RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 ZBTB21Q9ULJ3 1066 aa19.21■□□□□ 0.67
CTDSP1-209ENST00000488627 SMIM22K7EJ46 135 aa19.2■□□□□ 0.66
CTDSP1-209ENST00000488627 C17orf99Q6UX52 265 aa19.2■□□□□ 0.66
CTDSP1-209ENST00000488627 SLC4A4Q9Y6R1 1079 aa19.2■□□□□ 0.66
CTDSP1-209ENST00000488627 ADGRA2Q96PE1 1338 aa19.2■□□□□ 0.66
CTDSP1-209ENST00000488627 FOCADQ5VW36 1801 aa19.19■□□□□ 0.66
CTDSP1-209ENST00000488627 USP17L12C9JPN9 530 aa19.19■□□□□ 0.66
CTDSP1-209ENST00000488627 USP17L21D6R901 530 aa19.19■□□□□ 0.66
CTDSP1-209ENST00000488627 SH3D19Q5HYK7 790 aa19.19■□□□□ 0.66
CTDSP1-209ENST00000488627 C12orf60Q5U649 245 aa19.19■□□□□ 0.66
CTDSP1-209ENST00000488627 GADL1Q6ZQY3 521 aa19.19■□□□□ 0.66
CTDSP1-209ENST00000488627 SLC45A1Q9Y2W3 748 aa19.19■□□□□ 0.66
CTDSP1-209ENST00000488627 CDK5RAP2Q96SN8 1893 aa19.19■□□□□ 0.66
CTDSP1-209ENST00000488627 CYP2D7A0A087X1C5 515 aa19.18■□□□□ 0.66
CTDSP1-209ENST00000488627 GSG1L2A8MUP6 293 aa19.18■□□□□ 0.66
CTDSP1-209ENST00000488627 M0R2C6 588 aa19.18■□□□□ 0.66
CTDSP1-209ENST00000488627 GH2P01242 217 aa19.18■□□□□ 0.66
CTDSP1-209ENST00000488627 BACE1P56817 501 aa19.18■□□□□ 0.66
CTDSP1-209ENST00000488627 PKN2Q16513 984 aaKnown RBP19.18■□□□□ 0.66
CTDSP1-209ENST00000488627 CERKLQ49MI3 558 aaPredicted RBP19.18■□□□□ 0.66
CTDSP1-209ENST00000488627 ZMYM1Q5SVZ6 1142 aa19.18■□□□□ 0.66
CTDSP1-209ENST00000488627 CTR9Q6PD62 1173 aa19.18■□□□□ 0.66
CTDSP1-209ENST00000488627 PLEKHM2Q8IWE5 1019 aa19.18■□□□□ 0.66
CTDSP1-209ENST00000488627 CD99L2Q8TCZ2 262 aa19.18■□□□□ 0.66
CTDSP1-209ENST00000488627 DYNLL2Q96FJ2 89 aa19.18■□□□□ 0.66
CTDSP1-209ENST00000488627 ERO1AQ96HE7 468 aa19.18■□□□□ 0.66
CTDSP1-209ENST00000488627 AS3MTQ9HBK9 375 aa19.18■□□□□ 0.66
CTDSP1-209ENST00000488627 AGTPBP1Q9UPW5 1226 aa19.18■□□□□ 0.66
CTDSP1-209ENST00000488627 GPAA1O43292 621 aa19.17■□□□□ 0.66
CTDSP1-209ENST00000488627 CAPN15O75808 1086 aa19.17■□□□□ 0.66
CTDSP1-209ENST00000488627 CYP2C8P10632 490 aa19.17■□□□□ 0.66
CTDSP1-209ENST00000488627 GUCY1A2P33402 732 aa19.17■□□□□ 0.66
CTDSP1-209ENST00000488627 HMGCS2P54868 508 aa19.17■□□□□ 0.66
CTDSP1-209ENST00000488627 LRRFIP1Q32MZ4 808 aaKnown RBP19.17■□□□□ 0.66
CTDSP1-209ENST00000488627 TREML2Q5T2D2 321 aa19.17■□□□□ 0.66
CTDSP1-209ENST00000488627 OTOP1Q7RTM1 612 aa19.17■□□□□ 0.66
CTDSP1-209ENST00000488627 PROCA1Q8NCQ7 364 aaPredicted RBP19.17■□□□□ 0.66
CTDSP1-209ENST00000488627 SLC44A5Q8NCS7 719 aa19.17■□□□□ 0.66
CTDSP1-209ENST00000488627 EVI5LQ96CN4 794 aa19.17■□□□□ 0.66
CTDSP1-209ENST00000488627 SEC62Q99442 399 aaKnown RBP19.17■□□□□ 0.66
CTDSP1-209ENST00000488627 FSD1Q9BTV5 496 aa19.17■□□□□ 0.66
CTDSP1-209ENST00000488627 CPA4Q9UI42 421 aa19.17■□□□□ 0.66
CTDSP1-209ENST00000488627 TAOK2Q9UL54 1235 aa19.17■□□□□ 0.66
CTDSP1-209ENST00000488627 ABCB5Q2M3G0 1257 aa19.16■□□□□ 0.66
CTDSP1-209ENST00000488627 GIMAP6Q6P9H5 292 aa19.16■□□□□ 0.66
CTDSP1-209ENST00000488627 PARK7Q99497 189 aaKnown RBP19.16■□□□□ 0.66
CTDSP1-209ENST00000488627 OSBPL3Q9H4L5 887 aa19.16■□□□□ 0.66
CTDSP1-209ENST00000488627 DOCK1Q14185 1865 aa19.16■□□□□ 0.66
CTDSP1-209ENST00000488627 DDX60LQ5H9U9 1706 aaKnown RBP19.15■□□□□ 0.66
CTDSP1-209ENST00000488627 USP17L10C9JJH3 530 aa19.15■□□□□ 0.66
CTDSP1-209ENST00000488627 BCRP11274 1271 aa19.15■□□□□ 0.66
CTDSP1-209ENST00000488627 MTMR2Q13614 643 aa19.15■□□□□ 0.66
CTDSP1-209ENST00000488627 SBK1Q52WX2 424 aa19.15■□□□□ 0.66
CTDSP1-209ENST00000488627 EPB41L4AQ9HCS5 686 aaPredicted RBP19.15■□□□□ 0.66
CTDSP1-209ENST00000488627 TRIM17Q9Y577 477 aa19.15■□□□□ 0.66
CTDSP1-209ENST00000488627 C19orf81C9J6K1 198 aa19.14■□□□□ 0.65
CTDSP1-209ENST00000488627 CDK8P49336 464 aa19.14■□□□□ 0.65
CTDSP1-209ENST00000488627 LACTBP83111 547 aaPredicted RBP19.14■□□□□ 0.65
CTDSP1-209ENST00000488627 FBXO46Q6PJ61 603 aaPredicted RBP19.14■□□□□ 0.65
CTDSP1-209ENST00000488627 C16orf86Q6ZW13 317 aa19.14■□□□□ 0.65
CTDSP1-209ENST00000488627 ARHGAP39Q9C0H5 1083 aa19.14■□□□□ 0.65
CTDSP1-209ENST00000488627 SWAP70Q9UH65 585 aa19.14■□□□□ 0.65
CTDSP1-209ENST00000488627 PHIPQ8WWQ0 1821 aa19.14■□□□□ 0.65
CTDSP1-209ENST00000488627 PATL2C9JE40 543 aaKnown RBP19.13■□□□□ 0.65
CTDSP1-209ENST00000488627 GNAT2P19087 354 aa19.13■□□□□ 0.65
CTDSP1-209ENST00000488627 CTGFP29279 349 aa19.13■□□□□ 0.65
CTDSP1-209ENST00000488627 ACER1Q8TDN7 264 aa19.13■□□□□ 0.65
CTDSP1-209ENST00000488627 DDRGK1Q96HY6 314 aa19.13■□□□□ 0.65
CTDSP1-209ENST00000488627 EFCC1Q9HA90 598 aa19.13■□□□□ 0.65
CTDSP1-209ENST00000488627 CABP5Q9NP86 173 aa19.13■□□□□ 0.65
CTDSP1-209ENST00000488627 EMILIN3Q9NT22 766 aa19.13■□□□□ 0.65
CTDSP1-209ENST00000488627 HPS5Q9UPZ3 1129 aa19.13■□□□□ 0.65
CTDSP1-209ENST00000488627 MYH1P12882 1939 aa19.12■□□□□ 0.65
CTDSP1-209ENST00000488627 FOXP2O15409 715 aa19.12■□□□□ 0.65
CTDSP1-209ENST00000488627 HOXA7P31268 230 aaPredicted RBP19.12■□□□□ 0.65
CTDSP1-209ENST00000488627 SEPT2Q15019 361 aa19.12■□□□□ 0.65
CTDSP1-209ENST00000488627 RAB3GAP1Q15042 981 aa19.12■□□□□ 0.65
CTDSP1-209ENST00000488627 TICAM2Q86XR7 235 aa19.12■□□□□ 0.65
CTDSP1-209ENST00000488627 ARPP21Q9UBL0 812 aaPredicted RBP19.12■□□□□ 0.65
CTDSP1-209ENST00000488627 PTPN22Q9Y2R2 807 aa19.12■□□□□ 0.65
CTDSP1-209ENST00000488627 CCDC85CA6NKD9 419 aa19.11■□□□□ 0.65
CTDSP1-209ENST00000488627 PDE4AP27815 886 aa19.11■□□□□ 0.65
CTDSP1-209ENST00000488627 SIAH1Q8IUQ4 282 aa19.11■□□□□ 0.65
CTDSP1-209ENST00000488627 IFNL3Q8IZI9 196 aa19.11■□□□□ 0.65
CTDSP1-209ENST00000488627 C12orf42Q96LP6 360 aa19.11■□□□□ 0.65
CTDSP1-209ENST00000488627 KIAA1683Q9H0B3 1180 aa19.11■□□□□ 0.65
CTDSP1-209ENST00000488627 ASCC2Q9H1I8 757 aaPredicted RBP19.11■□□□□ 0.65
CTDSP1-209ENST00000488627 A0A1W2PRG0 241 aa19.1■□□□□ 0.65
CTDSP1-209ENST00000488627 AKR1B1P15121 316 aa19.1■□□□□ 0.65
CTDSP1-209ENST00000488627 USP17L2Q6R6M4 530 aa19.1■□□□□ 0.65
CTDSP1-209ENST00000488627 CCDC129Q6ZRS4 1044 aa19.1■□□□□ 0.65
CTDSP1-209ENST00000488627 AMOTL1Q8IY63 956 aa19.1■□□□□ 0.65
CTDSP1-209ENST00000488627 CCDC17Q96LX7 622 aa19.1■□□□□ 0.65
CTDSP1-209ENST00000488627 TMOD4Q9NZQ9 345 aa19.1■□□□□ 0.65
CTDSP1-209ENST00000488627 PABPC4Q13310 644 aaKnown RBP eCLIP19.09■□□□□ 0.65
CTDSP1-209ENST00000488627 TMEM179Q6ZVK1 233 aa19.09■□□□□ 0.65
CTDSP1-209ENST00000488627 SMCR8Q8TEV9 937 aaPredicted RBP19.09■□□□□ 0.65
CTDSP1-209ENST00000488627 TRIM47Q96LD4 638 aa19.09■□□□□ 0.65
CTDSP1-209ENST00000488627 FAM227BQ96M60 508 aa19.09■□□□□ 0.65
CTDSP1-209ENST00000488627 HELLSQ9NRZ9 838 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms