RNA–Protein interactions for RNA: ENST00000487384.5

HOXA9-204, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-204ENST00000487384 RAI14Q9P0K7 980 aa10.37□□□□□ -0.75
HOXA9-204ENST00000487384 HMG20BQ9P0W2 317 aa10.37□□□□□ -0.75
HOXA9-204ENST00000487384 MORF4L1Q9UBU8 362 aa10.37□□□□□ -0.75
HOXA9-204ENST00000487384 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.37□□□□□ -0.75
HOXA9-204ENST00000487384 FOCADQ5VW36 1801 aa10.37□□□□□ -0.75
HOXA9-204ENST00000487384 MYH1P12882 1939 aa10.37□□□□□ -0.75
HOXA9-204ENST00000487384 PDS5AQ29RF7 1337 aaKnown RBP10.36□□□□□ -0.75
HOXA9-204ENST00000487384 GDF11O95390 407 aa10.36□□□□□ -0.75
HOXA9-204ENST00000487384 LDHCP07864 332 aa10.36□□□□□ -0.75
HOXA9-204ENST00000487384 BACE1P56817 501 aa10.36□□□□□ -0.75
HOXA9-204ENST00000487384 HERVK_113P62684 666 aa10.36□□□□□ -0.75
HOXA9-204ENST00000487384 GSTO1P78417 241 aa10.36□□□□□ -0.75
HOXA9-204ENST00000487384 JAG1P78504 1218 aa10.36□□□□□ -0.75
HOXA9-204ENST00000487384 PDE3AQ14432 1141 aa10.36□□□□□ -0.75
HOXA9-204ENST00000487384 MVPQ14764 893 aaKnown RBP10.36□□□□□ -0.75
HOXA9-204ENST00000487384 Q3C1V9 767 aa10.36□□□□□ -0.75
HOXA9-204ENST00000487384 LHX8Q68G74 356 aa10.36□□□□□ -0.75
HOXA9-204ENST00000487384 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.36□□□□□ -0.75
HOXA9-204ENST00000487384 CCAR1Q8IX12 1150 aaKnown RBP10.36□□□□□ -0.75
HOXA9-204ENST00000487384 GPRC5AQ8NFJ5 357 aa10.36□□□□□ -0.75
HOXA9-204ENST00000487384 SH3RF3Q8TEJ3 882 aaPredicted RBP10.36□□□□□ -0.75
HOXA9-204ENST00000487384 MEIS3Q99687 375 aa10.36□□□□□ -0.75
HOXA9-204ENST00000487384 TBC1D2Q9BYX2 928 aa10.36□□□□□ -0.75
HOXA9-204ENST00000487384 PORCNQ9H237 461 aa10.36□□□□□ -0.75
HOXA9-204ENST00000487384 TTC28Q96AY4 2481 aa10.36□□□□□ -0.75
HOXA9-204ENST00000487384 MYO9BQ13459 2157 aa10.36□□□□□ -0.75
HOXA9-204ENST00000487384 MAST2Q6P0Q8 1798 aa10.36□□□□□ -0.75
HOXA9-204ENST00000487384 MUC3AQ02505 3323 aa10.35□□□□□ -0.75
HOXA9-204ENST00000487384 E9PSI1 815 aa10.35□□□□□ -0.75
HOXA9-204ENST00000487384 COL6A1P12109 1028 aa10.35□□□□□ -0.75
HOXA9-204ENST00000487384 XRCC5P13010 732 aaKnown RBP10.35□□□□□ -0.75
HOXA9-204ENST00000487384 ERVK-9P63128 1117 aa10.35□□□□□ -0.75
HOXA9-204ENST00000487384 ERVK-24P63145 666 aa10.35□□□□□ -0.75
HOXA9-204ENST00000487384 GORABQ5T7V8 394 aa10.35□□□□□ -0.75
HOXA9-204ENST00000487384 GPR142Q7Z601 462 aa10.35□□□□□ -0.75
HOXA9-204ENST00000487384 SPATA5Q8NB90 893 aa10.35□□□□□ -0.75
HOXA9-204ENST00000487384 SOCS4Q8WXH5 440 aa10.35□□□□□ -0.75
HOXA9-204ENST00000487384 GUCD1Q96NT3 240 aa10.35□□□□□ -0.75
HOXA9-204ENST00000487384 WDR18Q9BV38 432 aa10.35□□□□□ -0.75
HOXA9-204ENST00000487384 CWC22Q9HCG8 908 aaKnown RBP10.35□□□□□ -0.75
HOXA9-204ENST00000487384 RBPJLQ9UBG7 517 aa10.35□□□□□ -0.75
HOXA9-204ENST00000487384 HERC5Q9UII4 1024 aaKnown RBP10.35□□□□□ -0.75
HOXA9-204ENST00000487384 NOB1Q9ULX3 412 aaKnown RBP10.35□□□□□ -0.75
HOXA9-204ENST00000487384 AKAP2Q9Y2D5 859 aa10.35□□□□□ -0.75
HOXA9-204ENST00000487384 NDUFB9Q9Y6M9 179 aa10.35□□□□□ -0.75
HOXA9-204ENST00000487384 COL2A1P02458 1487 aaPredicted RBP10.35□□□□□ -0.75
HOXA9-204ENST00000487384 USP17L10C9JJH3 530 aa10.34□□□□□ -0.75
HOXA9-204ENST00000487384 SRGAP3O43295 1099 aa10.34□□□□□ -0.75
HOXA9-204ENST00000487384 ASNSP08243 561 aa10.34□□□□□ -0.75
HOXA9-204ENST00000487384 MAPK4P31152 587 aa10.34□□□□□ -0.75
HOXA9-204ENST00000487384 HOXA7P31268 230 aaPredicted RBP10.34□□□□□ -0.75
HOXA9-204ENST00000487384 RGS2P41220 211 aa10.34□□□□□ -0.75
HOXA9-204ENST00000487384 ATN1P54259 1190 aaPredicted RBP10.34□□□□□ -0.75
HOXA9-204ENST00000487384 ALDH1L2Q3SY69 923 aa10.34□□□□□ -0.75
HOXA9-204ENST00000487384 WDR78Q5VTH9 848 aa10.34□□□□□ -0.75
HOXA9-204ENST00000487384 POTEEQ6S8J3 1075 aa10.34□□□□□ -0.75
HOXA9-204ENST00000487384 PLEKHH3Q7Z736 793 aa10.34□□□□□ -0.75
HOXA9-204ENST00000487384 MAPKAPK5Q8IW41 473 aa10.34□□□□□ -0.75
HOXA9-204ENST00000487384 CRACR2BQ8N4Y2 399 aaPredicted RBP10.34□□□□□ -0.75
HOXA9-204ENST00000487384 TGFBRAP1Q8WUH2 860 aa10.34□□□□□ -0.75
HOXA9-204ENST00000487384 USP6NLQ92738 828 aa10.34□□□□□ -0.75
HOXA9-204ENST00000487384 CDCA7LQ96GN5 454 aa10.34□□□□□ -0.75
HOXA9-204ENST00000487384 LBHD1Q9BQE6 289 aaPredicted RBP10.34□□□□□ -0.75
HOXA9-204ENST00000487384 SENP6Q9GZR1 1112 aaPredicted RBP10.34□□□□□ -0.75
HOXA9-204ENST00000487384 DNAJC18Q9H819 358 aa10.34□□□□□ -0.75
HOXA9-204ENST00000487384 AATFQ9NY61 560 aaKnown RBP eCLIP10.34□□□□□ -0.75
HOXA9-204ENST00000487384 LRP2BPQ9P2M1 347 aa10.34□□□□□ -0.75
HOXA9-204ENST00000487384 PI4KBQ9UBF8 816 aa10.34□□□□□ -0.75
HOXA9-204ENST00000487384 LTBP2Q14767 1821 aa10.34□□□□□ -0.75
HOXA9-204ENST00000487384 RLFQ13129 1914 aa10.33□□□□□ -0.76
HOXA9-204ENST00000487384 SMCHD1A6NHR9 2005 aa10.33□□□□□ -0.76
HOXA9-204ENST00000487384 POTEB2H3BUK9 544 aa10.33□□□□□ -0.76
HOXA9-204ENST00000487384 MAP4K4O95819 1239 aaPredicted RBP10.33□□□□□ -0.76
HOXA9-204ENST00000487384 MCAMP43121 646 aa10.33□□□□□ -0.76
HOXA9-204ENST00000487384 SLFN5Q08AF3 891 aa10.33□□□□□ -0.76
HOXA9-204ENST00000487384 ZYXQ15942 572 aaKnown RBP10.33□□□□□ -0.76
HOXA9-204ENST00000487384 MORN1Q5T089 497 aa10.33□□□□□ -0.76
HOXA9-204ENST00000487384 TRMT44Q8IYL2 757 aaKnown RBP10.33□□□□□ -0.76
HOXA9-204ENST00000487384 APBA2Q99767 749 aa10.33□□□□□ -0.76
HOXA9-204ENST00000487384 NOL10Q9BSC4 688 aaKnown RBP10.33□□□□□ -0.76
HOXA9-204ENST00000487384 TRIM34Q9BYJ4 488 aa10.33□□□□□ -0.76
HOXA9-204ENST00000487384 SNRKQ9NRH2 765 aa10.33□□□□□ -0.76
HOXA9-204ENST00000487384 SAP30BPQ9UHR5 308 aaKnown RBP10.33□□□□□ -0.76
HOXA9-204ENST00000487384 PALD1Q9ULE6 856 aa10.33□□□□□ -0.76
HOXA9-204ENST00000487384 C19orf81C9J6K1 198 aa10.32□□□□□ -0.76
HOXA9-204ENST00000487384 ARID4AP29374 1257 aaPredicted RBP10.32□□□□□ -0.76
HOXA9-204ENST00000487384 CNGA1P29973 690 aa10.32□□□□□ -0.76
HOXA9-204ENST00000487384 NAA16Q6N069 864 aaPredicted RBP10.32□□□□□ -0.76
HOXA9-204ENST00000487384 DHX36Q9H2U1 1008 aaKnown RBP10.32□□□□□ -0.76
HOXA9-204ENST00000487384 EMILIN3Q9NT22 766 aa10.32□□□□□ -0.76
HOXA9-204ENST00000487384 FLRT1Q9NZU1 646 aa10.32□□□□□ -0.76
HOXA9-204ENST00000487384 ZBTB21Q9ULJ3 1066 aa10.32□□□□□ -0.76
HOXA9-204ENST00000487384 HDAC5Q9UQL6 1122 aa10.32□□□□□ -0.76
HOXA9-204ENST00000487384 ZNFX1Q9P2E3 1918 aaKnown RBP10.32□□□□□ -0.76
HOXA9-204ENST00000487384 FLT1P17948 1338 aa10.32□□□□□ -0.76
HOXA9-204ENST00000487384 MAP2K5Q13163 448 aa10.31□□□□□ -0.76
HOXA9-204ENST00000487384 ZNF697Q5TEC3 545 aa10.31□□□□□ -0.76
HOXA9-204ENST00000487384 FAM109BQ6ICB4 259 aaPredicted RBP10.31□□□□□ -0.76
HOXA9-204ENST00000487384 ADGRA1Q86SQ6 560 aa10.31□□□□□ -0.76
HOXA9-204ENST00000487384 EDC3Q96F86 508 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms