RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 CHMP4BQ9H444 224 aaKnown RBP13.73□□□□□ -0.21
NIPAL3-207ENST00000488155 BIN2Q9UBW5 565 aaPredicted RBP13.73□□□□□ -0.21
NIPAL3-207ENST00000488155 TAOK2Q9UL54 1235 aa13.73□□□□□ -0.21
NIPAL3-207ENST00000488155 SLC45A1Q9Y2W3 748 aa13.73□□□□□ -0.21
NIPAL3-207ENST00000488155 PLXNB2O15031 1838 aa13.72□□□□□ -0.21
NIPAL3-207ENST00000488155 MAGEB6P1A0A0J9YX57 407 aa13.72□□□□□ -0.21
NIPAL3-207ENST00000488155 ASNSP08243 561 aa13.72□□□□□ -0.21
NIPAL3-207ENST00000488155 GRK4P32298 578 aa13.72□□□□□ -0.21
NIPAL3-207ENST00000488155 TTF1Q15361 905 aaPredicted RBP13.72□□□□□ -0.21
NIPAL3-207ENST00000488155 PNMA3Q9UL41 463 aa13.72□□□□□ -0.21
NIPAL3-207ENST00000488155 ZBTB21Q9ULJ3 1066 aa13.72□□□□□ -0.21
NIPAL3-207ENST00000488155 DDX60LQ5H9U9 1706 aaKnown RBP13.72□□□□□ -0.21
NIPAL3-207ENST00000488155 ZNF532Q9HCE3 1301 aa13.71□□□□□ -0.21
NIPAL3-207ENST00000488155 TNPO2O14787 897 aaKnown RBP13.71□□□□□ -0.21
NIPAL3-207ENST00000488155 PEX10O60683 326 aa13.71□□□□□ -0.21
NIPAL3-207ENST00000488155 IGSF3O75054 1194 aa13.71□□□□□ -0.21
NIPAL3-207ENST00000488155 GH2P01242 217 aa13.71□□□□□ -0.21
NIPAL3-207ENST00000488155 PLCD1P51178 756 aa13.71□□□□□ -0.21
NIPAL3-207ENST00000488155 PDE3AQ14432 1141 aa13.71□□□□□ -0.21
NIPAL3-207ENST00000488155 ZYXQ15942 572 aaKnown RBP13.71□□□□□ -0.21
NIPAL3-207ENST00000488155 METTL16Q86W50 562 aaKnown RBP13.71□□□□□ -0.21
NIPAL3-207ENST00000488155 RIOK1Q9BRS2 568 aaKnown RBP13.71□□□□□ -0.21
NIPAL3-207ENST00000488155 TBC1D2Q9BYX2 928 aa13.71□□□□□ -0.21
NIPAL3-207ENST00000488155 ASCC2Q9H1I8 757 aaPredicted RBP13.71□□□□□ -0.21
NIPAL3-207ENST00000488155 TMOD4Q9NZQ9 345 aa13.71□□□□□ -0.21
NIPAL3-207ENST00000488155 ZNFX1Q9P2E3 1918 aaKnown RBP13.7□□□□□ -0.22
NIPAL3-207ENST00000488155 USP17L10C9JJH3 530 aa13.7□□□□□ -0.22
NIPAL3-207ENST00000488155 CHGBP05060 677 aa13.7□□□□□ -0.22
NIPAL3-207ENST00000488155 POLR3DP05423 398 aaPredicted RBP13.7□□□□□ -0.22
NIPAL3-207ENST00000488155 ELNP15502 786 aa13.7□□□□□ -0.22
NIPAL3-207ENST00000488155 FLT3LGP49771 235 aa13.7□□□□□ -0.22
NIPAL3-207ENST00000488155 BACE1P56817 501 aa13.7□□□□□ -0.22
NIPAL3-207ENST00000488155 EVX2Q03828 476 aa13.7□□□□□ -0.22
NIPAL3-207ENST00000488155 PABPC4Q13310 644 aaKnown RBP eCLIP13.7□□□□□ -0.22
NIPAL3-207ENST00000488155 SH3D19Q5HYK7 790 aa13.7□□□□□ -0.22
NIPAL3-207ENST00000488155 PRPF38BQ5VTL8 546 aaKnown RBP13.7□□□□□ -0.22
NIPAL3-207ENST00000488155 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.7□□□□□ -0.22
NIPAL3-207ENST00000488155 SDR42E1Q8WUS8 393 aa13.7□□□□□ -0.22
NIPAL3-207ENST00000488155 WDR18Q9BV38 432 aa13.7□□□□□ -0.22
NIPAL3-207ENST00000488155 PAG1Q9NWQ8 432 aa13.7□□□□□ -0.22
NIPAL3-207ENST00000488155 SERPINB13Q9UIV8 391 aa13.7□□□□□ -0.22
NIPAL3-207ENST00000488155 ADCY3O60266 1144 aa13.69□□□□□ -0.22
NIPAL3-207ENST00000488155 IRX3P78415 501 aaPredicted RBP13.69□□□□□ -0.22
NIPAL3-207ENST00000488155 RAB3GAP1Q15042 981 aa13.69□□□□□ -0.22
NIPAL3-207ENST00000488155 FAM110CQ1W6H9 321 aa13.69□□□□□ -0.22
NIPAL3-207ENST00000488155 CERKLQ49MI3 558 aaPredicted RBP13.69□□□□□ -0.22
NIPAL3-207ENST00000488155 TTC6Q86TZ1 520 aa13.69□□□□□ -0.22
NIPAL3-207ENST00000488155 CERS3Q8IU89 383 aa13.69□□□□□ -0.22
NIPAL3-207ENST00000488155 LCORLQ8N3X6 602 aa13.69□□□□□ -0.22
NIPAL3-207ENST00000488155 LRRCC1Q9C099 1032 aa13.69□□□□□ -0.22
NIPAL3-207ENST00000488155 ARMT1Q9H993 441 aa13.69□□□□□ -0.22
NIPAL3-207ENST00000488155 MCM9Q9NXL9 1143 aa13.69□□□□□ -0.22
NIPAL3-207ENST00000488155 TCRBV5S4A2TA0A5A2 114 aa13.68□□□□□ -0.22
NIPAL3-207ENST00000488155 CYP2D6P10635 497 aa13.68□□□□□ -0.22
NIPAL3-207ENST00000488155 ATP5JP18859 108 aa13.68□□□□□ -0.22
NIPAL3-207ENST00000488155 COA7Q96BR5 231 aa13.68□□□□□ -0.22
NIPAL3-207ENST00000488155 P2RX7Q99572 595 aaKnown RBP13.68□□□□□ -0.22
NIPAL3-207ENST00000488155 FEZ1Q99689 392 aa13.68□□□□□ -0.22
NIPAL3-207ENST00000488155 CRNKL1Q9BZJ0 848 aaKnown RBP13.68□□□□□ -0.22
NIPAL3-207ENST00000488155 RNF208Q9H0X6 261 aa13.68□□□□□ -0.22
NIPAL3-207ENST00000488155 C19orf81C9J6K1 198 aa13.67□□□□□ -0.22
NIPAL3-207ENST00000488155 PRKAB2O43741 272 aa13.67□□□□□ -0.22
NIPAL3-207ENST00000488155 MBD4O95243 580 aa13.67□□□□□ -0.22
NIPAL3-207ENST00000488155 CCL5P13501 91 aa13.67□□□□□ -0.22
NIPAL3-207ENST00000488155 SHMT1P34896 483 aa13.67□□□□□ -0.22
NIPAL3-207ENST00000488155 ADD2P35612 726 aa13.67□□□□□ -0.22
NIPAL3-207ENST00000488155 GCLCP48506 637 aaPredicted RBP13.67□□□□□ -0.22
NIPAL3-207ENST00000488155 UBXN2AP68543 259 aa13.67□□□□□ -0.22
NIPAL3-207ENST00000488155 ABCB5Q2M3G0 1257 aa13.67□□□□□ -0.22
NIPAL3-207ENST00000488155 TATDN1Q6P1N9 297 aa13.67□□□□□ -0.22
NIPAL3-207ENST00000488155 SLAIN1Q8ND83 568 aa13.67□□□□□ -0.22
NIPAL3-207ENST00000488155 HAUS7Q99871 368 aa13.67□□□□□ -0.22
NIPAL3-207ENST00000488155 UNC93B1Q9H1C4 597 aa13.67□□□□□ -0.22
NIPAL3-207ENST00000488155 EMILIN3Q9NT22 766 aa13.67□□□□□ -0.22
NIPAL3-207ENST00000488155 GINM1Q9NU53 330 aa13.67□□□□□ -0.22
NIPAL3-207ENST00000488155 MPHOSPH10O00566 681 aaKnown RBP13.66□□□□□ -0.22
NIPAL3-207ENST00000488155 HERVK_113P62684 666 aa13.66□□□□□ -0.22
NIPAL3-207ENST00000488155 TSHZ3Q63HK5 1081 aa13.66□□□□□ -0.22
NIPAL3-207ENST00000488155 TMED8Q6PL24 325 aaPredicted RBP13.66□□□□□ -0.22
NIPAL3-207ENST00000488155 USP17L2Q6R6M4 530 aa13.66□□□□□ -0.22
NIPAL3-207ENST00000488155 SLC44A5Q8NCS7 719 aa13.66□□□□□ -0.22
NIPAL3-207ENST00000488155 ACER1Q8TDN7 264 aa13.66□□□□□ -0.22
NIPAL3-207ENST00000488155 SHISA4Q96DD7 197 aa13.66□□□□□ -0.22
NIPAL3-207ENST00000488155 YTHDC1Q96MU7 727 aaKnown RBP13.66□□□□□ -0.22
NIPAL3-207ENST00000488155 PAGR1Q9BTK6 254 aa13.66□□□□□ -0.22
NIPAL3-207ENST00000488155 EHD4Q9H223 541 aa13.66□□□□□ -0.22
NIPAL3-207ENST00000488155 TXNRD2Q9NNW7 524 aa13.66□□□□□ -0.22
NIPAL3-207ENST00000488155 CABP5Q9NP86 173 aa13.66□□□□□ -0.22
NIPAL3-207ENST00000488155 DCP1AQ9NPI6 582 aaPredicted RBP13.66□□□□□ -0.22
NIPAL3-207ENST00000488155 COL11A1P12107 1806 aaPredicted RBP13.66□□□□□ -0.22
NIPAL3-207ENST00000488155 ALPK3Q96L96 1907 aa13.66□□□□□ -0.22
NIPAL3-207ENST00000488155 MYH4Q9Y623 1939 aa13.66□□□□□ -0.22
NIPAL3-207ENST00000488155 SMIM22K7EJ46 135 aa13.65□□□□□ -0.22
NIPAL3-207ENST00000488155 INHAP05111 366 aa13.65□□□□□ -0.22
NIPAL3-207ENST00000488155 HOXA7P31268 230 aaPredicted RBP13.65□□□□□ -0.22
NIPAL3-207ENST00000488155 SEPT2Q15019 361 aa13.65□□□□□ -0.22
NIPAL3-207ENST00000488155 DYNLL2Q96FJ2 89 aa13.65□□□□□ -0.22
NIPAL3-207ENST00000488155 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.65□□□□□ -0.22
NIPAL3-207ENST00000488155 PARP14Q460N5 1801 aa13.64□□□□□ -0.23
NIPAL3-207ENST00000488155 RLFQ13129 1914 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms