RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 TMEM87BQ96K49 555 aa6.4□□□□□ -1.38
RFC4-213ENST00000489028 BSDC1Q9NW68 430 aaPredicted RBP6.4□□□□□ -1.38
RFC4-213ENST00000489028 OAS3Q9Y6K5 1087 aaKnown RBP6.4□□□□□ -1.38
RFC4-213ENST00000489028 DNAJA2O60884 412 aa6.39□□□□□ -1.39
RFC4-213ENST00000489028 ITIH2P19823 946 aa6.39□□□□□ -1.39
RFC4-213ENST00000489028 VAMP1P23763 118 aa6.39□□□□□ -1.39
RFC4-213ENST00000489028 ZNF76P36508 570 aa6.39□□□□□ -1.39
RFC4-213ENST00000489028 GP2P55259 537 aaKnown RBP6.39□□□□□ -1.39
RFC4-213ENST00000489028 MPP2Q14168 576 aa6.39□□□□□ -1.39
RFC4-213ENST00000489028 ZNF574Q6ZN55 896 aaPredicted RBP6.39□□□□□ -1.39
RFC4-213ENST00000489028 REC114Q7Z4M0 266 aa6.39□□□□□ -1.39
RFC4-213ENST00000489028 NETO1Q8TDF5 533 aa6.39□□□□□ -1.39
RFC4-213ENST00000489028 ZNF296Q8WUU4 475 aaPredicted RBP6.39□□□□□ -1.39
RFC4-213ENST00000489028 ADAM30Q9UKF2 790 aa6.39□□□□□ -1.39
RFC4-213ENST00000489028 PRR36Q9H6K5 1346 aa6.39□□□□□ -1.39
RFC4-213ENST00000489028 PRR33A8MZF0 331 aa6.38□□□□□ -1.39
RFC4-213ENST00000489028 UPK3BL1B0FP48 263 aa6.38□□□□□ -1.39
RFC4-213ENST00000489028 UPK3BL2E5RIL1 263 aa6.38□□□□□ -1.39
RFC4-213ENST00000489028 WNT11O96014 354 aa6.38□□□□□ -1.39
RFC4-213ENST00000489028 CEACAM5P06731 702 aa6.38□□□□□ -1.39
RFC4-213ENST00000489028 PLCG1P19174 1290 aa6.38□□□□□ -1.39
RFC4-213ENST00000489028 PDE4BQ07343 736 aa6.38□□□□□ -1.39
RFC4-213ENST00000489028 ZNF394Q53GI3 561 aa6.38□□□□□ -1.39
RFC4-213ENST00000489028 LETMD1Q6P1Q0 360 aa6.38□□□□□ -1.39
RFC4-213ENST00000489028 VSIG10LQ86VR7 867 aa6.38□□□□□ -1.39
RFC4-213ENST00000489028 MCATQ8IVS2 390 aaKnown RBP6.38□□□□□ -1.39
RFC4-213ENST00000489028 MFSD2AQ8NA29 543 aa6.38□□□□□ -1.39
RFC4-213ENST00000489028 BCL7CQ8WUZ0 217 aaPredicted RBP6.38□□□□□ -1.39
RFC4-213ENST00000489028 MRRFQ96E11 262 aaKnown RBP6.38□□□□□ -1.39
RFC4-213ENST00000489028 LRRC3Q9BY71 257 aa6.38□□□□□ -1.39
RFC4-213ENST00000489028 BCL11AQ9H165 835 aa6.38□□□□□ -1.39
RFC4-213ENST00000489028 SUPT16HQ9Y5B9 1047 aaKnown RBP6.38□□□□□ -1.39
RFC4-213ENST00000489028 PCDHGB7Q9Y5F8 929 aa6.38□□□□□ -1.39
RFC4-213ENST00000489028 IGF2BP3O00425 579 aaKnown RBP eCLIP6.37□□□□□ -1.39
RFC4-213ENST00000489028 HTR3BO95264 441 aa6.37□□□□□ -1.39
RFC4-213ENST00000489028 CD96P40200 585 aa6.37□□□□□ -1.39
RFC4-213ENST00000489028 BNIP3Q12983 259 aa6.37□□□□□ -1.39
RFC4-213ENST00000489028 NKPD1Q17RQ9 610 aa6.37□□□□□ -1.39
RFC4-213ENST00000489028 TMEM201Q5SNT2 666 aa6.37□□□□□ -1.39
RFC4-213ENST00000489028 SLC6A19Q695T7 634 aa6.37□□□□□ -1.39
RFC4-213ENST00000489028 SPRED2Q7Z698 418 aa6.37□□□□□ -1.39
RFC4-213ENST00000489028 TNKS2Q9H2K2 1166 aa6.37□□□□□ -1.39
RFC4-213ENST00000489028 MKNK2Q9HBH9 465 aa6.37□□□□□ -1.39
RFC4-213ENST00000489028 BRMS1Q9HCU9 246 aa6.37□□□□□ -1.39
RFC4-213ENST00000489028 PAK6Q9NQU5 681 aaPredicted RBP6.37□□□□□ -1.39
RFC4-213ENST00000489028 PRDM5Q9NQX1 630 aaPredicted RBP6.37□□□□□ -1.39
RFC4-213ENST00000489028 UBP1Q9NZI7 540 aa6.37□□□□□ -1.39
RFC4-213ENST00000489028 REV1Q9UBZ9 1251 aa6.37□□□□□ -1.39
RFC4-213ENST00000489028 RACK1P63244 317 aaKnown RBP6.36□□□□□ -1.39
RFC4-213ENST00000489028 CDH24Q86UP0 819 aa6.36□□□□□ -1.39
RFC4-213ENST00000489028 METTL16Q86W50 562 aaKnown RBP6.36□□□□□ -1.39
RFC4-213ENST00000489028 SPACA3Q8IXA5 215 aa6.36□□□□□ -1.39
RFC4-213ENST00000489028 DNAJB8Q8NHS0 232 aa6.36□□□□□ -1.39
RFC4-213ENST00000489028 PPP1R13LQ8WUF5 828 aa6.36□□□□□ -1.39
RFC4-213ENST00000489028 EAF1Q96JC9 268 aaPredicted RBP6.36□□□□□ -1.39
RFC4-213ENST00000489028 METTL5Q9NRN9 209 aaKnown RBP6.36□□□□□ -1.39
RFC4-213ENST00000489028 GTF2IRD1Q9UHL9 959 aa6.36□□□□□ -1.39
RFC4-213ENST00000489028 ANGEL1Q9UNK9 670 aaKnown RBP6.36□□□□□ -1.39
RFC4-213ENST00000489028 CHURC1-FNTBB4DL54 471 aa6.35□□□□□ -1.39
RFC4-213ENST00000489028 IFI16Q16666 785 aaKnown RBP6.35□□□□□ -1.39
RFC4-213ENST00000489028 ARHGAP27Q6ZUM4 889 aa6.35□□□□□ -1.39
RFC4-213ENST00000489028 USP48Q86UV5 1035 aa6.35□□□□□ -1.39
RFC4-213ENST00000489028 ABI1Q8IZP0 508 aa6.35□□□□□ -1.39
RFC4-213ENST00000489028 FAM13CQ8NE31 585 aa6.35□□□□□ -1.39
RFC4-213ENST00000489028 FLCNQ8NFG4 579 aa6.35□□□□□ -1.39
RFC4-213ENST00000489028 ZNF428Q96B54 188 aa6.35□□□□□ -1.39
RFC4-213ENST00000489028 TPX2Q9ULW0 747 aaKnown RBP6.35□□□□□ -1.39
RFC4-213ENST00000489028 MAPK8IP1Q9UQF2 711 aa6.35□□□□□ -1.39
RFC4-213ENST00000489028 CCDC9Q9Y3X0 531 aaKnown RBP6.35□□□□□ -1.39
RFC4-213ENST00000489028 ROBO2Q9HCK4 1378 aa6.34□□□□□ -1.39
RFC4-213ENST00000489028 SCAMP3O14828 347 aaKnown RBP6.34□□□□□ -1.39
RFC4-213ENST00000489028 CWF19L2Q2TBE0 894 aaKnown RBP6.34□□□□□ -1.39
RFC4-213ENST00000489028 SEZ6Q53EL9 994 aa6.34□□□□□ -1.39
RFC4-213ENST00000489028 RNF34Q969K3 372 aa6.34□□□□□ -1.39
RFC4-213ENST00000489028 KLHL3Q9UH77 587 aa6.34□□□□□ -1.39
RFC4-213ENST00000489028 SLC5A6Q9Y289 635 aa6.34□□□□□ -1.39
RFC4-213ENST00000489028 PCDHB14Q9Y5E9 798 aa6.34□□□□□ -1.39
RFC4-213ENST00000489028 GNAT3A8MTJ3 354 aa6.33□□□□□ -1.4
RFC4-213ENST00000489028 ZNF865P0CJ78 1059 aaPredicted RBP6.33□□□□□ -1.4
RFC4-213ENST00000489028 CD8BP10966 210 aa6.33□□□□□ -1.4
RFC4-213ENST00000489028 HDLBPQ00341 1268 aaKnown RBP6.33□□□□□ -1.4
RFC4-213ENST00000489028 PRKCQQ04759 706 aa6.33□□□□□ -1.4
RFC4-213ENST00000489028 CLCQ05315 142 aa6.33□□□□□ -1.4
RFC4-213ENST00000489028 APOBRQ0VD83 1088 aa6.33□□□□□ -1.4
RFC4-213ENST00000489028 AOC3Q16853 763 aa6.33□□□□□ -1.4
RFC4-213ENST00000489028 SFRP5Q5T4F7 317 aa6.33□□□□□ -1.4
RFC4-213ENST00000489028 C9orf131Q5VYM1 1079 aa6.33□□□□□ -1.4
RFC4-213ENST00000489028 DIEXFQ68CQ4 756 aaKnown RBP6.33□□□□□ -1.4
RFC4-213ENST00000489028 C22orf34Q6ZV56 151 aa6.33□□□□□ -1.4
RFC4-213ENST00000489028 KIAA0825Q8IV33 1275 aa6.33□□□□□ -1.4
RFC4-213ENST00000489028 SLFN12Q8IYM2 578 aa6.33□□□□□ -1.4
RFC4-213ENST00000489028 CYB5D2Q8WUJ1 264 aa6.33□□□□□ -1.4
RFC4-213ENST00000489028 SPON2Q9BUD6 331 aa6.33□□□□□ -1.4
RFC4-213ENST00000489028 NT5C1AQ9BXI3 368 aa6.33□□□□□ -1.4
RFC4-213ENST00000489028 DDX41Q9UJV9 622 aaKnown RBP6.33□□□□□ -1.4
RFC4-213ENST00000489028 CAPN6Q9Y6Q1 641 aa6.33□□□□□ -1.4
RFC4-213ENST00000489028 COL17A1Q9UMD9 1497 aaPredicted RBP6.33□□□□□ -1.4
RFC4-213ENST00000489028 TMEM265A0A087WTH1 108 aa6.32□□□□□ -1.4
RFC4-213ENST00000489028 ATE1O95260 518 aa6.32□□□□□ -1.4
RFC4-213ENST00000489028 CBX7O95931 251 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms