RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 DDX60LQ5H9U9 1706 aaKnown RBP18.03■□□□□ 0.48
CXCL12-207ENST00000488591 HIP1O00291 1037 aa18.02■□□□□ 0.48
CXCL12-207ENST00000488591 GDF11O95390 407 aa18.02■□□□□ 0.48
CXCL12-207ENST00000488591 CYP2D6P10635 497 aa18.02■□□□□ 0.48
CXCL12-207ENST00000488591 TDO2P48775 406 aa18.02■□□□□ 0.48
CXCL12-207ENST00000488591 RRP1BQ14684 758 aaKnown RBP18.02■□□□□ 0.48
CXCL12-207ENST00000488591 MCMDC2Q4G0Z9 681 aa18.02■□□□□ 0.48
CXCL12-207ENST00000488591 CTR9Q6PD62 1173 aa18.02■□□□□ 0.48
CXCL12-207ENST00000488591 FASTKD5Q7L8L6 764 aaKnown RBP18.02■□□□□ 0.48
CXCL12-207ENST00000488591 CFHR5Q9BXR6 569 aa18.02■□□□□ 0.48
CXCL12-207ENST00000488591 ZCCHC17Q9NP64 241 aaKnown RBP18.02■□□□□ 0.48
CXCL12-207ENST00000488591 CABP5Q9NP86 173 aa18.02■□□□□ 0.48
CXCL12-207ENST00000488591 ATAD5Q96QE3 1844 aa18.02■□□□□ 0.47
CXCL12-207ENST00000488591 BAZ2AQ9UIF9 1905 aaKnown RBP18.02■□□□□ 0.47
CXCL12-207ENST00000488591 TRIM75PA6NK02 468 aa18.01■□□□□ 0.47
CXCL12-207ENST00000488591 SDSP20132 328 aa18.01■□□□□ 0.47
CXCL12-207ENST00000488591 GABPAQ06546 454 aa18.01■□□□□ 0.47
CXCL12-207ENST00000488591 ABCB5Q2M3G0 1257 aa18.01■□□□□ 0.47
CXCL12-207ENST00000488591 SBK1Q52WX2 424 aa18.01■□□□□ 0.47
CXCL12-207ENST00000488591 TTC22Q5TAA0 569 aa18.01■□□□□ 0.47
CXCL12-207ENST00000488591 ZNF280CQ8ND82 737 aa18.01■□□□□ 0.47
CXCL12-207ENST00000488591 CYP2D7A0A087X1C5 515 aa18■□□□□ 0.47
CXCL12-207ENST00000488591 GH2P01242 217 aa18■□□□□ 0.47
CXCL12-207ENST00000488591 SHMT1P34896 483 aa18■□□□□ 0.47
CXCL12-207ENST00000488591 MFAP1P55081 439 aaKnown RBP18■□□□□ 0.47
CXCL12-207ENST00000488591 SPP2Q13103 211 aa18■□□□□ 0.47
CXCL12-207ENST00000488591 IFNL3Q8IZI9 196 aa18■□□□□ 0.47
CXCL12-207ENST00000488591 FAM43AQ8N2R8 423 aa18■□□□□ 0.47
CXCL12-207ENST00000488591 ZFYVE28Q9HCC9 887 aa18■□□□□ 0.47
CXCL12-207ENST00000488591 DIAPH3Q9NSV4 1193 aa18■□□□□ 0.47
CXCL12-207ENST00000488591 FRMD4AQ9P2Q2 1039 aaPredicted RBP18■□□□□ 0.47
CXCL12-207ENST00000488591 ZBTB21Q9ULJ3 1066 aa18■□□□□ 0.47
CXCL12-207ENST00000488591 A0A0G2JLL6 359 aaPredicted RBP17.99■□□□□ 0.47
CXCL12-207ENST00000488591 MINDY4BA8MYZ0 360 aa17.99■□□□□ 0.47
CXCL12-207ENST00000488591 BTBD19C9JJ37 291 aa17.99■□□□□ 0.47
CXCL12-207ENST00000488591 NMIQ13287 307 aaPredicted RBP17.99■□□□□ 0.47
CXCL12-207ENST00000488591 TAF1CQ15572 869 aaPredicted RBP17.99■□□□□ 0.47
CXCL12-207ENST00000488591 GADL1Q6ZQY3 521 aa17.99■□□□□ 0.47
CXCL12-207ENST00000488591 CCDC129Q6ZRS4 1044 aa17.99■□□□□ 0.47
CXCL12-207ENST00000488591 PRRT2Q7Z6L0 340 aaPredicted RBP17.99■□□□□ 0.47
CXCL12-207ENST00000488591 ANKRD23Q86SG2 305 aa17.99■□□□□ 0.47
CXCL12-207ENST00000488591 CCDC84Q86UT8 332 aaPredicted RBP17.99■□□□□ 0.47
CXCL12-207ENST00000488591 DYNLL2Q96FJ2 89 aa17.99■□□□□ 0.47
CXCL12-207ENST00000488591 FAM227BQ96M60 508 aa17.99■□□□□ 0.47
CXCL12-207ENST00000488591 WDR18Q9BV38 432 aa17.99■□□□□ 0.47
CXCL12-207ENST00000488591 NAPBQ9H115 298 aa17.99■□□□□ 0.47
CXCL12-207ENST00000488591 PHIPQ8WWQ0 1821 aa17.98■□□□□ 0.47
CXCL12-207ENST00000488591 A0A0D9SFI3 127 aa17.98■□□□□ 0.47
CXCL12-207ENST00000488591 GPR25O00155 361 aa17.98■□□□□ 0.47
CXCL12-207ENST00000488591 MPHOSPH10O00566 681 aaKnown RBP17.98■□□□□ 0.47
CXCL12-207ENST00000488591 CDK8P49336 464 aa17.98■□□□□ 0.47
CXCL12-207ENST00000488591 EVX2Q03828 476 aa17.98■□□□□ 0.47
CXCL12-207ENST00000488591 RAB3GAP1Q15042 981 aa17.98■□□□□ 0.47
CXCL12-207ENST00000488591 NOM1Q5C9Z4 860 aaKnown RBP17.98■□□□□ 0.47
CXCL12-207ENST00000488591 C16orf86Q6ZW13 317 aa17.98■□□□□ 0.47
CXCL12-207ENST00000488591 CCDC17Q96LX7 622 aa17.98■□□□□ 0.47
CXCL12-207ENST00000488591 ZNF287Q9HBT7 754 aa17.98■□□□□ 0.47
CXCL12-207ENST00000488591 C19orf81C9J6K1 198 aa17.97■□□□□ 0.47
CXCL12-207ENST00000488591 PDHXO00330 501 aa17.97■□□□□ 0.47
CXCL12-207ENST00000488591 SLC3A2P08195 630 aaKnown RBP17.97■□□□□ 0.47
CXCL12-207ENST00000488591 JAG1P78504 1218 aa17.97■□□□□ 0.47
CXCL12-207ENST00000488591 CRHR2Q13324 411 aa17.97■□□□□ 0.47
CXCL12-207ENST00000488591 COL13A1Q5TAT6 717 aaPredicted RBP17.97■□□□□ 0.47
CXCL12-207ENST00000488591 ERICH6BQ5W0A0 696 aa17.97■□□□□ 0.47
CXCL12-207ENST00000488591 SLC44A5Q8NCS7 719 aa17.97■□□□□ 0.47
CXCL12-207ENST00000488591 MKNK2Q9HBH9 465 aa17.97■□□□□ 0.47
CXCL12-207ENST00000488591 EPB41L4AQ9HCS5 686 aaPredicted RBP17.97■□□□□ 0.47
CXCL12-207ENST00000488591 TMOD4Q9NZQ9 345 aa17.97■□□□□ 0.47
CXCL12-207ENST00000488591 USP17L10C9JJH3 530 aa17.96■□□□□ 0.47
CXCL12-207ENST00000488591 GSPT1P15170 499 aaKnown RBP17.96■□□□□ 0.47
CXCL12-207ENST00000488591 BACE1P56817 501 aa17.96■□□□□ 0.47
CXCL12-207ENST00000488591 MOGSQ13724 837 aa17.96■□□□□ 0.47
CXCL12-207ENST00000488591 CWC27Q6UX04 472 aaKnown RBP17.96■□□□□ 0.47
CXCL12-207ENST00000488591 TMEM179Q6ZVK1 233 aa17.96■□□□□ 0.47
CXCL12-207ENST00000488591 PROCA1Q8NCQ7 364 aaPredicted RBP17.96■□□□□ 0.47
CXCL12-207ENST00000488591 MYH8P13535 1937 aa17.96■□□□□ 0.47
CXCL12-207ENST00000488591 CCDC171Q6TFL3 1326 aa17.96■□□□□ 0.46
CXCL12-207ENST00000488591 FKTNO75072 461 aa17.95■□□□□ 0.46
CXCL12-207ENST00000488591 HMGCS2P54868 508 aa17.95■□□□□ 0.46
CXCL12-207ENST00000488591 PABPC4Q13310 644 aaKnown RBP eCLIP17.95■□□□□ 0.46
CXCL12-207ENST00000488591 MTMR2Q13614 643 aa17.95■□□□□ 0.46
CXCL12-207ENST00000488591 SHROOM1Q2M3G4 852 aaPredicted RBP17.95■□□□□ 0.46
CXCL12-207ENST00000488591 SH3D19Q5HYK7 790 aa17.95■□□□□ 0.46
CXCL12-207ENST00000488591 ZNF296Q8WUU4 475 aaPredicted RBP17.95■□□□□ 0.46
CXCL12-207ENST00000488591 FEZ1Q99689 392 aa17.95■□□□□ 0.46
CXCL12-207ENST00000488591 R3HDMLQ9H3Y0 253 aa17.95■□□□□ 0.46
CXCL12-207ENST00000488591 AGTPBP1Q9UPW5 1226 aa17.95■□□□□ 0.46
CXCL12-207ENST00000488591 SLC45A1Q9Y2W3 748 aa17.95■□□□□ 0.46
CXCL12-207ENST00000488591 CASP8AP2Q9UKL3 1982 aa17.94■□□□□ 0.46
CXCL12-207ENST00000488591 PDE4BQ07343 736 aa17.94■□□□□ 0.46
CXCL12-207ENST00000488591 SEPT2Q15019 361 aa17.94■□□□□ 0.46
CXCL12-207ENST00000488591 ALX1Q15699 326 aa17.94■□□□□ 0.46
CXCL12-207ENST00000488591 GPAT2Q6NUI2 795 aa17.94■□□□□ 0.46
CXCL12-207ENST00000488591 STK11IPQ8N1F8 1099 aa17.94■□□□□ 0.46
CXCL12-207ENST00000488591 RUFY2Q8WXA3 655 aa17.94■□□□□ 0.46
CXCL12-207ENST00000488591 PARK7Q99497 189 aaKnown RBP17.94■□□□□ 0.46
CXCL12-207ENST00000488591 ROBO3Q96MS0 1386 aa17.93■□□□□ 0.46
CXCL12-207ENST00000488591 SMIM22K7EJ46 135 aa17.93■□□□□ 0.46
CXCL12-207ENST00000488591 TLR2O60603 784 aa17.93■□□□□ 0.46
CXCL12-207ENST00000488591 HSPD1P10809 573 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms