XRN1-213ENST00000489241 LMNB2Q03252 620 aa6.66□□□□□ -1.34
XRN1-213ENST00000489241 SLC23A3Q6PIS1 610 aa6.66□□□□□ -1.34
XRN1-213ENST00000489241 HDXQ7Z353 690 aa6.66□□□□□ -1.34
XRN1-213ENST00000489241 PHC3Q8NDX5 983 aa6.66□□□□□ -1.34
XRN1-213ENST00000489241 ACBD3Q9H3P7 528 aa6.66□□□□□ -1.34
XRN1-213ENST00000489241 TLR6Q9Y2C9 796 aa6.66□□□□□ -1.34
XRN1-213ENST00000489241 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.66□□□□□ -1.34
XRN1-213ENST00000489241 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.66□□□□□ -1.34
XRN1-213ENST00000489241 CARMIL2Q6F5E8 1435 aa6.66□□□□□ -1.34
XRN1-213ENST00000489241 PF4P02776 101 aa6.65□□□□□ -1.34
XRN1-213ENST00000489241 TFE3P19532 575 aaPredicted RBP6.65□□□□□ -1.34
XRN1-213ENST00000489241 IKZF1Q13422 519 aa6.65□□□□□ -1.34
XRN1-213ENST00000489241 CAMK2GQ13555 558 aaPredicted RBP6.65□□□□□ -1.34
XRN1-213ENST00000489241 INPP5AQ14642 412 aa6.65□□□□□ -1.34
XRN1-213ENST00000489241 NKPD1Q17RQ9 610 aa6.65□□□□□ -1.34
XRN1-213ENST00000489241 CYFIP1Q7L576 1253 aa6.65□□□□□ -1.34
XRN1-213ENST00000489241 ZNF654Q8IZM8 581 aa6.65□□□□□ -1.34
XRN1-213ENST00000489241 SLC43A3Q8NBI5 491 aa6.65□□□□□ -1.34
XRN1-213ENST00000489241 FAM168AQ92567 244 aa6.65□□□□□ -1.34
XRN1-213ENST00000489241 PLPPR2Q96GM1 343 aa6.65□□□□□ -1.34
XRN1-213ENST00000489241 FOXQ1Q9C009 403 aa6.65□□□□□ -1.34
XRN1-213ENST00000489241 CAPN10Q9HC96 672 aa6.65□□□□□ -1.34
XRN1-213ENST00000489241 COPRSQ9NQ92 184 aa6.65□□□□□ -1.34
XRN1-213ENST00000489241 F6X3S4 739 aa6.64□□□□□ -1.35
XRN1-213ENST00000489241 EIF4A3P38919 411 aaKnown RBP6.64□□□□□ -1.35
XRN1-213ENST00000489241 CAP2P40123 477 aa6.64□□□□□ -1.35
XRN1-213ENST00000489241 TNNI2P48788 182 aa6.64□□□□□ -1.35
XRN1-213ENST00000489241 PTPN11Q06124 597 aaPredicted RBP6.64□□□□□ -1.35
XRN1-213ENST00000489241 ZNF394Q53GI3 561 aa6.64□□□□□ -1.35
XRN1-213ENST00000489241 WIPI1Q5MNZ9 446 aaPredicted RBP6.64□□□□□ -1.35
XRN1-213ENST00000489241 CCDC84Q86UT8 332 aaPredicted RBP6.64□□□□□ -1.35
XRN1-213ENST00000489241 FLAD1Q8NFF5 587 aa6.64□□□□□ -1.35
XRN1-213ENST00000489241 JARID2Q92833 1246 aaPredicted RBP6.64□□□□□ -1.35
XRN1-213ENST00000489241 WNT10AQ9GZT5 417 aa6.64□□□□□ -1.35
XRN1-213ENST00000489241 FBRSQ9HAH7 460 aa6.64□□□□□ -1.35
XRN1-213ENST00000489241 DDX41Q9UJV9 622 aaKnown RBP6.64□□□□□ -1.35
XRN1-213ENST00000489241 PCDHB5Q9Y5E4 795 aa6.64□□□□□ -1.35
XRN1-213ENST00000489241 SNCAIPQ9Y6H5 919 aa6.64□□□□□ -1.35
XRN1-213ENST00000489241 PITPNM2Q9BZ72 1349 aa6.64□□□□□ -1.35
XRN1-213ENST00000489241 SLITRK5O94991 958 aa6.63□□□□□ -1.35
XRN1-213ENST00000489241 RACK1P63244 317 aaKnown RBP6.63□□□□□ -1.35
XRN1-213ENST00000489241 ZP2Q05996 745 aa6.63□□□□□ -1.35
XRN1-213ENST00000489241 SNAP47Q5SQN1 464 aa6.63□□□□□ -1.35
XRN1-213ENST00000489241 C22orf34Q6ZV56 151 aa6.63□□□□□ -1.35
XRN1-213ENST00000489241 TANGO6Q9C0B7 1094 aa6.63□□□□□ -1.35
XRN1-213ENST00000489241 PCDHGB7Q9Y5F8 929 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms