RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 HP1BP3Q5SSJ5 553 aaPredicted RBP8.59□□□□□ -1.03
CUL3-211ENST00000487558 MRFAP1L1Q96HT8 127 aa8.59□□□□□ -1.03
CUL3-211ENST00000487558 PCDHA4Q9UN74 947 aa8.59□□□□□ -1.03
CUL3-211ENST00000487558 KLF4O43474 513 aa8.58□□□□□ -1.04
CUL3-211ENST00000487558 MAOBP27338 520 aa8.58□□□□□ -1.04
CUL3-211ENST00000487558 CLCQ05315 142 aa8.58□□□□□ -1.04
CUL3-211ENST00000487558 RAB33AQ14088 237 aa8.58□□□□□ -1.04
CUL3-211ENST00000487558 BMS1Q14692 1282 aaKnown RBP8.58□□□□□ -1.04
CUL3-211ENST00000487558 MPRIPQ6WCQ1 1025 aa8.58□□□□□ -1.04
CUL3-211ENST00000487558 GPBAR1Q8TDU6 330 aa8.58□□□□□ -1.04
CUL3-211ENST00000487558 USP26Q9BXU7 913 aa8.58□□□□□ -1.04
CUL3-211ENST00000487558 EHMT1Q9H9B1 1298 aa8.58□□□□□ -1.04
CUL3-211ENST00000487558 CYP4F12Q9HCS2 524 aa8.58□□□□□ -1.04
CUL3-211ENST00000487558 ATG3Q9NT62 314 aa8.58□□□□□ -1.04
CUL3-211ENST00000487558 ZNRF3Q9ULT6 936 aa8.58□□□□□ -1.04
CUL3-211ENST00000487558 RNF114Q9Y508 228 aa8.58□□□□□ -1.04
CUL3-211ENST00000487558 PCDHB14Q9Y5E9 798 aa8.58□□□□□ -1.04
CUL3-211ENST00000487558 SNCAIPQ9Y6H5 919 aa8.58□□□□□ -1.04
CUL3-211ENST00000487558 DRD2P14416 443 aa8.57□□□□□ -1.04
CUL3-211ENST00000487558 SERINC3Q13530 473 aa8.57□□□□□ -1.04
CUL3-211ENST00000487558 PDE3AQ14432 1141 aa8.57□□□□□ -1.04
CUL3-211ENST00000487558 MSMPQ1L6U9 139 aa8.57□□□□□ -1.04
CUL3-211ENST00000487558 EXOSC6Q5RKV6 272 aaKnown RBP8.57□□□□□ -1.04
CUL3-211ENST00000487558 HDXQ7Z353 690 aa8.57□□□□□ -1.04
CUL3-211ENST00000487558 GIMAP7Q8NHV1 300 aa8.57□□□□□ -1.04
CUL3-211ENST00000487558 PIF1Q9H611 641 aa8.57□□□□□ -1.04
CUL3-211ENST00000487558 CDK11AQ9UQ88 783 aaPredicted RBP8.57□□□□□ -1.04
CUL3-211ENST00000487558 LEMD3Q9Y2U8 911 aa8.57□□□□□ -1.04
CUL3-211ENST00000487558 KRTAP4-8A0A0G2JLE6 195 aa8.56□□□□□ -1.04
CUL3-211ENST00000487558 SMAD7O15105 426 aaKnown RBP8.56□□□□□ -1.04
CUL3-211ENST00000487558 ATE1O95260 518 aa8.56□□□□□ -1.04
CUL3-211ENST00000487558 FOSL1P15407 271 aa8.56□□□□□ -1.04
CUL3-211ENST00000487558 RXRBP28702 533 aa8.56□□□□□ -1.04
CUL3-211ENST00000487558 CPSF6Q16630 551 aaKnown RBP eCLIP8.56□□□□□ -1.04
CUL3-211ENST00000487558 LRRFIP1Q32MZ4 808 aaKnown RBP8.56□□□□□ -1.04
CUL3-211ENST00000487558 SHISA5Q8N114 240 aa8.56□□□□□ -1.04
CUL3-211ENST00000487558 FBXL6Q8N531 539 aa8.56□□□□□ -1.04
CUL3-211ENST00000487558 RBBP8NLQ8NC74 664 aaPredicted RBP8.56□□□□□ -1.04
CUL3-211ENST00000487558 C2CD4AQ8NCU7 369 aaPredicted RBP8.56□□□□□ -1.04
CUL3-211ENST00000487558 HNRNPLLQ8WVV9 542 aaKnown RBP8.56□□□□□ -1.04
CUL3-211ENST00000487558 NRSN2Q9GZP1 204 aa8.56□□□□□ -1.04
CUL3-211ENST00000487558 CCDC86Q9H6F5 360 aaKnown RBP8.56□□□□□ -1.04
CUL3-211ENST00000487558 FAM95CA0A1B0GW59 222 aa8.55□□□□□ -1.04
CUL3-211ENST00000487558 MLECQ14165 292 aa8.55□□□□□ -1.04
CUL3-211ENST00000487558 CDPF1Q6NVV7 123 aa8.55□□□□□ -1.04
CUL3-211ENST00000487558 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.55□□□□□ -1.04
CUL3-211ENST00000487558 POLR3KQ9Y2Y1 108 aaPredicted RBP8.55□□□□□ -1.04
CUL3-211ENST00000487558 TACC3Q9Y6A5 838 aa8.55□□□□□ -1.04
CUL3-211ENST00000487558 GFRA2O00451 464 aa8.54□□□□□ -1.04
CUL3-211ENST00000487558 GRIN3BO60391 1043 aa8.54□□□□□ -1.04
CUL3-211ENST00000487558 ECEL1O95672 775 aa8.54□□□□□ -1.04
CUL3-211ENST00000487558 PRNPP04156 253 aa8.54□□□□□ -1.04
CUL3-211ENST00000487558 SLFN14P0C7P3 912 aa8.54□□□□□ -1.04
CUL3-211ENST00000487558 YBX3P16989 372 aaKnown RBP eCLIP8.54□□□□□ -1.04
CUL3-211ENST00000487558 ZNF746Q6NUN9 644 aaPredicted RBP8.54□□□□□ -1.04
CUL3-211ENST00000487558 PAOXQ6QHF9 649 aa8.54□□□□□ -1.04
CUL3-211ENST00000487558 NFXL1Q6ZNB6 911 aa8.54□□□□□ -1.04
CUL3-211ENST00000487558 LRP10Q7Z4F1 713 aa8.54□□□□□ -1.04
CUL3-211ENST00000487558 ABI1Q8IZP0 508 aa8.54□□□□□ -1.04
CUL3-211ENST00000487558 FBLIM1Q8WUP2 373 aa8.54□□□□□ -1.04
CUL3-211ENST00000487558 ELMO3Q96BJ8 720 aa8.54□□□□□ -1.04
CUL3-211ENST00000487558 SRPK1Q96SB4 655 aaKnown RBP8.54□□□□□ -1.04
CUL3-211ENST00000487558 OSBPL1AQ9BXW6 950 aa8.54□□□□□ -1.04
CUL3-211ENST00000487558 ZNF862O60290 1169 aa8.53□□□□□ -1.04
CUL3-211ENST00000487558 HMGB1P09429 215 aaKnown RBP8.53□□□□□ -1.04
CUL3-211ENST00000487558 USP11P51784 963 aa8.53□□□□□ -1.04
CUL3-211ENST00000487558 SOX4Q06945 474 aaPredicted RBP8.53□□□□□ -1.04
CUL3-211ENST00000487558 NFKBIBQ15653 356 aa8.53□□□□□ -1.04
CUL3-211ENST00000487558 WIPI1Q5MNZ9 446 aaPredicted RBP8.53□□□□□ -1.04
CUL3-211ENST00000487558 EZH1Q92800 747 aaPredicted RBP8.53□□□□□ -1.04
CUL3-211ENST00000487558 PLPPR2Q96GM1 343 aa8.53□□□□□ -1.04
CUL3-211ENST00000487558 ACTR10Q9NZ32 417 aa8.53□□□□□ -1.04
CUL3-211ENST00000487558 PRR36Q9H6K5 1346 aa8.53□□□□□ -1.04
CUL3-211ENST00000487558 LIG1P18858 919 aa8.52□□□□□ -1.05
CUL3-211ENST00000487558 ADMP35318 185 aa8.52□□□□□ -1.05
CUL3-211ENST00000487558 PDE4BQ07343 736 aa8.52□□□□□ -1.05
CUL3-211ENST00000487558 INPP5AQ14642 412 aa8.52□□□□□ -1.05
CUL3-211ENST00000487558 KIF4BQ2VIQ3 1234 aa8.52□□□□□ -1.05
CUL3-211ENST00000487558 LRFN4Q6PJG9 635 aa8.52□□□□□ -1.05
CUL3-211ENST00000487558 LSRQ86X29 649 aaPredicted RBP8.52□□□□□ -1.05
CUL3-211ENST00000487558 FAM169BQ8N8A8 192 aa8.52□□□□□ -1.05
CUL3-211ENST00000487558 PUS7Q96PZ0 661 aaKnown RBP8.52□□□□□ -1.05
CUL3-211ENST00000487558 RAD18Q9NS91 495 aa8.52□□□□□ -1.05
CUL3-211ENST00000487558 CCDC39Q9UFE4 941 aa8.52□□□□□ -1.05
CUL3-211ENST00000487558 CDK8P49336 464 aa8.51□□□□□ -1.05
CUL3-211ENST00000487558 CASP7P55210 303 aa8.51□□□□□ -1.05
CUL3-211ENST00000487558 FXNQ16595 210 aa8.51□□□□□ -1.05
CUL3-211ENST00000487558 SDE2Q6IQ49 451 aa8.51□□□□□ -1.05
CUL3-211ENST00000487558 ZAR1Q86SH2 424 aa8.51□□□□□ -1.05
CUL3-211ENST00000487558 GATA6Q92908 595 aa8.51□□□□□ -1.05
CUL3-211ENST00000487558 METTL22Q9BUU2 404 aaPredicted RBP8.51□□□□□ -1.05
CUL3-211ENST00000487558 TBX22Q9Y458 520 aa8.51□□□□□ -1.05
CUL3-211ENST00000487558 SYNGAP1Q96PV0 1343 aa8.51□□□□□ -1.05
CUL3-211ENST00000487558 HTR3BO95264 441 aa8.5□□□□□ -1.05
CUL3-211ENST00000487558 CTSBP07858 339 aa8.5□□□□□ -1.05
CUL3-211ENST00000487558 PPP2R5EQ16537 467 aa8.5□□□□□ -1.05
CUL3-211ENST00000487558 CYFIP1Q7L576 1253 aa8.5□□□□□ -1.05
CUL3-211ENST00000487558 WDR89Q96FK6 387 aaPredicted RBP8.5□□□□□ -1.05
CUL3-211ENST00000487558 DEPDC7Q96QD5 511 aa8.5□□□□□ -1.05
CUL3-211ENST00000487558 TM9SF2Q99805 663 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms