RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 CSADQ9Y600 493 aa12.81□□□□□ -0.36
TOP3B-216ENST00000487485 SLC4A4Q9Y6R1 1079 aa12.81□□□□□ -0.36
TOP3B-216ENST00000487485 FLT1P17948 1338 aa12.81□□□□□ -0.36
TOP3B-216ENST00000487485 ZSWIM8A7E2V4 1837 aa12.81□□□□□ -0.36
TOP3B-216ENST00000487485 BTBD19C9JJ37 291 aa12.8□□□□□ -0.36
TOP3B-216ENST00000487485 CHMLP26374 656 aa12.8□□□□□ -0.36
TOP3B-216ENST00000487485 LACTBP83111 547 aaPredicted RBP12.8□□□□□ -0.36
TOP3B-216ENST00000487485 MTFR1Q15390 333 aa12.8□□□□□ -0.36
TOP3B-216ENST00000487485 CCDC129Q6ZRS4 1044 aa12.8□□□□□ -0.36
TOP3B-216ENST00000487485 ZSCAN29Q8IWY8 852 aaPredicted RBP12.8□□□□□ -0.36
TOP3B-216ENST00000487485 DPF3Q92784 378 aa12.8□□□□□ -0.36
TOP3B-216ENST00000487485 SHISA4Q96DD7 197 aa12.8□□□□□ -0.36
TOP3B-216ENST00000487485 RBM27Q9P2N5 1060 aaKnown RBP12.8□□□□□ -0.36
TOP3B-216ENST00000487485 DDTLA6NHG4 134 aaPredicted RBP12.79□□□□□ -0.36
TOP3B-216ENST00000487485 SPDYE5A6NIY4 337 aa12.79□□□□□ -0.36
TOP3B-216ENST00000487485 CETPP11597 493 aa12.79□□□□□ -0.36
TOP3B-216ENST00000487485 GNAT2P19087 354 aa12.79□□□□□ -0.36
TOP3B-216ENST00000487485 CTGFP29279 349 aa12.79□□□□□ -0.36
TOP3B-216ENST00000487485 KIF22Q14807 665 aa12.79□□□□□ -0.36
TOP3B-216ENST00000487485 SH3BP5LQ7L8J4 393 aa12.79□□□□□ -0.36
TOP3B-216ENST00000487485 ZKSCAN4Q969J2 545 aaPredicted RBP12.79□□□□□ -0.36
TOP3B-216ENST00000487485 DCP1AQ9NPI6 582 aaPredicted RBP12.79□□□□□ -0.36
TOP3B-216ENST00000487485 ATP8A2Q9NTI2 1148 aa12.79□□□□□ -0.36
TOP3B-216ENST00000487485 SNCAIPQ9Y6H5 919 aa12.79□□□□□ -0.36
TOP3B-216ENST00000487485 RPAP1Q9BWH6 1393 aaPredicted RBP12.79□□□□□ -0.36
TOP3B-216ENST00000487485 GSG1L2A8MUP6 293 aa12.78□□□□□ -0.36
TOP3B-216ENST00000487485 PATL2C9JE40 543 aaKnown RBP12.78□□□□□ -0.36
TOP3B-216ENST00000487485 IRF6O14896 467 aa12.78□□□□□ -0.36
TOP3B-216ENST00000487485 APPP05067 770 aa12.78□□□□□ -0.36
TOP3B-216ENST00000487485 ZNF589Q86UQ0 364 aaPredicted RBP12.78□□□□□ -0.36
TOP3B-216ENST00000487485 RUFY2Q8WXA3 655 aa12.78□□□□□ -0.36
TOP3B-216ENST00000487485 DDRGK1Q96HY6 314 aa12.78□□□□□ -0.36
TOP3B-216ENST00000487485 DHX36Q9H2U1 1008 aaKnown RBP12.78□□□□□ -0.36
TOP3B-216ENST00000487485 SAP30BPQ9UHR5 308 aaKnown RBP12.78□□□□□ -0.36
TOP3B-216ENST00000487485 PALD1Q9ULE6 856 aa12.78□□□□□ -0.36
TOP3B-216ENST00000487485 CCDC171Q6TFL3 1326 aa12.78□□□□□ -0.36
TOP3B-216ENST00000487485 ATRNL1Q5VV63 1379 aa12.78□□□□□ -0.36
TOP3B-216ENST00000487485 COL2A1P02458 1487 aaPredicted RBP12.78□□□□□ -0.36
TOP3B-216ENST00000487485 DDX60LQ5H9U9 1706 aaKnown RBP12.77□□□□□ -0.36
TOP3B-216ENST00000487485 COL6A3P12111 3177 aa12.77□□□□□ -0.37
TOP3B-216ENST00000487485 MFAP1P55081 439 aaKnown RBP12.77□□□□□ -0.37
TOP3B-216ENST00000487485 SNAPC2Q13487 334 aa12.77□□□□□ -0.37
TOP3B-216ENST00000487485 C17orf99Q6UX52 265 aa12.77□□□□□ -0.37
TOP3B-216ENST00000487485 MIGA2Q7L4E1 593 aa12.77□□□□□ -0.37
TOP3B-216ENST00000487485 ERO1BQ86YB8 467 aa12.77□□□□□ -0.37
TOP3B-216ENST00000487485 IFNL3Q8IZI9 196 aa12.77□□□□□ -0.37
TOP3B-216ENST00000487485 HOOK2Q96ED9 719 aa12.77□□□□□ -0.37
TOP3B-216ENST00000487485 ZCCHC17Q9NP64 241 aaKnown RBP12.77□□□□□ -0.37
TOP3B-216ENST00000487485 MCM9Q9NXL9 1143 aa12.77□□□□□ -0.37
TOP3B-216ENST00000487485 CPA4Q9UI42 421 aa12.77□□□□□ -0.37
TOP3B-216ENST00000487485 SIPA1L1O43166 1804 aa12.76□□□□□ -0.37
TOP3B-216ENST00000487485 CDC45O75419 566 aa12.76□□□□□ -0.37
TOP3B-216ENST00000487485 GNRH1P01148 92 aa12.76□□□□□ -0.37
TOP3B-216ENST00000487485 POLR3DP05423 398 aaPredicted RBP12.76□□□□□ -0.37
TOP3B-216ENST00000487485 HLA-DOAP06340 250 aa12.76□□□□□ -0.37
TOP3B-216ENST00000487485 PSMC4P43686 418 aa12.76□□□□□ -0.37
TOP3B-216ENST00000487485 PRMT2P55345 433 aa12.76□□□□□ -0.37
TOP3B-216ENST00000487485 VPS53Q5VIR6 699 aa12.76□□□□□ -0.37
TOP3B-216ENST00000487485 GIMAP6Q6P9H5 292 aa12.76□□□□□ -0.37
TOP3B-216ENST00000487485 TTC6Q86TZ1 520 aa12.76□□□□□ -0.37
TOP3B-216ENST00000487485 TRIM47Q96LD4 638 aa12.76□□□□□ -0.37
TOP3B-216ENST00000487485 WRNIP1Q96S55 665 aa12.76□□□□□ -0.37
TOP3B-216ENST00000487485 NACAP1Q9BZK3 213 aa12.76□□□□□ -0.37
TOP3B-216ENST00000487485 IL25Q9H293 177 aa12.76□□□□□ -0.37
TOP3B-216ENST00000487485 PI4KBQ9UBF8 816 aa12.76□□□□□ -0.37
TOP3B-216ENST00000487485 SRRDQ9UH36 339 aa12.76□□□□□ -0.37
TOP3B-216ENST00000487485 USP17L12C9JPN9 530 aa12.75□□□□□ -0.37
TOP3B-216ENST00000487485 USP17L21D6R901 530 aa12.75□□□□□ -0.37
TOP3B-216ENST00000487485 DLL1O00548 723 aa12.75□□□□□ -0.37
TOP3B-216ENST00000487485 FOXP2O15409 715 aa12.75□□□□□ -0.37
TOP3B-216ENST00000487485 SGSM2O43147 1006 aa12.75□□□□□ -0.37
TOP3B-216ENST00000487485 SLURP2P0DP57 97 aa12.75□□□□□ -0.37
TOP3B-216ENST00000487485 HSPD1P10809 573 aaKnown RBP12.75□□□□□ -0.37
TOP3B-216ENST00000487485 OSBPP22059 807 aa12.75□□□□□ -0.37
TOP3B-216ENST00000487485 TDO2P48775 406 aa12.75□□□□□ -0.37
TOP3B-216ENST00000487485 PLCD1P51178 756 aa12.75□□□□□ -0.37
TOP3B-216ENST00000487485 PPIL2Q13356 520 aa12.75□□□□□ -0.37
TOP3B-216ENST00000487485 DCAF15Q66K64 600 aa12.75□□□□□ -0.37
TOP3B-216ENST00000487485 CTR9Q6PD62 1173 aa12.75□□□□□ -0.37
TOP3B-216ENST00000487485 CASC1Q6TDU7 716 aa12.75□□□□□ -0.37
TOP3B-216ENST00000487485 UBE2Q1Q7Z7E8 422 aa12.75□□□□□ -0.37
TOP3B-216ENST00000487485 FOXP4Q8IVH2 680 aaPredicted RBP12.75□□□□□ -0.37
TOP3B-216ENST00000487485 AMOTL1Q8IY63 956 aa12.75□□□□□ -0.37
TOP3B-216ENST00000487485 RAD50Q92878 1312 aa12.75□□□□□ -0.37
TOP3B-216ENST00000487485 PRO3102Q9H379 93 aa12.75□□□□□ -0.37
TOP3B-216ENST00000487485 EPB41L4AQ9HCS5 686 aaPredicted RBP12.75□□□□□ -0.37
TOP3B-216ENST00000487485 MYH8P13535 1937 aa12.74□□□□□ -0.37
TOP3B-216ENST00000487485 TBC1D12O60347 775 aa12.74□□□□□ -0.37
TOP3B-216ENST00000487485 FMNL1O95466 1100 aaPredicted RBP12.74□□□□□ -0.37
TOP3B-216ENST00000487485 GJB1P08034 283 aa12.74□□□□□ -0.37
TOP3B-216ENST00000487485 CYP2D6P10635 497 aa12.74□□□□□ -0.37
TOP3B-216ENST00000487485 CCL5P13501 91 aa12.74□□□□□ -0.37
TOP3B-216ENST00000487485 INPP5BP32019 993 aa12.74□□□□□ -0.37
TOP3B-216ENST00000487485 GRK4P32298 578 aa12.74□□□□□ -0.37
TOP3B-216ENST00000487485 GJA8P48165 433 aa12.74□□□□□ -0.37
TOP3B-216ENST00000487485 MAP3K10Q02779 954 aa12.74□□□□□ -0.37
TOP3B-216ENST00000487485 SBK1Q52WX2 424 aa12.74□□□□□ -0.37
TOP3B-216ENST00000487485 C12orf60Q5U649 245 aa12.74□□□□□ -0.37
TOP3B-216ENST00000487485 CRACR2BQ8N4Y2 399 aaPredicted RBP12.74□□□□□ -0.37
TOP3B-216ENST00000487485 SLC17A8Q8NDX2 589 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms