RNA–Protein interactions for RNA: ENST00000488601.6

POLR1C-208, Transcript of RNA polymerase I and III subunit C, humanhuman

TSL 2

Gene POLR1C, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1C-208ENST00000488601 APOBEC3FQ8IUX4 373 aaKnown RBP8.6□□□□□ -1.03
POLR1C-208ENST00000488601 LRRN4Q8WUT4 740 aa8.6□□□□□ -1.03
POLR1C-208ENST00000488601 TRIM43Q96BQ3 446 aaPredicted RBP8.6□□□□□ -1.03
POLR1C-208ENST00000488601 STAC3Q96MF2 364 aa8.6□□□□□ -1.03
POLR1C-208ENST00000488601 LOC400499M0QZD8 3231 aa8.6□□□□□ -1.03
POLR1C-208ENST00000488601 EDC4Q6P2E9 1401 aaKnown RBP8.6□□□□□ -1.03
POLR1C-208ENST00000488601 FRYLO94915 3013 aa8.6□□□□□ -1.03
POLR1C-208ENST00000488601 CNOT1A5YKK6 2376 aaKnown RBP8.59□□□□□ -1.03
POLR1C-208ENST00000488601 SH3TC1Q8TE82 1336 aa8.59□□□□□ -1.03
POLR1C-208ENST00000488601 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.59□□□□□ -1.03
POLR1C-208ENST00000488601 FAM177BA6PVY3 158 aa8.59□□□□□ -1.03
POLR1C-208ENST00000488601 PROS1P07225 676 aa8.59□□□□□ -1.03
POLR1C-208ENST00000488601 CETPP11597 493 aa8.59□□□□□ -1.03
POLR1C-208ENST00000488601 ATXN1P54253 815 aaKnown RBP8.59□□□□□ -1.03
POLR1C-208ENST00000488601 RING1Q06587 406 aa8.59□□□□□ -1.03
POLR1C-208ENST00000488601 WASHC4Q2M389 1173 aa8.59□□□□□ -1.03
POLR1C-208ENST00000488601 SOWAHCQ53LP3 525 aaPredicted RBP8.59□□□□□ -1.03
POLR1C-208ENST00000488601 GLMNQ92990 594 aa8.59□□□□□ -1.03
POLR1C-208ENST00000488601 FAM163AQ96GL9 167 aaPredicted RBP8.59□□□□□ -1.03
POLR1C-208ENST00000488601 COG3Q96JB2 828 aa8.59□□□□□ -1.03
POLR1C-208ENST00000488601 ZFRQ96KR1 1074 aaKnown RBP8.59□□□□□ -1.03
POLR1C-208ENST00000488601 CALR3Q96L12 384 aaKnown RBP8.59□□□□□ -1.03
POLR1C-208ENST00000488601 TRIM34Q9BYJ4 488 aa8.59□□□□□ -1.03
POLR1C-208ENST00000488601 NKX2-4Q9H2Z4 354 aa8.59□□□□□ -1.03
POLR1C-208ENST00000488601 NIP7Q9Y221 180 aaKnown RBP eCLIP8.59□□□□□ -1.03
POLR1C-208ENST00000488601 COL4A4P53420 1690 aaPredicted RBP8.59□□□□□ -1.03
POLR1C-208ENST00000488601 BCRP11274 1271 aa8.58□□□□□ -1.04
POLR1C-208ENST00000488601 SDHBP21912 280 aa8.58□□□□□ -1.04
POLR1C-208ENST00000488601 ZP2Q05996 745 aa8.58□□□□□ -1.04
POLR1C-208ENST00000488601 EPHA10Q5JZY3 1008 aa8.58□□□□□ -1.04
POLR1C-208ENST00000488601 RASIP1Q5U651 963 aa8.58□□□□□ -1.04
POLR1C-208ENST00000488601 PTCRAQ6ISU1 281 aaPredicted RBP8.58□□□□□ -1.04
POLR1C-208ENST00000488601 PDLIM7Q9NR12 457 aa8.58□□□□□ -1.04
POLR1C-208ENST00000488601 MUTYHQ9UIF7 546 aa8.58□□□□□ -1.04
POLR1C-208ENST00000488601 KCNH4Q9UQ05 1017 aa8.58□□□□□ -1.04
POLR1C-208ENST00000488601 ATP11BQ9Y2G3 1177 aa8.58□□□□□ -1.04
POLR1C-208ENST00000488601 ABCC12Q96J65 1359 aa8.58□□□□□ -1.04
POLR1C-208ENST00000488601 BRWD1Q9NSI6 2320 aa8.58□□□□□ -1.04
POLR1C-208ENST00000488601 MGAMO43451 1857 aa8.57□□□□□ -1.04
POLR1C-208ENST00000488601 ST20-MTHFSA0A0A6YYL1 179 aa8.57□□□□□ -1.04
POLR1C-208ENST00000488601 MTHFSP49914 203 aa8.57□□□□□ -1.04
POLR1C-208ENST00000488601 TRIM32Q13049 653 aa8.57□□□□□ -1.04
POLR1C-208ENST00000488601 KMT5BQ4FZB7 885 aa8.57□□□□□ -1.04
POLR1C-208ENST00000488601 SH3RF1Q7Z6J0 888 aa8.57□□□□□ -1.04
POLR1C-208ENST00000488601 DZIP3Q86Y13 1208 aaKnown RBP8.57□□□□□ -1.04
POLR1C-208ENST00000488601 CRACR2BQ8N4Y2 399 aaPredicted RBP8.57□□□□□ -1.04
POLR1C-208ENST00000488601 DCAF11Q8TEB1 546 aa8.57□□□□□ -1.04
POLR1C-208ENST00000488601 PRKAG3Q9UGI9 489 aa8.57□□□□□ -1.04
POLR1C-208ENST00000488601 ZMIZ1Q9ULJ6 1067 aa8.57□□□□□ -1.04
POLR1C-208ENST00000488601 ZNF652Q9Y2D9 606 aa8.57□□□□□ -1.04
POLR1C-208ENST00000488601 BBOX1O75936 387 aa8.56□□□□□ -1.04
POLR1C-208ENST00000488601 PUS10Q3MIT2 529 aaKnown RBP8.56□□□□□ -1.04
POLR1C-208ENST00000488601 LARP1BQ659C4 914 aaKnown RBP8.56□□□□□ -1.04
POLR1C-208ENST00000488601 KRT40Q6A162 431 aa8.56□□□□□ -1.04
POLR1C-208ENST00000488601 NPM2Q86SE8 214 aaKnown RBP8.56□□□□□ -1.04
POLR1C-208ENST00000488601 MRPL50Q8N5N7 158 aaKnown RBP8.56□□□□□ -1.04
POLR1C-208ENST00000488601 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.56□□□□□ -1.04
POLR1C-208ENST00000488601 PRR7Q8TB68 274 aa8.56□□□□□ -1.04
POLR1C-208ENST00000488601 EPS8L1Q8TE68 723 aa8.56□□□□□ -1.04
POLR1C-208ENST00000488601 DEFB129Q9H1M3 183 aa8.56□□□□□ -1.04
POLR1C-208ENST00000488601 UBE2ZQ9H832 354 aaPredicted RBP8.56□□□□□ -1.04
POLR1C-208ENST00000488601 YBX2Q9Y2T7 364 aaKnown RBP8.56□□□□□ -1.04
POLR1C-208ENST00000488601 HECTD1Q9ULT8 2610 aa8.56□□□□□ -1.04
POLR1C-208ENST00000488601 DUOX1Q9NRD9 1551 aa8.56□□□□□ -1.04
POLR1C-208ENST00000488601 TK2O00142 265 aa8.55□□□□□ -1.04
POLR1C-208ENST00000488601 TNPO2O14787 897 aaKnown RBP8.55□□□□□ -1.04
POLR1C-208ENST00000488601 FPGSQ05932 587 aa8.55□□□□□ -1.04
POLR1C-208ENST00000488601 SUPT20HL1Q3ZLR7 823 aa8.55□□□□□ -1.04
POLR1C-208ENST00000488601 MAP3K21Q5TCX8 1036 aa8.55□□□□□ -1.04
POLR1C-208ENST00000488601 ADAM32Q8TC27 787 aa8.55□□□□□ -1.04
POLR1C-208ENST00000488601 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.55□□□□□ -1.045e-7■■■■□ 26
POLR1C-208ENST00000488601 SRPK3Q9UPE1 567 aa8.55□□□□□ -1.04
POLR1C-208ENST00000488601 RFXAPO00287 272 aa8.54□□□□□ -1.04
POLR1C-208ENST00000488601 MORN1Q5T089 497 aa8.54□□□□□ -1.04
POLR1C-208ENST00000488601 HS3ST6Q96QI5 342 aa8.54□□□□□ -1.04
POLR1C-208ENST00000488601 ANGPTL2Q9UKU9 493 aa8.54□□□□□ -1.04
POLR1C-208ENST00000488601 ITPR3Q14573 2671 aa8.54□□□□□ -1.04
POLR1C-208ENST00000488601 FBN3Q75N90 2809 aa8.53□□□□□ -1.04
POLR1C-208ENST00000488601 ACTN4O43707 911 aaKnown RBP8.53□□□□□ -1.04
POLR1C-208ENST00000488601 VAC14Q08AM6 782 aa8.53□□□□□ -1.04
POLR1C-208ENST00000488601 SLC39A6Q13433 755 aa8.53□□□□□ -1.04
POLR1C-208ENST00000488601 HDGFL1Q5TGJ6 251 aa8.53□□□□□ -1.04
POLR1C-208ENST00000488601 FAM117BQ6P1L5 589 aa8.53□□□□□ -1.04
POLR1C-208ENST00000488601 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.53□□□□□ -1.04
POLR1C-208ENST00000488601 HDGFL2Q7Z4V5 671 aaPredicted RBP8.53□□□□□ -1.04
POLR1C-208ENST00000488601 NYXQ9GZU5 481 aa8.53□□□□□ -1.04
POLR1C-208ENST00000488601 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.53□□□□□ -1.04
POLR1C-208ENST00000488601 SLC27A5Q9Y2P5 690 aa8.53□□□□□ -1.04
POLR1C-208ENST00000488601 SCN9AQ15858 1988 aa8.53□□□□□ -1.04
POLR1C-208ENST00000488601 TEX15Q9BXT5 2789 aa8.53□□□□□ -1.04
POLR1C-208ENST00000488601 TENM4Q6N022 2769 aa8.52□□□□□ -1.05
POLR1C-208ENST00000488601 PER1O15534 1290 aaPredicted RBP8.52□□□□□ -1.05
POLR1C-208ENST00000488601 NR6A1Q15406 480 aa8.52□□□□□ -1.05
POLR1C-208ENST00000488601 ADGRD1Q6QNK2 874 aa8.52□□□□□ -1.05
POLR1C-208ENST00000488601 SLC39A5Q6ZMH5 540 aa8.52□□□□□ -1.05
POLR1C-208ENST00000488601 ANKRD23Q86SG2 305 aa8.52□□□□□ -1.05
POLR1C-208ENST00000488601 RETREG3Q86VR2 466 aa8.52□□□□□ -1.05
POLR1C-208ENST00000488601 ADHFE1Q8IWW8 467 aa8.52□□□□□ -1.05
POLR1C-208ENST00000488601 CACNA2D2Q9NY47 1150 aa8.52□□□□□ -1.05
POLR1C-208ENST00000488601 PPP2R3BQ9Y5P8 575 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms