RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 PNMA3Q9UL41 463 aa27.9■■■□□ 2.06
COL9A3-213ENST00000489045 ZBTB21Q9ULJ3 1066 aa27.9■■■□□ 2.06
COL9A3-213ENST00000489045 MYPNQ86TC9 1320 aa27.9■■■□□ 2.06
COL9A3-213ENST00000489045 SMARCA5O60264 1052 aaPredicted RBP27.89■■■□□ 2.06
COL9A3-213ENST00000489045 HOXD10P28358 340 aa27.89■■■□□ 2.06
COL9A3-213ENST00000489045 MTMR2Q13614 643 aa27.89■■■□□ 2.06
COL9A3-213ENST00000489045 SH3D19Q5HYK7 790 aa27.89■■■□□ 2.06
COL9A3-213ENST00000489045 GINM1Q9NU53 330 aa27.89■■■□□ 2.06
COL9A3-213ENST00000489045 TCRBV5S4A2TA0A5A2 114 aa27.88■■■□□ 2.05
COL9A3-213ENST00000489045 EHD4Q9H223 541 aa27.88■■■□□ 2.05
COL9A3-213ENST00000489045 MYCP01106 439 aaPredicted RBP27.87■■■□□ 2.05
COL9A3-213ENST00000489045 PABPC4Q13310 644 aaKnown RBP eCLIP27.87■■■□□ 2.05
COL9A3-213ENST00000489045 TTC6Q86TZ1 520 aa27.87■■■□□ 2.05
COL9A3-213ENST00000489045 TMEM106CQ9BVX2 250 aa27.87■■■□□ 2.05
COL9A3-213ENST00000489045 CRNKL1Q9BZJ0 848 aaKnown RBP27.87■■■□□ 2.05
COL9A3-213ENST00000489045 SERPINB13Q9UIV8 391 aa27.87■■■□□ 2.05
COL9A3-213ENST00000489045 BRCA2P51587 3418 aa27.87■■■□□ 2.05
COL9A3-213ENST00000489045 BACE1P56817 501 aa27.86■■■□□ 2.05
COL9A3-213ENST00000489045 PRKCZQ05513 592 aa27.86■■■□□ 2.05
COL9A3-213ENST00000489045 ANKRD13CQ8N6S4 541 aa27.86■■■□□ 2.05
COL9A3-213ENST00000489045 RAET1EQ8TD07 263 aa27.86■■■□□ 2.05
COL9A3-213ENST00000489045 HAUS7Q99871 368 aa27.86■■■□□ 2.05
COL9A3-213ENST00000489045 TATDN1Q6P1N9 297 aa27.85■■■□□ 2.05
COL9A3-213ENST00000489045 LCORLQ8N3X6 602 aa27.85■■■□□ 2.05
COL9A3-213ENST00000489045 ASCC2Q9H1I8 757 aaPredicted RBP27.85■■■□□ 2.05
COL9A3-213ENST00000489045 DOCK3Q8IZD9 2030 aa27.85■■■□□ 2.05
COL9A3-213ENST00000489045 MYH8P13535 1937 aa27.84■■■□□ 2.05
COL9A3-213ENST00000489045 BAZ2AQ9UIF9 1905 aaKnown RBP27.84■■■□□ 2.05
COL9A3-213ENST00000489045 GH2P01242 217 aa27.84■■■□□ 2.05
COL9A3-213ENST00000489045 EN2P19622 333 aaPredicted RBP27.84■■■□□ 2.05
COL9A3-213ENST00000489045 PLCD1P51178 756 aa27.84■■■□□ 2.05
COL9A3-213ENST00000489045 TMOD4Q9NZQ9 345 aa27.84■■■□□ 2.05
COL9A3-213ENST00000489045 USP17L10C9JJH3 530 aa27.83■■■□□ 2.05
COL9A3-213ENST00000489045 ADD2P35612 726 aa27.83■■■□□ 2.05
COL9A3-213ENST00000489045 FAM110CQ1W6H9 321 aa27.83■■■□□ 2.05
COL9A3-213ENST00000489045 SLFNL1Q499Z3 407 aa27.83■■■□□ 2.05
COL9A3-213ENST00000489045 SDR42E1Q8WUS8 393 aa27.83■■■□□ 2.05
COL9A3-213ENST00000489045 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.83■■■□□ 2.05
COL9A3-213ENST00000489045 DCTPP1Q9H773 170 aa27.83■■■□□ 2.05
COL9A3-213ENST00000489045 GABRQQ9UN88 632 aa27.83■■■□□ 2.05
COL9A3-213ENST00000489045 C19orf81C9J6K1 198 aa27.82■■■□□ 2.04
COL9A3-213ENST00000489045 POLR3DP05423 398 aaPredicted RBP27.82■■■□□ 2.04
COL9A3-213ENST00000489045 GRK4P32298 578 aa27.82■■■□□ 2.04
COL9A3-213ENST00000489045 ARMT1Q9H993 441 aa27.82■■■□□ 2.04
COL9A3-213ENST00000489045 TNPO2O14787 897 aaKnown RBP27.81■■■□□ 2.04
COL9A3-213ENST00000489045 GCLCP48506 637 aaPredicted RBP27.81■■■□□ 2.04
COL9A3-213ENST00000489045 MCM9Q9NXL9 1143 aa27.81■■■□□ 2.04
COL9A3-213ENST00000489045 MBD4O95243 580 aa27.8■■■□□ 2.04
COL9A3-213ENST00000489045 CHGBP05060 677 aa27.8■■■□□ 2.04
COL9A3-213ENST00000489045 SHMT1P34896 483 aa27.8■■■□□ 2.04
COL9A3-213ENST00000489045 RRP1P56182 461 aaKnown RBP27.8■■■□□ 2.04
COL9A3-213ENST00000489045 IRX3P78415 501 aaPredicted RBP27.8■■■□□ 2.04
COL9A3-213ENST00000489045 CERKLQ49MI3 558 aaPredicted RBP27.8■■■□□ 2.04
COL9A3-213ENST00000489045 DCP1AQ9NPI6 582 aaPredicted RBP27.8■■■□□ 2.04
COL9A3-213ENST00000489045 EVX2Q03828 476 aa27.79■■■□□ 2.04
COL9A3-213ENST00000489045 ABCB5Q2M3G0 1257 aa27.79■■■□□ 2.04
COL9A3-213ENST00000489045 ECHDC1Q9NTX5 307 aa27.79■■■□□ 2.04
COL9A3-213ENST00000489045 HOXA7P31268 230 aaPredicted RBP27.78■■■□□ 2.04
COL9A3-213ENST00000489045 FLT3LGP49771 235 aa27.78■■■□□ 2.04
COL9A3-213ENST00000489045 GABPAQ06546 454 aa27.78■■■□□ 2.04
COL9A3-213ENST00000489045 RAB3GAP1Q15042 981 aa27.78■■■□□ 2.04
COL9A3-213ENST00000489045 MTFR1Q15390 333 aa27.78■■■□□ 2.04
COL9A3-213ENST00000489045 USP17L2Q6R6M4 530 aa27.77■■■□□ 2.04
COL9A3-213ENST00000489045 SLAIN1Q8ND83 568 aa27.77■■■□□ 2.04
COL9A3-213ENST00000489045 COA7Q96BR5 231 aa27.77■■■□□ 2.04
COL9A3-213ENST00000489045 EMILIN3Q9NT22 766 aa27.77■■■□□ 2.04
COL9A3-213ENST00000489045 PCDHB15Q9Y5E8 787 aa27.77■■■□□ 2.04
COL9A3-213ENST00000489045 MKI67P46013 3256 aaKnown RBP27.77■■■□□ 2.04
COL9A3-213ENST00000489045 PRKAB2O43741 272 aa27.76■■■□□ 2.03
COL9A3-213ENST00000489045 CYP2D6P10635 497 aa27.76■■■□□ 2.03
COL9A3-213ENST00000489045 UBE3CQ15386 1083 aa27.76■■■□□ 2.03
COL9A3-213ENST00000489045 ZYXQ15942 572 aaKnown RBP27.76■■■□□ 2.03
COL9A3-213ENST00000489045 PRPF38BQ5VTL8 546 aaKnown RBP27.76■■■□□ 2.03
COL9A3-213ENST00000489045 P2RX7Q99572 595 aaKnown RBP27.76■■■□□ 2.03
COL9A3-213ENST00000489045 FEZ1Q99689 392 aa27.76■■■□□ 2.03
COL9A3-213ENST00000489045 CABP5Q9NP86 173 aa27.76■■■□□ 2.03
COL9A3-213ENST00000489045 BIN2Q9UBW5 565 aaPredicted RBP27.76■■■□□ 2.03
COL9A3-213ENST00000489045 ADCY3O60266 1144 aa27.75■■■□□ 2.03
COL9A3-213ENST00000489045 ZSCAN25Q6NSZ9 544 aa27.75■■■□□ 2.03
COL9A3-213ENST00000489045 GPATCH3Q96I76 525 aa27.75■■■□□ 2.03
COL9A3-213ENST00000489045 YTHDC1Q96MU7 727 aaKnown RBP27.75■■■□□ 2.03
COL9A3-213ENST00000489045 MORF4L1Q9UBU8 362 aa27.75■■■□□ 2.03
COL9A3-213ENST00000489045 PLXNB2O15031 1838 aa27.75■■■□□ 2.03
COL9A3-213ENST00000489045 HERVK_113P62684 666 aa27.74■■■□□ 2.03
COL9A3-213ENST00000489045 UBXN2AP68543 259 aa27.74■■■□□ 2.03
COL9A3-213ENST00000489045 IRF5Q13568 498 aa27.74■■■□□ 2.03
COL9A3-213ENST00000489045 TSHZ3Q63HK5 1081 aa27.74■■■□□ 2.03
COL9A3-213ENST00000489045 C12orf42Q96LP6 360 aa27.74■■■□□ 2.03
COL9A3-213ENST00000489045 ATP8A2Q9NTI2 1148 aa27.74■■■□□ 2.03
COL9A3-213ENST00000489045 CCL5P13501 91 aa27.73■■■□□ 2.03
COL9A3-213ENST00000489045 ELNP15502 786 aa27.73■■■□□ 2.03
COL9A3-213ENST00000489045 GUCY1A2P33402 732 aa27.73■■■□□ 2.03
COL9A3-213ENST00000489045 ACER1Q8TDN7 264 aa27.73■■■□□ 2.03
COL9A3-213ENST00000489045 PEX10O60683 326 aa27.72■■■□□ 2.03
COL9A3-213ENST00000489045 SLC44A5Q8NCS7 719 aa27.72■■■□□ 2.03
COL9A3-213ENST00000489045 PXYLP1Q8TE99 480 aa27.72■■■□□ 2.03
COL9A3-213ENST00000489045 KIAA1683Q9H0B3 1180 aa27.72■■■□□ 2.03
COL9A3-213ENST00000489045 PUS7LQ9H0K6 701 aaKnown RBP27.72■■■□□ 2.03
COL9A3-213ENST00000489045 TAOK2Q9UL54 1235 aa27.72■■■□□ 2.03
COL9A3-213ENST00000489045 MPHOSPH10O00566 681 aaKnown RBP27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms