RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 LEKR1Q6ZMV7 388 aa14.08□□□□□ -0.16
HSPG2-211ENST00000486901 SDR42E1Q8WUS8 393 aa14.08□□□□□ -0.16
HSPG2-211ENST00000486901 LY9Q9HBG7 655 aa14.08□□□□□ -0.16
HSPG2-211ENST00000486901 KCND1Q9NSA2 647 aa14.08□□□□□ -0.16
HSPG2-211ENST00000486901 RRP15Q9Y3B9 282 aaKnown RBP14.08□□□□□ -0.16
HSPG2-211ENST00000486901 LTN1O94822 1766 aa14.08□□□□□ -0.16
HSPG2-211ENST00000486901 UBR1Q8IWV7 1749 aa14.08□□□□□ -0.16
HSPG2-211ENST00000486901 TULP2O00295 520 aa14.08□□□□□ -0.16
HSPG2-211ENST00000486901 NTRK3Q16288 839 aa14.08□□□□□ -0.16
HSPG2-211ENST00000486901 RABGGTAQ92696 567 aa14.08□□□□□ -0.16
HSPG2-211ENST00000486901 RASSF4Q9H2L5 321 aa14.08□□□□□ -0.16
HSPG2-211ENST00000486901 FAM170AA1A519 330 aa14.07□□□□□ -0.16
HSPG2-211ENST00000486901 HLFQ16534 295 aa14.07□□□□□ -0.16
HSPG2-211ENST00000486901 SRGAP1Q7Z6B7 1085 aa14.07□□□□□ -0.16
HSPG2-211ENST00000486901 NUTM2AQ8IVF1 878 aaPredicted RBP14.07□□□□□ -0.16
HSPG2-211ENST00000486901 IGDCC4Q8TDY8 1250 aa14.07□□□□□ -0.16
HSPG2-211ENST00000486901 DCAF5Q96JK2 942 aa14.07□□□□□ -0.16
HSPG2-211ENST00000486901 ABCF2Q9UG63 623 aa14.07□□□□□ -0.16
HSPG2-211ENST00000486901 WTIPA6NIX2 430 aaPredicted RBP14.07□□□□□ -0.16
HSPG2-211ENST00000486901 NUTM2BA6NNL0 878 aaPredicted RBP14.07□□□□□ -0.16
HSPG2-211ENST00000486901 NUTM2EB1AL46 878 aaPredicted RBP14.07□□□□□ -0.16
HSPG2-211ENST00000486901 PDE6AP16499 860 aa14.07□□□□□ -0.16
HSPG2-211ENST00000486901 LRRIQ3A6PVS8 624 aaPredicted RBP14.07□□□□□ -0.16
HSPG2-211ENST00000486901 PPP6R2O75170 966 aa14.07□□□□□ -0.16
HSPG2-211ENST00000486901 CDKL5O76039 1030 aa14.07□□□□□ -0.16
HSPG2-211ENST00000486901 MDM2Q00987 491 aaPredicted RBP14.07□□□□□ -0.16
HSPG2-211ENST00000486901 EVX2Q03828 476 aa14.07□□□□□ -0.16
HSPG2-211ENST00000486901 TBX2Q13207 712 aaPredicted RBP14.07□□□□□ -0.16
HSPG2-211ENST00000486901 EPB41L4AQ9HCS5 686 aaPredicted RBP14.07□□□□□ -0.16
HSPG2-211ENST00000486901 FBXO2Q9UK22 296 aaPredicted RBP14.07□□□□□ -0.16
HSPG2-211ENST00000486901 TBC1D2BQ9UPU7 963 aa14.07□□□□□ -0.16
HSPG2-211ENST00000486901 LAMA4Q16363 1823 aa14.06□□□□□ -0.16
HSPG2-211ENST00000486901 IBSPP21815 317 aaPredicted RBP14.06□□□□□ -0.16
HSPG2-211ENST00000486901 DHX8Q14562 1220 aaKnown RBP14.06□□□□□ -0.16
HSPG2-211ENST00000486901 RTN1Q16799 776 aa14.06□□□□□ -0.16
HSPG2-211ENST00000486901 RRAGBQ5VZM2 374 aa14.06□□□□□ -0.16
HSPG2-211ENST00000486901 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.06□□□□□ -0.161e-12■■■■■ 28.4
HSPG2-211ENST00000486901 EHD4Q9H223 541 aa14.06□□□□□ -0.16
HSPG2-211ENST00000486901 CTAGE9A4FU28 777 aa14.06□□□□□ -0.16
HSPG2-211ENST00000486901 HSP90B2PQ58FF3 399 aa14.06□□□□□ -0.16
HSPG2-211ENST00000486901 BEND6Q5SZJ8 279 aaPredicted RBP14.06□□□□□ -0.16
HSPG2-211ENST00000486901 SYMPKQ92797 1274 aaKnown RBP14.06□□□□□ -0.16
HSPG2-211ENST00000486901 SYNRGQ9UMZ2 1314 aa14.06□□□□□ -0.16
HSPG2-211ENST00000486901 MEGF6O75095 1541 aa14.06□□□□□ -0.16
HSPG2-211ENST00000486901 TRIM49BA6NDI0 452 aa14.06□□□□□ -0.16
HSPG2-211ENST00000486901 ADD2P35612 726 aa14.06□□□□□ -0.16
HSPG2-211ENST00000486901 TRIM22Q8IYM9 498 aa14.06□□□□□ -0.16
HSPG2-211ENST00000486901 RASSF8Q8NHQ8 419 aa14.06□□□□□ -0.16
HSPG2-211ENST00000486901 JAG2Q9Y219 1238 aa14.06□□□□□ -0.16
HSPG2-211ENST00000486901 CHD2O14647 1828 aaKnown RBP14.05□□□□□ -0.16
HSPG2-211ENST00000486901 TPM1P09493 284 aa14.05□□□□□ -0.16
HSPG2-211ENST00000486901 ZNF18P17022 549 aa14.05□□□□□ -0.16
HSPG2-211ENST00000486901 ERVK-24P63145 666 aa14.05□□□□□ -0.16
HSPG2-211ENST00000486901 CASP8Q14790 479 aa14.05□□□□□ -0.16
HSPG2-211ENST00000486901 NR1I3Q14994 352 aa14.05□□□□□ -0.16
HSPG2-211ENST00000486901 DNAJC10Q8IXB1 793 aa14.05□□□□□ -0.16
HSPG2-211ENST00000486901 FAM204AQ9H8W3 233 aa14.05□□□□□ -0.16
HSPG2-211ENST00000486901 CDC23Q9UJX2 597 aa14.05□□□□□ -0.16
HSPG2-211ENST00000486901 V9GY48 417 aaPredicted RBP14.05□□□□□ -0.16
HSPG2-211ENST00000486901 ZNF185O15231 689 aa14.05□□□□□ -0.16
HSPG2-211ENST00000486901 GYPCP04921 128 aa14.05□□□□□ -0.16
HSPG2-211ENST00000486901 CTAGE15A4D2H0 777 aa14.04□□□□□ -0.16
HSPG2-211ENST00000486901 ADAMTS3O15072 1205 aa14.04□□□□□ -0.16
HSPG2-211ENST00000486901 ZPR1O75312 459 aa14.04□□□□□ -0.16
HSPG2-211ENST00000486901 CTAGE8P0CG41 777 aa14.04□□□□□ -0.16
HSPG2-211ENST00000486901 VEGFAP15692 232 aaPredicted RBP14.04□□□□□ -0.16
HSPG2-211ENST00000486901 KRT9P35527 623 aa14.04□□□□□ -0.16
HSPG2-211ENST00000486901 CTAGE6Q86UF2 777 aa14.04□□□□□ -0.16
HSPG2-211ENST00000486901 CTAGE4Q8IX94 777 aa14.04□□□□□ -0.16
HSPG2-211ENST00000486901 IFNL3Q8IZI9 196 aa14.04□□□□□ -0.16
HSPG2-211ENST00000486901 AKAP2Q9Y2D5 859 aa14.04□□□□□ -0.16
HSPG2-211ENST00000486901 GDAQ9Y2T3 454 aa14.04□□□□□ -0.16
HSPG2-211ENST00000486901 KDM3BQ7LBC6 1761 aa14.04□□□□□ -0.16
HSPG2-211ENST00000486901 MMP1P03956 469 aa14.04□□□□□ -0.16
HSPG2-211ENST00000486901 MORC3Q14149 939 aa14.04□□□□□ -0.16
HSPG2-211ENST00000486901 WTAPQ15007 396 aa14.04□□□□□ -0.16
HSPG2-211ENST00000486901 MFSD6Q6ZSS7 791 aa14.04□□□□□ -0.16
HSPG2-211ENST00000486901 SMARCAL1Q9NZC9 954 aa14.04□□□□□ -0.16
HSPG2-211ENST00000486901 SLC4A4Q9Y6R1 1079 aa14.04□□□□□ -0.16
HSPG2-211ENST00000486901 ACTN2P35609 894 aa14.04□□□□□ -0.16
HSPG2-211ENST00000486901 TCIRG1Q13488 830 aa14.04□□□□□ -0.16
HSPG2-211ENST00000486901 E2F4Q16254 413 aa14.04□□□□□ -0.16
HSPG2-211ENST00000486901 DHX37Q8IY37 1157 aaKnown RBP14.04□□□□□ -0.16
HSPG2-211ENST00000486901 LCORLQ8N3X6 602 aa14.04□□□□□ -0.16
HSPG2-211ENST00000486901 MACROD2A1Z1Q3 448 aa14.03□□□□□ -0.16
HSPG2-211ENST00000486901 CCDC151A5D8V7 595 aa14.03□□□□□ -0.16
HSPG2-211ENST00000486901 ADAMTS2O95450 1211 aa14.03□□□□□ -0.16
HSPG2-211ENST00000486901 PTPREP23469 700 aa14.03□□□□□ -0.16
HSPG2-211ENST00000486901 MCM7P33993 719 aa14.03□□□□□ -0.16
HSPG2-211ENST00000486901 HDXQ7Z353 690 aa14.03□□□□□ -0.16
HSPG2-211ENST00000486901 MLKLQ8NB16 471 aa14.03□□□□□ -0.16
HSPG2-211ENST00000486901 ENOX1Q8TC92 643 aaKnown RBP14.03□□□□□ -0.16
HSPG2-211ENST00000486901 PCMTD1Q96MG8 357 aaPredicted RBP14.03□□□□□ -0.16
HSPG2-211ENST00000486901 TRMT112Q9UI30 125 aaKnown RBP14.03□□□□□ -0.16
HSPG2-211ENST00000486901 ASAP1Q9ULH1 1129 aa14.03□□□□□ -0.16
HSPG2-211ENST00000486901 DUSP10Q9Y6W6 482 aa14.03□□□□□ -0.16
HSPG2-211ENST00000486901 TULP1O00294 542 aaPredicted RBP14.03□□□□□ -0.16
HSPG2-211ENST00000486901 ACTN4O43707 911 aaKnown RBP14.03□□□□□ -0.16
HSPG2-211ENST00000486901 ZFYP08048 801 aaPredicted RBP14.03□□□□□ -0.16
HSPG2-211ENST00000486901 KCNJ6P48051 423 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms