RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 CERKLQ49MI3 558 aaPredicted RBP28.88■■■□□ 2.21
PTPN18-213ENST00000489215 EXOC6Q8TAG9 804 aa28.88■■■□□ 2.21
PTPN18-213ENST00000489215 PI4K2BQ8TCG2 481 aa28.88■■■□□ 2.21
PTPN18-213ENST00000489215 CD99L2Q8TCZ2 262 aa28.88■■■□□ 2.21
PTPN18-213ENST00000489215 CABP5Q9NP86 173 aa28.88■■■□□ 2.21
PTPN18-213ENST00000489215 PLCD1P51178 756 aa28.87■■■□□ 2.21
PTPN18-213ENST00000489215 SH3D19Q5HYK7 790 aa28.87■■■□□ 2.21
PTPN18-213ENST00000489215 TSHZ3Q63HK5 1081 aa28.87■■■□□ 2.21
PTPN18-213ENST00000489215 C17orf99Q6UX52 265 aa28.87■■■□□ 2.21
PTPN18-213ENST00000489215 OTOP1Q7RTM1 612 aa28.87■■■□□ 2.21
PTPN18-213ENST00000489215 APPBP2Q92624 585 aa28.87■■■□□ 2.21
PTPN18-213ENST00000489215 SWAP70Q9UH65 585 aa28.87■■■□□ 2.21
PTPN18-213ENST00000489215 ZBTB21Q9ULJ3 1066 aa28.87■■■□□ 2.21
PTPN18-213ENST00000489215 SMC5Q8IY18 1101 aa28.86■■■□□ 2.21
PTPN18-213ENST00000489215 SLC4A4Q9Y6R1 1079 aa28.86■■■□□ 2.21
PTPN18-213ENST00000489215 USP17L10C9JJH3 530 aa28.85■■■□□ 2.21
PTPN18-213ENST00000489215 GDF11O95390 407 aa28.85■■■□□ 2.21
PTPN18-213ENST00000489215 BACE1P56817 501 aa28.85■■■□□ 2.21
PTPN18-213ENST00000489215 CCDC84Q86UT8 332 aaPredicted RBP28.85■■■□□ 2.21
PTPN18-213ENST00000489215 PUS7LQ9H0K6 701 aaKnown RBP28.85■■■□□ 2.21
PTPN18-213ENST00000489215 TMOD4Q9NZQ9 345 aa28.85■■■□□ 2.21
PTPN18-213ENST00000489215 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.85■■■□□ 2.21
PTPN18-213ENST00000489215 STAP2Q9UGK3 403 aa28.85■■■□□ 2.21
PTPN18-213ENST00000489215 HPS5Q9UPZ3 1129 aa28.85■■■□□ 2.21
PTPN18-213ENST00000489215 DDX60LQ5H9U9 1706 aaKnown RBP28.85■■■□□ 2.21
PTPN18-213ENST00000489215 GNAT2P19087 354 aa28.84■■■□□ 2.21
PTPN18-213ENST00000489215 LACTBP83111 547 aaPredicted RBP28.84■■■□□ 2.21
PTPN18-213ENST00000489215 GABPAQ06546 454 aa28.84■■■□□ 2.21
PTPN18-213ENST00000489215 ABCB5Q2M3G0 1257 aa28.84■■■□□ 2.21
PTPN18-213ENST00000489215 TICAM2Q86XR7 235 aa28.84■■■□□ 2.21
PTPN18-213ENST00000489215 SALL3Q9BXA9 1300 aa28.84■■■□□ 2.21
PTPN18-213ENST00000489215 GH2P01242 217 aa28.83■■■□□ 2.21
PTPN18-213ENST00000489215 HMGCS2P54868 508 aa28.83■■■□□ 2.21
PTPN18-213ENST00000489215 SLFNL1Q499Z3 407 aa28.83■■■□□ 2.21
PTPN18-213ENST00000489215 GIMAP6Q6P9H5 292 aa28.83■■■□□ 2.21
PTPN18-213ENST00000489215 OTUD7AQ8TE49 926 aaPredicted RBP28.83■■■□□ 2.21
PTPN18-213ENST00000489215 SMCR8Q8TEV9 937 aaPredicted RBP28.83■■■□□ 2.21
PTPN18-213ENST00000489215 OSBPP22059 807 aa28.82■■■□□ 2.2
PTPN18-213ENST00000489215 PRMT2P55345 433 aa28.82■■■□□ 2.2
PTPN18-213ENST00000489215 STRBPQ96SI9 672 aaKnown RBP28.82■■■□□ 2.2
PTPN18-213ENST00000489215 FSD1Q9BTV5 496 aa28.82■■■□□ 2.2
PTPN18-213ENST00000489215 CPA4Q9UI42 421 aa28.82■■■□□ 2.2
PTPN18-213ENST00000489215 PTPN22Q9Y2R2 807 aa28.82■■■□□ 2.2
PTPN18-213ENST00000489215 ADGRA2Q96PE1 1338 aa28.82■■■□□ 2.2
PTPN18-213ENST00000489215 PRKAB2O43741 272 aa28.81■■■□□ 2.2
PTPN18-213ENST00000489215 CYP2C8P10632 490 aa28.81■■■□□ 2.2
PTPN18-213ENST00000489215 HOXD10P28358 340 aa28.81■■■□□ 2.2
PTPN18-213ENST00000489215 SHMT1P34896 483 aa28.81■■■□□ 2.2
PTPN18-213ENST00000489215 PDE1AP54750 535 aa28.81■■■□□ 2.2
PTPN18-213ENST00000489215 LOC285556D6RIA3 1793 aa28.8■■■□□ 2.2
PTPN18-213ENST00000489215 MTMR2Q13614 643 aa28.8■■■□□ 2.2
PTPN18-213ENST00000489215 C12orf60Q5U649 245 aa28.8■■■□□ 2.2
PTPN18-213ENST00000489215 EVI5LQ96CN4 794 aa28.8■■■□□ 2.2
PTPN18-213ENST00000489215 ARPP21Q9UBL0 812 aaPredicted RBP28.8■■■□□ 2.2
PTPN18-213ENST00000489215 USP17L12C9JPN9 530 aa28.79■■■□□ 2.2
PTPN18-213ENST00000489215 USP17L21D6R901 530 aa28.79■■■□□ 2.2
PTPN18-213ENST00000489215 GCLCP48506 637 aaPredicted RBP28.79■■■□□ 2.2
PTPN18-213ENST00000489215 USP14P54578 494 aa28.79■■■□□ 2.2
PTPN18-213ENST00000489215 JAG1P78504 1218 aa28.79■■■□□ 2.2
PTPN18-213ENST00000489215 RAB3GAP1Q15042 981 aa28.79■■■□□ 2.2
PTPN18-213ENST00000489215 USP17L2Q6R6M4 530 aa28.79■■■□□ 2.2
PTPN18-213ENST00000489215 OSBP2Q969R2 916 aa28.79■■■□□ 2.2
PTPN18-213ENST00000489215 BAZ2AQ9UIF9 1905 aaKnown RBP28.79■■■□□ 2.2
PTPN18-213ENST00000489215 CHGBP05060 677 aa28.78■■■□□ 2.2
PTPN18-213ENST00000489215 BCRP11274 1271 aa28.78■■■□□ 2.2
PTPN18-213ENST00000489215 CHD1LQ86WJ1 897 aa28.78■■■□□ 2.2
PTPN18-213ENST00000489215 CCDC17Q96LX7 622 aa28.78■■■□□ 2.2
PTPN18-213ENST00000489215 LNPKQ9C0E8 428 aa28.78■■■□□ 2.2
PTPN18-213ENST00000489215 GPAA1O43292 621 aa28.77■■■□□ 2.2
PTPN18-213ENST00000489215 IGHDP01880 384 aa28.77■■■□□ 2.2
PTPN18-213ENST00000489215 HOXA7P31268 230 aaPredicted RBP28.77■■■□□ 2.2
PTPN18-213ENST00000489215 SBK1Q52WX2 424 aa28.77■■■□□ 2.2
PTPN18-213ENST00000489215 TREML2Q5T2D2 321 aa28.77■■■□□ 2.2
PTPN18-213ENST00000489215 NUCB1Q02818 461 aa28.76■■■□□ 2.19
PTPN18-213ENST00000489215 B4GALNT3Q6L9W6 998 aa28.76■■■□□ 2.19
PTPN18-213ENST00000489215 FEZ1Q99689 392 aa28.76■■■□□ 2.19
PTPN18-213ENST00000489215 MYH8P13535 1937 aa28.76■■■□□ 2.19
PTPN18-213ENST00000489215 MPHOSPH10O00566 681 aaKnown RBP28.75■■■□□ 2.19
PTPN18-213ENST00000489215 PSMC4P43686 418 aa28.75■■■□□ 2.19
PTPN18-213ENST00000489215 FCGRTP55899 365 aa28.75■■■□□ 2.19
PTPN18-213ENST00000489215 IRX3P78415 501 aaPredicted RBP28.75■■■□□ 2.19
PTPN18-213ENST00000489215 CTR9Q6PD62 1173 aa28.75■■■□□ 2.19
PTPN18-213ENST00000489215 TMEM179Q6ZVK1 233 aa28.75■■■□□ 2.19
PTPN18-213ENST00000489215 NBPF11Q86T75 865 aa28.75■■■□□ 2.19
PTPN18-213ENST00000489215 NACAP1Q9BZK3 213 aa28.75■■■□□ 2.19
PTPN18-213ENST00000489215 KIAA1683Q9H0B3 1180 aa28.75■■■□□ 2.19
PTPN18-213ENST00000489215 GSG1L2A8MUP6 293 aa28.74■■■□□ 2.19
PTPN18-213ENST00000489215 PATL2C9JE40 543 aaKnown RBP28.74■■■□□ 2.19
PTPN18-213ENST00000489215 FMNL1O95466 1100 aaPredicted RBP28.74■■■□□ 2.19
PTPN18-213ENST00000489215 CYP2D6P10635 497 aa28.74■■■□□ 2.19
PTPN18-213ENST00000489215 C16orf86Q6ZW13 317 aa28.74■■■□□ 2.19
PTPN18-213ENST00000489215 C12orf42Q96LP6 360 aa28.74■■■□□ 2.19
PTPN18-213ENST00000489215 ASCC2Q9H1I8 757 aaPredicted RBP28.74■■■□□ 2.19
PTPN18-213ENST00000489215 ZNF287Q9HBT7 754 aa28.74■■■□□ 2.19
PTPN18-213ENST00000489215 APPP05067 770 aa28.73■■■□□ 2.19
PTPN18-213ENST00000489215 CDK8P49336 464 aa28.73■■■□□ 2.19
PTPN18-213ENST00000489215 RGS19P49795 217 aa28.73■■■□□ 2.19
PTPN18-213ENST00000489215 FAM110CQ1W6H9 321 aa28.73■■■□□ 2.19
PTPN18-213ENST00000489215 SHROOM1Q2M3G4 852 aaPredicted RBP28.73■■■□□ 2.19
PTPN18-213ENST00000489215 ZMYM1Q5SVZ6 1142 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms