RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 FBRSQ9HAH7 460 aa6.34□□□□□ -1.39
SNRNP27-204ENST00000487029 PICK1Q9NRD5 415 aa6.34□□□□□ -1.39
SNRNP27-204ENST00000487029 CAPN6Q9Y6Q1 641 aa6.34□□□□□ -1.39
SNRNP27-204ENST00000487029 ADAMTS20P59510 1910 aa6.33□□□□□ -1.4
SNRNP27-204ENST00000487029 RALGPS1Q5JS13 557 aa6.33□□□□□ -1.4
SNRNP27-204ENST00000487029 CIAPIN1Q6FI81 312 aa6.33□□□□□ -1.4
SNRNP27-204ENST00000487029 CDC37L1Q7L3B6 337 aa6.33□□□□□ -1.4
SNRNP27-204ENST00000487029 MFSD4AQ8N468 514 aa6.33□□□□□ -1.4
SNRNP27-204ENST00000487029 C3orf58Q8NDZ4 430 aa6.33□□□□□ -1.4
SNRNP27-204ENST00000487029 ALPK1Q96QP1 1244 aa6.33□□□□□ -1.4
SNRNP27-204ENST00000487029 JAG2Q9Y219 1238 aa6.33□□□□□ -1.4
SNRNP27-204ENST00000487029 DNAJC25-GNG10A0A024R161 153 aa6.32□□□□□ -1.4
SNRNP27-204ENST00000487029 TCAF2A6NFQ2 919 aa6.32□□□□□ -1.4
SNRNP27-204ENST00000487029 ENC1O14682 589 aa6.32□□□□□ -1.4
SNRNP27-204ENST00000487029 LRIG2O94898 1065 aa6.32□□□□□ -1.4
SNRNP27-204ENST00000487029 XRCC5P13010 732 aaKnown RBP6.32□□□□□ -1.4
SNRNP27-204ENST00000487029 GLDCP23378 1020 aa6.32□□□□□ -1.4
SNRNP27-204ENST00000487029 LINC00310P59036 64 aa6.32□□□□□ -1.4
SNRNP27-204ENST00000487029 SLBPQ14493 270 aaKnown RBP eCLIP6.32□□□□□ -1.4
SNRNP27-204ENST00000487029 INPP5AQ14642 412 aa6.32□□□□□ -1.4
SNRNP27-204ENST00000487029 C22orf34Q6ZV56 151 aa6.32□□□□□ -1.4
SNRNP27-204ENST00000487029 ABHD4Q8TB40 342 aa6.32□□□□□ -1.4
SNRNP27-204ENST00000487029 UBE2FQ969M7 185 aa6.32□□□□□ -1.4
SNRNP27-204ENST00000487029 PPP4R2Q9NY27 417 aa6.32□□□□□ -1.4
SNRNP27-204ENST00000487029 SLAMF8Q9P0V8 285 aa6.32□□□□□ -1.4
SNRNP27-204ENST00000487029 TRIM37O94972 964 aa6.31□□□□□ -1.4
SNRNP27-204ENST00000487029 NKG7Q16617 165 aa6.31□□□□□ -1.4
SNRNP27-204ENST00000487029 SFRP5Q5T4F7 317 aa6.31□□□□□ -1.4
SNRNP27-204ENST00000487029 KRTAP5-3Q6L8H2 238 aa6.31□□□□□ -1.4
SNRNP27-204ENST00000487029 TPTE2Q6XPS3 522 aa6.31□□□□□ -1.4
SNRNP27-204ENST00000487029 TTC6Q86TZ1 520 aa6.31□□□□□ -1.4
SNRNP27-204ENST00000487029 ALKBH8Q96BT7 664 aaKnown RBP6.31□□□□□ -1.4
SNRNP27-204ENST00000487029 IRF2BPLQ9H1B7 796 aa6.31□□□□□ -1.4
SNRNP27-204ENST00000487029 NLRP2Q9NX02 1062 aa6.31□□□□□ -1.4
SNRNP27-204ENST00000487029 TPX2Q9ULW0 747 aaKnown RBP6.31□□□□□ -1.4
SNRNP27-204ENST00000487029 PCDHA4Q9UN74 947 aa6.31□□□□□ -1.4
SNRNP27-204ENST00000487029 WASH4PA8MWX3 477 aa6.3□□□□□ -1.4
SNRNP27-204ENST00000487029 NUAK1O60285 661 aa6.3□□□□□ -1.4
SNRNP27-204ENST00000487029 FBXO24O75426 580 aa6.3□□□□□ -1.4
SNRNP27-204ENST00000487029 PTPN11Q06124 597 aaPredicted RBP6.3□□□□□ -1.4
SNRNP27-204ENST00000487029 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.3□□□□□ -1.4
SNRNP27-204ENST00000487029 KCNN1Q92952 543 aa6.3□□□□□ -1.4
SNRNP27-204ENST00000487029 MIPEPQ99797 713 aa6.3□□□□□ -1.4
SNRNP27-204ENST00000487029 ZSWIM5Q9P217 1185 aa6.3□□□□□ -1.4
SNRNP27-204ENST00000487029 CBX7O95931 251 aa6.29□□□□□ -1.4
SNRNP27-204ENST00000487029 ESR1P03372 595 aa6.29□□□□□ -1.4
SNRNP27-204ENST00000487029 TRHRP34981 398 aaPredicted RBP6.29□□□□□ -1.4
SNRNP27-204ENST00000487029 LRFN4Q6PJG9 635 aa6.29□□□□□ -1.4
SNRNP27-204ENST00000487029 GZF1Q9H116 711 aaPredicted RBP6.29□□□□□ -1.4
SNRNP27-204ENST00000487029 HK2P52789 917 aa6.28□□□□□ -1.4
SNRNP27-204ENST00000487029 KCT2Q8NC54 265 aa6.28□□□□□ -1.4
SNRNP27-204ENST00000487029 ZNF507Q8TCN5 953 aa6.28□□□□□ -1.4
SNRNP27-204ENST00000487029 ELMO3Q96BJ8 720 aa6.28□□□□□ -1.4
SNRNP27-204ENST00000487029 DMRTB1Q96MA1 342 aa6.28□□□□□ -1.4
SNRNP27-204ENST00000487029 RBCK1Q9BYM8 510 aa6.28□□□□□ -1.4
SNRNP27-204ENST00000487029 SP110Q9HB58 689 aa6.28□□□□□ -1.4
SNRNP27-204ENST00000487029 GNEQ9Y223 722 aaKnown RBP6.28□□□□□ -1.4
SNRNP27-204ENST00000487029 IVNS1ABPQ9Y6Y0 642 aa6.28□□□□□ -1.4
SNRNP27-204ENST00000487029 PRAMEF27A3QJZ7 478 aa6.27□□□□□ -1.41
SNRNP27-204ENST00000487029 CDK8P49336 464 aa6.27□□□□□ -1.41
SNRNP27-204ENST00000487029 TNK2Q07912 1038 aa6.27□□□□□ -1.41
SNRNP27-204ENST00000487029 LLGL2Q6P1M3 1020 aa6.27□□□□□ -1.41
SNRNP27-204ENST00000487029 THAP5Q7Z6K1 395 aa6.27□□□□□ -1.41
SNRNP27-204ENST00000487029 MYLIPQ8WY64 445 aa6.27□□□□□ -1.41
SNRNP27-204ENST00000487029 RELTQ969Z4 430 aa6.27□□□□□ -1.41
SNRNP27-204ENST00000487029 SLC26A8Q96RN1 970 aa6.27□□□□□ -1.41
SNRNP27-204ENST00000487029 ADAMTS10Q9H324 1103 aa6.27□□□□□ -1.41
SNRNP27-204ENST00000487029 PARD6AQ9NPB6 346 aa6.27□□□□□ -1.41
SNRNP27-204ENST00000487029 CCDC9Q9Y3X0 531 aaKnown RBP6.27□□□□□ -1.41
SNRNP27-204ENST00000487029 A0A0G2JLL6 359 aaPredicted RBP6.26□□□□□ -1.41
SNRNP27-204ENST00000487029 HPXP02790 462 aa6.26□□□□□ -1.41
SNRNP27-204ENST00000487029 RAC2P15153 192 aa6.26□□□□□ -1.41
SNRNP27-204ENST00000487029 LETMD1Q6P1Q0 360 aa6.26□□□□□ -1.41
SNRNP27-204ENST00000487029 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.26□□□□□ -1.41
SNRNP27-204ENST00000487029 TXNDC2Q86VQ3 553 aa6.26□□□□□ -1.41
SNRNP27-204ENST00000487029 CCDC120Q96HB5 630 aa6.26□□□□□ -1.41
SNRNP27-204ENST00000487029 RNF32Q9H0A6 362 aa6.26□□□□□ -1.41
SNRNP27-204ENST00000487029 TMEM59LQ9UK28 342 aa6.26□□□□□ -1.41
SNRNP27-204ENST00000487029 CAP2P40123 477 aa6.25□□□□□ -1.41
SNRNP27-204ENST00000487029 TMCO4Q5TGY1 634 aa6.25□□□□□ -1.41
SNRNP27-204ENST00000487029 TMC7Q7Z402 723 aa6.25□□□□□ -1.41
SNRNP27-204ENST00000487029 XAGE3Q8WTP9 111 aa6.25□□□□□ -1.41
SNRNP27-204ENST00000487029 PLPPR2Q96GM1 343 aa6.25□□□□□ -1.41
SNRNP27-204ENST00000487029 C19orf44Q9H6X5 657 aa6.25□□□□□ -1.41
SNRNP27-204ENST00000487029 MYOCOSA0A1B0GUC4 107 aa6.24□□□□□ -1.41
SNRNP27-204ENST00000487029 FOXD2O60548 495 aaPredicted RBP6.24□□□□□ -1.41
SNRNP27-204ENST00000487029 SRFP11831 508 aa6.24□□□□□ -1.41
SNRNP27-204ENST00000487029 BMP7P18075 431 aa6.24□□□□□ -1.41
SNRNP27-204ENST00000487029 TIGD5Q53EQ6 642 aa6.24□□□□□ -1.41
SNRNP27-204ENST00000487029 MFSD2AQ8NA29 543 aa6.24□□□□□ -1.41
SNRNP27-204ENST00000487029 WNT10AQ9GZT5 417 aa6.24□□□□□ -1.41
SNRNP27-204ENST00000487029 MCOLN1Q9GZU1 580 aa6.24□□□□□ -1.41
SNRNP27-204ENST00000487029 PNMA6FA0A0J9YX94 578 aa6.23□□□□□ -1.41
SNRNP27-204ENST00000487029 CELA3AP09093 270 aa6.23□□□□□ -1.41
SNRNP27-204ENST00000487029 KRTAP10-2P60368 255 aa6.23□□□□□ -1.41
SNRNP27-204ENST00000487029 DSC3Q14574 896 aa6.23□□□□□ -1.41
SNRNP27-204ENST00000487029 PRAMEF13Q5VWM6 474 aa6.23□□□□□ -1.41
SNRNP27-204ENST00000487029 CDH24Q86UP0 819 aa6.23□□□□□ -1.41
SNRNP27-204ENST00000487029 OSBPL7Q9BZF2 842 aa6.23□□□□□ -1.41
SNRNP27-204ENST00000487029 SAMM50Q9Y512 469 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms