RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 PRDM5Q9NQX1 630 aaPredicted RBP7.17□□□□□ -1.26
UBR3-211ENST00000487689 PRAMEF27A3QJZ7 478 aa7.16□□□□□ -1.26
UBR3-211ENST00000487689 IGF2BP3O00425 579 aaKnown RBP eCLIP7.16□□□□□ -1.26
UBR3-211ENST00000487689 LDHBP07195 334 aaKnown RBP7.16□□□□□ -1.26
UBR3-211ENST00000487689 USP17L7P0C7H9 530 aa7.16□□□□□ -1.26
UBR3-211ENST00000487689 BMP6P22004 513 aa7.16□□□□□ -1.26
UBR3-211ENST00000487689 CYFIP1Q7L576 1253 aa7.16□□□□□ -1.26
UBR3-211ENST00000487689 OSBPL7Q9BZF2 842 aa7.16□□□□□ -1.26
UBR3-211ENST00000487689 NSUN3Q9H649 340 aaKnown RBP7.16□□□□□ -1.26
UBR3-211ENST00000487689 TIMELESSQ9UNS1 1208 aa7.16□□□□□ -1.26
UBR3-211ENST00000487689 FAM155AB1AL88 458 aaPredicted RBP7.15□□□□□ -1.26
UBR3-211ENST00000487689 PAGE1O75459 146 aa7.15□□□□□ -1.26
UBR3-211ENST00000487689 EIF4BP23588 611 aaKnown RBP7.15□□□□□ -1.26
UBR3-211ENST00000487689 ZBTB37Q5TC79 503 aa7.15□□□□□ -1.26
UBR3-211ENST00000487689 SV2BQ7L1I2 683 aa7.15□□□□□ -1.26
UBR3-211ENST00000487689 SPACA3Q8IXA5 215 aa7.15□□□□□ -1.26
UBR3-211ENST00000487689 ANKRD24Q8TF21 1146 aa7.15□□□□□ -1.26
UBR3-211ENST00000487689 FOXQ1Q9C009 403 aa7.15□□□□□ -1.26
UBR3-211ENST00000487689 TPX2Q9ULW0 747 aaKnown RBP7.15□□□□□ -1.26
UBR3-211ENST00000487689 TMEM253P0C7T8 217 aa7.14□□□□□ -1.27
UBR3-211ENST00000487689 ETF1P62495 437 aaKnown RBP7.14□□□□□ -1.27
UBR3-211ENST00000487689 KCNA10Q16322 511 aa7.14□□□□□ -1.27
UBR3-211ENST00000487689 ZNF746Q6NUN9 644 aaPredicted RBP7.14□□□□□ -1.27
UBR3-211ENST00000487689 ARMCX6Q7L4S7 300 aa7.14□□□□□ -1.27
UBR3-211ENST00000487689 FAM214BQ7L5A3 538 aa7.14□□□□□ -1.27
UBR3-211ENST00000487689 KCNK12Q9HB15 430 aa7.14□□□□□ -1.27
UBR3-211ENST00000487689 WWC3Q9ULE0 1092 aa7.14□□□□□ -1.27
UBR3-211ENST00000487689 LRIG2O94898 1065 aa7.13□□□□□ -1.27
UBR3-211ENST00000487689 CELA3AP09093 270 aa7.13□□□□□ -1.27
UBR3-211ENST00000487689 CLCN7P51798 805 aa7.13□□□□□ -1.27
UBR3-211ENST00000487689 CIAPIN1Q6FI81 312 aa7.13□□□□□ -1.27
UBR3-211ENST00000487689 MPRIPQ6WCQ1 1025 aa7.13□□□□□ -1.27
UBR3-211ENST00000487689 CD320Q9NPF0 282 aa7.13□□□□□ -1.27
UBR3-211ENST00000487689 CACNA2D2Q9NY47 1150 aa7.13□□□□□ -1.27
UBR3-211ENST00000487689 MAPK8IP1Q9UQF2 711 aa7.13□□□□□ -1.27
UBR3-211ENST00000487689 PITPNM2Q9BZ72 1349 aa7.12□□□□□ -1.27
UBR3-211ENST00000487689 HOXA5P20719 270 aa7.12□□□□□ -1.27
UBR3-211ENST00000487689 CYP7A1P22680 504 aa7.12□□□□□ -1.27
UBR3-211ENST00000487689 GNA15P30679 374 aa7.12□□□□□ -1.27
UBR3-211ENST00000487689 CCDC85BQ15834 202 aaPredicted RBP7.12□□□□□ -1.27
UBR3-211ENST00000487689 NKPD1Q17RQ9 610 aa7.12□□□□□ -1.27
UBR3-211ENST00000487689 TTBK2Q6IQ55 1244 aa7.12□□□□□ -1.27
UBR3-211ENST00000487689 ATG14Q6ZNE5 492 aa7.12□□□□□ -1.27
UBR3-211ENST00000487689 C20orf173Q96LM9 149 aa7.12□□□□□ -1.27
UBR3-211ENST00000487689 SETDB2Q96T68 719 aa7.12□□□□□ -1.27
UBR3-211ENST00000487689 SNCAIPQ9Y6H5 919 aa7.12□□□□□ -1.27
UBR3-211ENST00000487689 P4HBP07237 508 aaKnown RBP7.11□□□□□ -1.27
UBR3-211ENST00000487689 MFSD2AQ8NA29 543 aa7.11□□□□□ -1.27
UBR3-211ENST00000487689 CARS2Q9HA77 564 aaKnown RBP7.11□□□□□ -1.27
UBR3-211ENST00000487689 C19orf73Q9NVV2 129 aa7.11□□□□□ -1.27
UBR3-211ENST00000487689 TCAF2A6NFQ2 919 aa7.1□□□□□ -1.27
UBR3-211ENST00000487689 PRPF40AO75400 957 aaKnown RBP7.1□□□□□ -1.27
UBR3-211ENST00000487689 WIPI1Q5MNZ9 446 aaPredicted RBP7.1□□□□□ -1.27
UBR3-211ENST00000487689 SFRP5Q5T4F7 317 aa7.1□□□□□ -1.27
UBR3-211ENST00000487689 HID1Q8IV36 788 aa7.1□□□□□ -1.27
UBR3-211ENST00000487689 PLPPR2Q96GM1 343 aa7.1□□□□□ -1.27
UBR3-211ENST00000487689 CCDC120Q96HB5 630 aa7.1□□□□□ -1.27
UBR3-211ENST00000487689 MIPEPQ99797 713 aa7.1□□□□□ -1.27
UBR3-211ENST00000487689 RPS26P62854 115 aaKnown RBP7.09□□□□□ -1.27
UBR3-211ENST00000487689 RING1Q06587 406 aa7.09□□□□□ -1.27
UBR3-211ENST00000487689 EAPPQ56P03 285 aaPredicted RBP7.09□□□□□ -1.27
UBR3-211ENST00000487689 LRFN4Q6PJG9 635 aa7.09□□□□□ -1.27
UBR3-211ENST00000487689 MFSD4AQ8N468 514 aa7.09□□□□□ -1.27
UBR3-211ENST00000487689 RELTQ969Z4 430 aa7.09□□□□□ -1.27
UBR3-211ENST00000487689 WNT10AQ9GZT5 417 aa7.09□□□□□ -1.27
UBR3-211ENST00000487689 DCP1AQ9NPI6 582 aaPredicted RBP7.09□□□□□ -1.27
UBR3-211ENST00000487689 NUAK1O60285 661 aa7.08□□□□□ -1.28
UBR3-211ENST00000487689 MED14OSP0DP75 135 aa7.08□□□□□ -1.28
UBR3-211ENST00000487689 RLBP1P12271 317 aa7.08□□□□□ -1.28
UBR3-211ENST00000487689 GDNFP39905 211 aa7.08□□□□□ -1.28
UBR3-211ENST00000487689 COX4I2Q96KJ9 171 aa7.08□□□□□ -1.28
UBR3-211ENST00000487689 TRAIPQ9BWF2 469 aa7.08□□□□□ -1.28
UBR3-211ENST00000487689 EPB41L4BQ9H329 900 aa7.08□□□□□ -1.28
UBR3-211ENST00000487689 SMG5Q9UPR3 1016 aaKnown RBP7.08□□□□□ -1.28
UBR3-211ENST00000487689 ETV2O00321 342 aaPredicted RBP7.07□□□□□ -1.28
UBR3-211ENST00000487689 EOMESO95936 686 aa7.07□□□□□ -1.28
UBR3-211ENST00000487689 NTF4P34130 210 aa7.07□□□□□ -1.28
UBR3-211ENST00000487689 ITGAEP38570 1179 aa7.07□□□□□ -1.28
UBR3-211ENST00000487689 PDE4BQ07343 736 aa7.07□□□□□ -1.28
UBR3-211ENST00000487689 INPP5AQ14642 412 aa7.07□□□□□ -1.28
UBR3-211ENST00000487689 CDKAL1Q5VV42 579 aa7.07□□□□□ -1.28
UBR3-211ENST00000487689 MIR1-1HGQ9H1L0 117 aa7.07□□□□□ -1.28
UBR3-211ENST00000487689 LETMD1Q6P1Q0 360 aa7.06□□□□□ -1.28
UBR3-211ENST00000487689 UBE3DQ7Z6J8 389 aa7.06□□□□□ -1.28
UBR3-211ENST00000487689 NPAS4Q8IUM7 802 aa7.06□□□□□ -1.28
UBR3-211ENST00000487689 TACC3Q9Y6A5 838 aa7.06□□□□□ -1.28
UBR3-211ENST00000487689 AK5Q9Y6K8 562 aa7.06□□□□□ -1.28
UBR3-211ENST00000487689 SLITRK5O94991 958 aa7.05□□□□□ -1.28
UBR3-211ENST00000487689 CBX7O95931 251 aa7.05□□□□□ -1.28
UBR3-211ENST00000487689 GRK4P32298 578 aa7.05□□□□□ -1.28
UBR3-211ENST00000487689 CAP2P40123 477 aa7.05□□□□□ -1.28
UBR3-211ENST00000487689 LINC00310P59036 64 aa7.05□□□□□ -1.28
UBR3-211ENST00000487689 MAP3K11Q16584 847 aa7.05□□□□□ -1.28
UBR3-211ENST00000487689 RASIP1Q5U651 963 aa7.05□□□□□ -1.28
UBR3-211ENST00000487689 HSPA12BQ96MM6 686 aa7.05□□□□□ -1.28
UBR3-211ENST00000487689 ATP13A1Q9HD20 1204 aa7.05□□□□□ -1.28
UBR3-211ENST00000487689 PGRP06401 933 aa7.04□□□□□ -1.28
UBR3-211ENST00000487689 GLDCP23378 1020 aa7.04□□□□□ -1.28
UBR3-211ENST00000487689 ETV3P41162 512 aa7.04□□□□□ -1.28
UBR3-211ENST00000487689 KIR3DL1P43629 444 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms