RNA–Protein interactions for RNA: ENST00000489048.1

NEB-215, Transcript of nebulin, humanhuman

TSL 1 (best)

Gene NEB, Length 2,738 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-215ENST00000489048 USP5P45974 858 aa12.52□□□□□ -0.41
NEB-215ENST00000489048 SPECC1Q5M775 1068 aa12.52□□□□□ -0.41
NEB-215ENST00000489048 LDHAL6AQ6ZMR3 332 aa12.52□□□□□ -0.41
NEB-215ENST00000489048 SRGAP1Q7Z6B7 1085 aa12.52□□□□□ -0.41
NEB-215ENST00000489048 IFNL3Q8IZI9 196 aa12.52□□□□□ -0.41
NEB-215ENST00000489048 FAM177A1Q8N128 213 aaPredicted RBP12.52□□□□□ -0.41
NEB-215ENST00000489048 CABLES1Q8TDN4 633 aa12.52□□□□□ -0.41
NEB-215ENST00000489048 STAG1Q8WVM7 1258 aa12.52□□□□□ -0.41
NEB-215ENST00000489048 MYL10Q9BUA6 226 aa12.52□□□□□ -0.41
NEB-215ENST00000489048 SAMSN1Q9NSI8 373 aaKnown RBP12.52□□□□□ -0.41
NEB-215ENST00000489048 RAB21Q9UL25 225 aa12.52□□□□□ -0.41
NEB-215ENST00000489048 ADGRG1Q9Y653 693 aa12.52□□□□□ -0.41
NEB-215ENST00000489048 TACC3Q9Y6A5 838 aa12.52□□□□□ -0.41
NEB-215ENST00000489048 ANKRD18BA2A2Z9 1011 aa12.51□□□□□ -0.41
NEB-215ENST00000489048 IDH1O75874 414 aaKnown RBP12.51□□□□□ -0.41
NEB-215ENST00000489048 CTSWP56202 376 aa12.51□□□□□ -0.41
NEB-215ENST00000489048 GPS2Q13227 327 aa12.51□□□□□ -0.41
NEB-215ENST00000489048 AKNAD1Q5T1N1 836 aa12.51□□□□□ -0.41
NEB-215ENST00000489048 CDKAL1Q5VV42 579 aa12.51□□□□□ -0.41
NEB-215ENST00000489048 SPATA1Q5VX52 437 aa12.51□□□□□ -0.41
NEB-215ENST00000489048 KIF6Q6ZMV9 814 aa12.51□□□□□ -0.41
NEB-215ENST00000489048 SH3RF1Q7Z6J0 888 aa12.51□□□□□ -0.41
NEB-215ENST00000489048 TRIM22Q8IYM9 498 aa12.51□□□□□ -0.41
NEB-215ENST00000489048 CEP112Q8N8E3 955 aa12.51□□□□□ -0.41
NEB-215ENST00000489048 MSANTD4Q8NCY6 345 aa12.51□□□□□ -0.41
NEB-215ENST00000489048 CCDC12Q8WUD4 166 aaPredicted RBP12.51□□□□□ -0.41
NEB-215ENST00000489048 AIDAQ96BJ3 306 aa12.51□□□□□ -0.41
NEB-215ENST00000489048 AATFQ9NY61 560 aaKnown RBP eCLIP12.51□□□□□ -0.41
NEB-215ENST00000489048 MYH3P11055 1940 aa12.51□□□□□ -0.41
NEB-215ENST00000489048 TOGARAM1Q9Y4F4 1720 aa12.51□□□□□ -0.41
NEB-215ENST00000489048 ITIH6Q6UXX5 1313 aa12.51□□□□□ -0.41
NEB-215ENST00000489048 POLR3GO15318 223 aaPredicted RBP12.51□□□□□ -0.41
NEB-215ENST00000489048 PDE8BO95263 885 aa12.51□□□□□ -0.41
NEB-215ENST00000489048 CUL4BQ13620 913 aa12.51□□□□□ -0.41
NEB-215ENST00000489048 RTN1Q16799 776 aa12.51□□□□□ -0.41
NEB-215ENST00000489048 LONRF2Q1L5Z9 754 aa12.51□□□□□ -0.41
NEB-215ENST00000489048 GIGYF2Q6Y7W6 1299 aaKnown RBP12.51□□□□□ -0.41
NEB-215ENST00000489048 RASGRP2Q7LDG7 609 aa12.51□□□□□ -0.41
NEB-215ENST00000489048 TRMT44Q8IYL2 757 aaKnown RBP12.51□□□□□ -0.41
NEB-215ENST00000489048 CCDC51Q96ER9 411 aa12.51□□□□□ -0.41
NEB-215ENST00000489048 PODXL2Q9NZ53 605 aa12.51□□□□□ -0.41
NEB-215ENST00000489048 PCDHB6Q9Y5E3 794 aa12.51□□□□□ -0.41
NEB-215ENST00000489048 ANKRD36CQ5JPF3 1778 aa12.51□□□□□ -0.41
NEB-215ENST00000489048 FGFR2P21802 821 aa12.5□□□□□ -0.41
NEB-215ENST00000489048 ZNF827Q17R98 1081 aa12.5□□□□□ -0.41
NEB-215ENST00000489048 RAD9BQ6WBX8 426 aa12.5□□□□□ -0.41
NEB-215ENST00000489048 CRACR2BQ8N4Y2 399 aaPredicted RBP12.5□□□□□ -0.41
NEB-215ENST00000489048 EXOC4Q96A65 974 aa12.5□□□□□ -0.41
NEB-215ENST00000489048 CCDC34Q96HJ3 373 aa12.5□□□□□ -0.41
NEB-215ENST00000489048 CCDC85AQ96PX6 553 aaPredicted RBP12.5□□□□□ -0.41
NEB-215ENST00000489048 CTAGE1Q96RT6 745 aa12.5□□□□□ -0.41
NEB-215ENST00000489048 DESI2Q9BSY9 194 aa12.5□□□□□ -0.41
NEB-215ENST00000489048 TSPYL1Q9H0U9 437 aa12.5□□□□□ -0.41
NEB-215ENST00000489048 GREM2Q9H772 168 aa12.5□□□□□ -0.41
NEB-215ENST00000489048 SEC31BQ9NQW1 1179 aa12.5□□□□□ -0.41
NEB-215ENST00000489048 STRN4Q9NRL3 753 aa12.5□□□□□ -0.41
NEB-215ENST00000489048 ADD3Q9UEY8 706 aaKnown RBP12.5□□□□□ -0.41
NEB-215ENST00000489048 CDC23Q9UJX2 597 aa12.5□□□□□ -0.41
NEB-215ENST00000489048 BCORQ6W2J9 1755 aa12.5□□□□□ -0.41
NEB-215ENST00000489048 CCDC196A0A1B0GTZ2 297 aa12.5□□□□□ -0.41
NEB-215ENST00000489048 SOWAHDA6NJG2 315 aa12.5□□□□□ -0.41
NEB-215ENST00000489048 PHKA1P46020 1223 aa12.5□□□□□ -0.41
NEB-215ENST00000489048 CHMP4BP1P59074 171 aa12.5□□□□□ -0.41
NEB-215ENST00000489048 KARSQ15046 597 aaKnown RBP12.5□□□□□ -0.41
NEB-215ENST00000489048 TMTC2Q8N394 836 aa12.5□□□□□ -0.41
NEB-215ENST00000489048 DDX17Q92841 729 aaKnown RBP12.5□□□□□ -0.41
NEB-215ENST00000489048 NAPBQ9H115 298 aa12.5□□□□□ -0.41
NEB-215ENST00000489048 KCNJ14Q9UNX9 436 aa12.5□□□□□ -0.41
NEB-215ENST00000489048 MFAP3LO75121 409 aa12.49□□□□□ -0.41
NEB-215ENST00000489048 ATF3P18847 181 aa12.49□□□□□ -0.41
NEB-215ENST00000489048 ST5P78524 1137 aa12.49□□□□□ -0.41
NEB-215ENST00000489048 MTF1Q14872 753 aa12.49□□□□□ -0.41
NEB-215ENST00000489048 HSP90AA4PQ58FG1 418 aa12.49□□□□□ -0.41
NEB-215ENST00000489048 NLRP10Q86W26 655 aa12.49□□□□□ -0.41
NEB-215ENST00000489048 GRAMD1CQ8IYS0 662 aa12.49□□□□□ -0.41
NEB-215ENST00000489048 CSRNP2Q9H175 543 aa12.49□□□□□ -0.41
NEB-215ENST00000489048 ANKZF1Q9H8Y5 726 aa12.49□□□□□ -0.41
NEB-215ENST00000489048 CNNM1Q9NRU3 951 aa12.49□□□□□ -0.41
NEB-215ENST00000489048 PNPLA7Q6ZV29 1317 aa12.49□□□□□ -0.41
NEB-215ENST00000489048 COL5A2P05997 1499 aaPredicted RBP12.49□□□□□ -0.41
NEB-215ENST00000489048 TEX33O43247 280 aa12.49□□□□□ -0.41
NEB-215ENST00000489048 CTDSPL2Q05D32 466 aa12.49□□□□□ -0.41
NEB-215ENST00000489048 NEK11Q8NG66 645 aa12.49□□□□□ -0.41
NEB-215ENST00000489048 LPIN2Q92539 896 aa12.49□□□□□ -0.41
NEB-215ENST00000489048 SYNRGQ9UMZ2 1314 aa12.49□□□□□ -0.41
NEB-215ENST00000489048 GSG1L2A8MUP6 293 aa12.48□□□□□ -0.41
NEB-215ENST00000489048 KIF5CO60282 957 aa12.48□□□□□ -0.41
NEB-215ENST00000489048 GNAT2P19087 354 aa12.48□□□□□ -0.41
NEB-215ENST00000489048 RBL2Q08999 1139 aa12.48□□□□□ -0.41
NEB-215ENST00000489048 WTAPQ15007 396 aa12.48□□□□□ -0.41
NEB-215ENST00000489048 SART3Q15020 963 aaKnown RBP12.48□□□□□ -0.41
NEB-215ENST00000489048 PPP2R5BQ15173 497 aa12.48□□□□□ -0.41
NEB-215ENST00000489048 PUM3Q15397 648 aaKnown RBP12.48□□□□□ -0.41
NEB-215ENST00000489048 BEND6Q5SZJ8 279 aaPredicted RBP12.48□□□□□ -0.41
NEB-215ENST00000489048 MFSD6Q6ZSS7 791 aa12.48□□□□□ -0.41
NEB-215ENST00000489048 PPFIBP1Q86W92 1011 aa12.48□□□□□ -0.41
NEB-215ENST00000489048 IGSF22Q8N9C0 903 aa12.48□□□□□ -0.41
NEB-215ENST00000489048 INCENPQ9NQS7 918 aa12.48□□□□□ -0.41
NEB-215ENST00000489048 PLCH1Q4KWH8 1693 aa12.48□□□□□ -0.41
NEB-215ENST00000489048 NR5A1Q13285 461 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms