RNA–Protein interactions for RNA: ENST00000488836.3

RN7SL28P-201, Transcript of RNA, 7SL, cytoplasmic 28, pseudogene, humanhuman

BASIC

Gene RN7SL28P, Length 298 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL28P-201ENST00000488836 C11orf49Q9H6J7 331 aa10.47□□□□□ -0.73
RN7SL28P-201ENST00000488836 GPR108Q9NPR9 543 aa10.47□□□□□ -0.73
RN7SL28P-201ENST00000488836 STAP2Q9UGK3 403 aa10.47□□□□□ -0.73
RN7SL28P-201ENST00000488836 GJD2Q9UKL4 321 aa10.47□□□□□ -0.73
RN7SL28P-201ENST00000488836 LAMA3Q16787 3333 aa10.46□□□□□ -0.73
RN7SL28P-201ENST00000488836 USP17L10C9JJH3 530 aa10.46□□□□□ -0.73
RN7SL28P-201ENST00000488836 HLA-DOAP06340 250 aa10.46□□□□□ -0.73
RN7SL28P-201ENST00000488836 PPP4CP60510 307 aa10.46□□□□□ -0.73
RN7SL28P-201ENST00000488836 MTMR2Q13614 643 aa10.46□□□□□ -0.73
RN7SL28P-201ENST00000488836 TTC39AQ5SRH9 613 aa10.46□□□□□ -0.73
RN7SL28P-201ENST00000488836 TMED8Q6PL24 325 aaPredicted RBP10.46□□□□□ -0.73
RN7SL28P-201ENST00000488836 TBC1D9Q6ZT07 1266 aa10.46□□□□□ -0.73
RN7SL28P-201ENST00000488836 C7orf61Q8IZ16 206 aa10.46□□□□□ -0.73
RN7SL28P-201ENST00000488836 SLC17A8Q8NDX2 589 aa10.46□□□□□ -0.73
RN7SL28P-201ENST00000488836 GDF15Q99988 308 aa10.46□□□□□ -0.73
RN7SL28P-201ENST00000488836 CWC22Q9HCG8 908 aaKnown RBP10.46□□□□□ -0.73
RN7SL28P-201ENST00000488836 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.46□□□□□ -0.73
RN7SL28P-201ENST00000488836 OGDHLQ9ULD0 1010 aa10.46□□□□□ -0.73
RN7SL28P-201ENST00000488836 MAST2Q6P0Q8 1798 aa10.46□□□□□ -0.74
RN7SL28P-201ENST00000488836 DOCK3Q8IZD9 2030 aa10.46□□□□□ -0.74
RN7SL28P-201ENST00000488836 GLRX3O76003 335 aaKnown RBP10.45□□□□□ -0.74
RN7SL28P-201ENST00000488836 SLURP2P0DP57 97 aa10.45□□□□□ -0.74
RN7SL28P-201ENST00000488836 PRKAR2AP13861 404 aaKnown RBP10.45□□□□□ -0.74
RN7SL28P-201ENST00000488836 ZKSCAN1P17029 563 aaPredicted RBP10.45□□□□□ -0.74
RN7SL28P-201ENST00000488836 RGS2P41220 211 aa10.45□□□□□ -0.74
RN7SL28P-201ENST00000488836 MCAMP43121 646 aa10.45□□□□□ -0.74
RN7SL28P-201ENST00000488836 HERVK_113P62684 666 aa10.45□□□□□ -0.74
RN7SL28P-201ENST00000488836 PI16Q6UXB8 463 aa10.45□□□□□ -0.74
RN7SL28P-201ENST00000488836 METTL16Q86W50 562 aaKnown RBP10.45□□□□□ -0.74
RN7SL28P-201ENST00000488836 SH3RF3Q8TEJ3 882 aaPredicted RBP10.45□□□□□ -0.74
RN7SL28P-201ENST00000488836 ZNF512BQ96KM6 892 aaPredicted RBP10.45□□□□□ -0.74
RN7SL28P-201ENST00000488836 AATFQ9NY61 560 aaKnown RBP eCLIP10.45□□□□□ -0.74
RN7SL28P-201ENST00000488836 COL6A3P12111 3177 aa10.44□□□□□ -0.74
RN7SL28P-201ENST00000488836 FLT1P17948 1338 aa10.44□□□□□ -0.74
RN7SL28P-201ENST00000488836 CYP2B6P20813 491 aa10.44□□□□□ -0.74
RN7SL28P-201ENST00000488836 CCNA1P78396 465 aa10.44□□□□□ -0.74
RN7SL28P-201ENST00000488836 OS9Q13438 667 aaPredicted RBP10.44□□□□□ -0.74
RN7SL28P-201ENST00000488836 LRIT3Q3SXY7 679 aa10.44□□□□□ -0.74
RN7SL28P-201ENST00000488836 MAP3K21Q5TCX8 1036 aa10.44□□□□□ -0.74
RN7SL28P-201ENST00000488836 DIS3LQ8TF46 1054 aaKnown RBP10.44□□□□□ -0.74
RN7SL28P-201ENST00000488836 TGFBRAP1Q8WUH2 860 aa10.44□□□□□ -0.74
RN7SL28P-201ENST00000488836 TRIB2Q92519 343 aa10.44□□□□□ -0.74
RN7SL28P-201ENST00000488836 P2RX7Q99572 595 aaKnown RBP10.44□□□□□ -0.74
RN7SL28P-201ENST00000488836 DLL1O00548 723 aa10.43□□□□□ -0.74
RN7SL28P-201ENST00000488836 TRIM27P14373 513 aa10.43□□□□□ -0.74
RN7SL28P-201ENST00000488836 USP14P54578 494 aa10.43□□□□□ -0.74
RN7SL28P-201ENST00000488836 ERVK-9P63128 1117 aa10.43□□□□□ -0.74
RN7SL28P-201ENST00000488836 ERVK-24P63145 666 aa10.43□□□□□ -0.74
RN7SL28P-201ENST00000488836 TNNI3KQ59H18 835 aa10.43□□□□□ -0.74
RN7SL28P-201ENST00000488836 USP17L2Q6R6M4 530 aa10.43□□□□□ -0.74
RN7SL28P-201ENST00000488836 MAPKAPK5Q8IW41 473 aa10.43□□□□□ -0.74
RN7SL28P-201ENST00000488836 TDHQ8IZJ6 230 aa10.43□□□□□ -0.74
RN7SL28P-201ENST00000488836 ZBTB21Q9ULJ3 1066 aa10.43□□□□□ -0.74
RN7SL28P-201ENST00000488836 FPGT-TNNI3KV9GXZ4 949 aa10.43□□□□□ -0.74
RN7SL28P-201ENST00000488836 DDX60LQ5H9U9 1706 aaKnown RBP10.43□□□□□ -0.74
RN7SL28P-201ENST00000488836 ALPK3Q96L96 1907 aa10.43□□□□□ -0.74
RN7SL28P-201ENST00000488836 FOCADQ5VW36 1801 aa10.42□□□□□ -0.74
RN7SL28P-201ENST00000488836 PNMA6EA0A0J9YXQ4 647 aa10.42□□□□□ -0.74
RN7SL28P-201ENST00000488836 SOX1O00570 391 aaPredicted RBP10.42□□□□□ -0.74
RN7SL28P-201ENST00000488836 MSCO60682 206 aa10.42□□□□□ -0.74
RN7SL28P-201ENST00000488836 MNX1P50219 401 aaPredicted RBP10.42□□□□□ -0.74
RN7SL28P-201ENST00000488836 RRP1BQ14684 758 aaKnown RBP10.42□□□□□ -0.74
RN7SL28P-201ENST00000488836 GPR142Q7Z601 462 aa10.42□□□□□ -0.74
RN7SL28P-201ENST00000488836 PLEKHH3Q7Z736 793 aa10.42□□□□□ -0.74
RN7SL28P-201ENST00000488836 FRAT1Q92837 279 aaPredicted RBP10.42□□□□□ -0.74
RN7SL28P-201ENST00000488836 LRCH3Q96II8 777 aa10.42□□□□□ -0.74
RN7SL28P-201ENST00000488836 FEZ1Q99689 392 aa10.42□□□□□ -0.74
RN7SL28P-201ENST00000488836 APBA2Q99767 749 aa10.42□□□□□ -0.74
RN7SL28P-201ENST00000488836 UBE2OQ9C0C9 1292 aaKnown RBP10.42□□□□□ -0.74
RN7SL28P-201ENST00000488836 RBPJLQ9UBG7 517 aa10.42□□□□□ -0.74
RN7SL28P-201ENST00000488836 PALD1Q9ULE6 856 aa10.42□□□□□ -0.74
RN7SL28P-201ENST00000488836 ZMYND8Q9ULU4 1186 aaPredicted RBP10.42□□□□□ -0.74
RN7SL28P-201ENST00000488836 RABGAP1Q9Y3P9 1069 aa10.42□□□□□ -0.74
RN7SL28P-201ENST00000488836 USP17L15C9J2P7 530 aa10.41□□□□□ -0.74
RN7SL28P-201ENST00000488836 USP17L13C9JLJ4 530 aa10.41□□□□□ -0.74
RN7SL28P-201ENST00000488836 USP17L11C9JVI0 530 aa10.41□□□□□ -0.74
RN7SL28P-201ENST00000488836 USP17L18D6R9N7 530 aa10.41□□□□□ -0.74
RN7SL28P-201ENST00000488836 USP17L22D6RA61 530 aa10.41□□□□□ -0.74
RN7SL28P-201ENST00000488836 USP17L17D6RBQ6 530 aa10.41□□□□□ -0.74
RN7SL28P-201ENST00000488836 USP17L19D6RCP7 530 aa10.41□□□□□ -0.74
RN7SL28P-201ENST00000488836 USP17L20D6RJB6 530 aa10.41□□□□□ -0.74
RN7SL28P-201ENST00000488836 GDF11O95390 407 aa10.41□□□□□ -0.74
RN7SL28P-201ENST00000488836 CYP2E1P05181 493 aaPredicted RBP10.41□□□□□ -0.74
RN7SL28P-201ENST00000488836 MAGEA10P43363 369 aaPredicted RBP10.41□□□□□ -0.74
RN7SL28P-201ENST00000488836 USP5P45974 858 aa10.41□□□□□ -0.74
RN7SL28P-201ENST00000488836 USP17L24Q0WX57 530 aa10.41□□□□□ -0.74
RN7SL28P-201ENST00000488836 TRIM32Q13049 653 aa10.41□□□□□ -0.74
RN7SL28P-201ENST00000488836 MFSD14CQ5VZR4 134 aa10.41□□□□□ -0.74
RN7SL28P-201ENST00000488836 TTC6Q86TZ1 520 aa10.41□□□□□ -0.74
RN7SL28P-201ENST00000488836 DEFB123Q8N688 67 aa10.41□□□□□ -0.74
RN7SL28P-201ENST00000488836 USP6NLQ92738 828 aa10.41□□□□□ -0.74
RN7SL28P-201ENST00000488836 C12orf42Q96LP6 360 aa10.41□□□□□ -0.74
RN7SL28P-201ENST00000488836 PAGR1Q9BTK6 254 aa10.41□□□□□ -0.74
RN7SL28P-201ENST00000488836 EHD4Q9H223 541 aa10.41□□□□□ -0.74
RN7SL28P-201ENST00000488836 DNAJC18Q9H819 358 aa10.41□□□□□ -0.74
RN7SL28P-201ENST00000488836 TXNRD2Q9NNW7 524 aa10.41□□□□□ -0.74
RN7SL28P-201ENST00000488836 SNRKQ9NRH2 765 aa10.41□□□□□ -0.74
RN7SL28P-201ENST00000488836 SERPINB13Q9UIV8 391 aa10.41□□□□□ -0.74
RN7SL28P-201ENST00000488836 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.41□□□□□ -0.74
RN7SL28P-201ENST00000488836 IVNS1ABPQ9Y6Y0 642 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms