RNA–Protein interactions for RNA: ENST00000487427.5

ITSN1-229, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 805 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-229ENST00000487427 GPATCH3Q96I76 525 aa15.05■□□□□ -0
ITSN1-229ENST00000487427 PNMA3Q9UL41 463 aa15.05■□□□□ -0
ITSN1-229ENST00000487427 MAST2Q6P0Q8 1798 aa15.05■□□□□ -0
ITSN1-229ENST00000487427 C19orf81C9J6K1 198 aa15.04■□□□□ -0
ITSN1-229ENST00000487427 GDF11O95390 407 aa15.04■□□□□ -0
ITSN1-229ENST00000487427 FMNL1O95466 1100 aaPredicted RBP15.04■□□□□ -0
ITSN1-229ENST00000487427 POLR3DP05423 398 aaPredicted RBP15.04■□□□□ -0
ITSN1-229ENST00000487427 PLCD1P51178 756 aa15.04■□□□□ -0
ITSN1-229ENST00000487427 PABPC4Q13310 644 aaKnown RBP eCLIP15.04■□□□□ -0
ITSN1-229ENST00000487427 UBE3CQ15386 1083 aa15.04■□□□□ -0
ITSN1-229ENST00000487427 TREML2Q5T2D2 321 aa15.04■□□□□ -0
ITSN1-229ENST00000487427 ZSCAN25Q6NSZ9 544 aa15.04■□□□□ -0
ITSN1-229ENST00000487427 SMCR8Q8TEV9 937 aaPredicted RBP15.04■□□□□ -0
ITSN1-229ENST00000487427 TRIM47Q96LD4 638 aa15.04■□□□□ -0
ITSN1-229ENST00000487427 ZBTB21Q9ULJ3 1066 aa15.04■□□□□ -0
ITSN1-229ENST00000487427 PTCH2Q9Y6C5 1203 aa15.04■□□□□ -0
ITSN1-229ENST00000487427 USP17L10C9JJH3 530 aa15.03■□□□□ -0
ITSN1-229ENST00000487427 CTGFP29279 349 aa15.03■□□□□ -0
ITSN1-229ENST00000487427 CERKLQ49MI3 558 aaPredicted RBP15.03■□□□□ -0
ITSN1-229ENST00000487427 SLC9C1Q4G0N8 1177 aa15.03■□□□□ -0
ITSN1-229ENST00000487427 LCORLQ8N3X6 602 aa15.03■□□□□ -0
ITSN1-229ENST00000487427 DCP1AQ9NPI6 582 aaPredicted RBP15.03■□□□□ -0
ITSN1-229ENST00000487427 MCM9Q9NXL9 1143 aa15.03■□□□□ -0
ITSN1-229ENST00000487427 TMOD4Q9NZQ9 345 aa15.03■□□□□ -0
ITSN1-229ENST00000487427 SRRDQ9UH36 339 aa15.03■□□□□ -0
ITSN1-229ENST00000487427 MYO5AQ9Y4I1 1855 aaKnown RBP15.02■□□□□ -0
ITSN1-229ENST00000487427 ECM2O94769 699 aaPredicted RBP15.02■□□□□ -0
ITSN1-229ENST00000487427 GH2P01242 217 aa15.02■□□□□ -0
ITSN1-229ENST00000487427 OSBPP22059 807 aa15.02■□□□□ -0
ITSN1-229ENST00000487427 FCGRTP55899 365 aa15.02■□□□□ -0
ITSN1-229ENST00000487427 MTMR2Q13614 643 aa15.02■□□□□ -0
ITSN1-229ENST00000487427 SHROOM1Q2M3G4 852 aaPredicted RBP15.02■□□□□ -0
ITSN1-229ENST00000487427 SLFNL1Q499Z3 407 aa15.02■□□□□ -0
ITSN1-229ENST00000487427 SDR42E1Q8WUS8 393 aa15.02■□□□□ -0
ITSN1-229ENST00000487427 ZNF333Q96JL9 665 aa15.02■□□□□ -0
ITSN1-229ENST00000487427 CRBNQ96SW2 442 aa15.02■□□□□ -0
ITSN1-229ENST00000487427 ARMT1Q9H993 441 aa15.02■□□□□ -0
ITSN1-229ENST00000487427 ATP8A2Q9NTI2 1148 aa15.02■□□□□ -0
ITSN1-229ENST00000487427 TAOK2Q9UL54 1235 aa15.02■□□□□ -0
ITSN1-229ENST00000487427 MBD4O95243 580 aa15.01□□□□□ -0.01
ITSN1-229ENST00000487427 HOXA7P31268 230 aaPredicted RBP15.01□□□□□ -0.01
ITSN1-229ENST00000487427 GCLCP48506 637 aaPredicted RBP15.01□□□□□ -0.01
ITSN1-229ENST00000487427 GABPAQ06546 454 aa15.01□□□□□ -0.01
ITSN1-229ENST00000487427 ABCB5Q2M3G0 1257 aa15.01□□□□□ -0.01
ITSN1-229ENST00000487427 ANKRD13CQ8N6S4 541 aa15.01□□□□□ -0.01
ITSN1-229ENST00000487427 ASCC2Q9H1I8 757 aaPredicted RBP15.01□□□□□ -0.01
ITSN1-229ENST00000487427 CABP5Q9NP86 173 aa15.01□□□□□ -0.01
ITSN1-229ENST00000487427 SSUH2Q9Y2M2 353 aa15.01□□□□□ -0.01
ITSN1-229ENST00000487427 DOCK1Q14185 1865 aa15.01□□□□□ -0.01
ITSN1-229ENST00000487427 PRKAB2O43741 272 aa15□□□□□ -0.01
ITSN1-229ENST00000487427 SHMT1P34896 483 aa15□□□□□ -0.01
ITSN1-229ENST00000487427 AAMPQ13685 434 aa15□□□□□ -0.01
ITSN1-229ENST00000487427 FAM110CQ1W6H9 321 aa15□□□□□ -0.01
ITSN1-229ENST00000487427 USP17L2Q6R6M4 530 aa15□□□□□ -0.01
ITSN1-229ENST00000487427 KBTBD3Q8NAB2 608 aa15□□□□□ -0.01
ITSN1-229ENST00000487427 RAET1EQ8TD07 263 aa15□□□□□ -0.01
ITSN1-229ENST00000487427 DDRGK1Q96HY6 314 aa15□□□□□ -0.01
ITSN1-229ENST00000487427 TMEM106CQ9BVX2 250 aa15□□□□□ -0.01
ITSN1-229ENST00000487427 TTC41PQ6P2S7 1318 aa14.99□□□□□ -0.01
ITSN1-229ENST00000487427 POTEFA5A3E0 1075 aa14.99□□□□□ -0.01
ITSN1-229ENST00000487427 CHGBP05060 677 aa14.99□□□□□ -0.01
ITSN1-229ENST00000487427 IRX3P78415 501 aaPredicted RBP14.99□□□□□ -0.01
ITSN1-229ENST00000487427 RAB3GAP1Q15042 981 aa14.99□□□□□ -0.01
ITSN1-229ENST00000487427 PUS7LQ9H0K6 701 aaKnown RBP14.99□□□□□ -0.01
ITSN1-229ENST00000487427 EMILIN3Q9NT22 766 aa14.99□□□□□ -0.01
ITSN1-229ENST00000487427 MYPNQ86TC9 1320 aa14.98□□□□□ -0.01
ITSN1-229ENST00000487427 TNPO2O14787 897 aaKnown RBP14.98□□□□□ -0.01
ITSN1-229ENST00000487427 ERC2O15083 957 aa14.98□□□□□ -0.01
ITSN1-229ENST00000487427 ZFYP08048 801 aaPredicted RBP14.98□□□□□ -0.01
ITSN1-229ENST00000487427 CYP2D6P10635 497 aa14.98□□□□□ -0.01
ITSN1-229ENST00000487427 GRK4P32298 578 aa14.98□□□□□ -0.01
ITSN1-229ENST00000487427 PRKCZQ05513 592 aa14.98□□□□□ -0.01
ITSN1-229ENST00000487427 TSHZ3Q63HK5 1081 aa14.98□□□□□ -0.01
ITSN1-229ENST00000487427 SH3TC2Q8TF17 1288 aa14.98□□□□□ -0.01
ITSN1-229ENST00000487427 P2RX7Q99572 595 aaKnown RBP14.98□□□□□ -0.01
ITSN1-229ENST00000487427 FEZ1Q99689 392 aa14.98□□□□□ -0.01
ITSN1-229ENST00000487427 KIAA1683Q9H0B3 1180 aa14.98□□□□□ -0.01
ITSN1-229ENST00000487427 ZBTB47Q9UFB7 747 aaPredicted RBP14.98□□□□□ -0.01
ITSN1-229ENST00000487427 SWAP70Q9UH65 585 aa14.98□□□□□ -0.01
ITSN1-229ENST00000487427 SLC4A4Q9Y6R1 1079 aa14.98□□□□□ -0.01
ITSN1-229ENST00000487427 SIPA1L1O43166 1804 aa14.97□□□□□ -0.01
ITSN1-229ENST00000487427 PHIPQ8WWQ0 1821 aa14.97□□□□□ -0.01
ITSN1-229ENST00000487427 USP17L12C9JPN9 530 aa14.97□□□□□ -0.01
ITSN1-229ENST00000487427 USP17L21D6R901 530 aa14.97□□□□□ -0.01
ITSN1-229ENST00000487427 RNF113AO15541 343 aaKnown RBP14.97□□□□□ -0.01
ITSN1-229ENST00000487427 GLRX3O76003 335 aaKnown RBP14.97□□□□□ -0.01
ITSN1-229ENST00000487427 USP14P54578 494 aa14.97□□□□□ -0.01
ITSN1-229ENST00000487427 HDAC1Q13547 482 aaPredicted RBP14.97□□□□□ -0.01
ITSN1-229ENST00000487427 LRRFIP1Q32MZ4 808 aaKnown RBP14.97□□□□□ -0.01
ITSN1-229ENST00000487427 C12orf60Q5U649 245 aa14.97□□□□□ -0.01
ITSN1-229ENST00000487427 AMOTL1Q8IY63 956 aa14.97□□□□□ -0.01
ITSN1-229ENST00000487427 COA7Q96BR5 231 aa14.97□□□□□ -0.01
ITSN1-229ENST00000487427 C12orf42Q96LP6 360 aa14.97□□□□□ -0.01
ITSN1-229ENST00000487427 STRBPQ96SI9 672 aaKnown RBP14.97□□□□□ -0.01
ITSN1-229ENST00000487427 HTTP42858 3142 aa14.97□□□□□ -0.01
ITSN1-229ENST00000487427 FOCADQ5VW36 1801 aa14.96□□□□□ -0.01
ITSN1-229ENST00000487427 GUCY1A2P33402 732 aa14.96□□□□□ -0.01
ITSN1-229ENST00000487427 FLT3LGP49771 235 aa14.96□□□□□ -0.01
ITSN1-229ENST00000487427 EVX2Q03828 476 aa14.96□□□□□ -0.01
ITSN1-229ENST00000487427 SEPT2Q15019 361 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms