RNA–Protein interactions for RNA: ENST00000486720.1

APH1A-208, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 2

Gene APH1A, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-208ENST00000486720 ELP3Q9H9T3 547 aa17.4■□□□□ 0.38
APH1A-208ENST00000486720 RBM8AQ9Y5S9 174 aaKnown RBP17.4■□□□□ 0.38
APH1A-208ENST00000486720 OTOFQ9HC10 1997 aa17.39■□□□□ 0.37
APH1A-208ENST00000486720 SPDYE5A6NIY4 337 aa17.39■□□□□ 0.37
APH1A-208ENST00000486720 SMIM22K7EJ46 135 aa17.39■□□□□ 0.37
APH1A-208ENST00000486720 ZBTB48P10074 688 aaPredicted RBP17.39■□□□□ 0.37
APH1A-208ENST00000486720 HAND2P61296 217 aa17.39■□□□□ 0.37
APH1A-208ENST00000486720 PPATQ06203 517 aa17.39■□□□□ 0.37
APH1A-208ENST00000486720 AKNAD1Q5T1N1 836 aa17.39■□□□□ 0.37
APH1A-208ENST00000486720 MFSD6Q6ZSS7 791 aa17.39■□□□□ 0.37
APH1A-208ENST00000486720 STK11IPQ8N1F8 1099 aa17.39■□□□□ 0.37
APH1A-208ENST00000486720 STAG1Q8WVM7 1258 aa17.39■□□□□ 0.37
APH1A-208ENST00000486720 ZBTB21Q9ULJ3 1066 aa17.39■□□□□ 0.37
APH1A-208ENST00000486720 MPHOSPH10O00566 681 aaKnown RBP17.38■□□□□ 0.37
APH1A-208ENST00000486720 ORC4O43929 436 aa17.38■□□□□ 0.37
APH1A-208ENST00000486720 GDF11O95390 407 aa17.38■□□□□ 0.37
APH1A-208ENST00000486720 SLC10A3P09131 477 aa17.38■□□□□ 0.37
APH1A-208ENST00000486720 FGRP09769 529 aa17.38■□□□□ 0.37
APH1A-208ENST00000486720 RRP1BQ14684 758 aaKnown RBP17.38■□□□□ 0.37
APH1A-208ENST00000486720 RNF20Q5VTR2 975 aa17.38■□□□□ 0.37
APH1A-208ENST00000486720 TMEM179Q6ZVK1 233 aa17.38■□□□□ 0.37
APH1A-208ENST00000486720 RASAL3Q86YV0 1011 aa17.38■□□□□ 0.37
APH1A-208ENST00000486720 AS3MTQ9HBK9 375 aa17.38■□□□□ 0.37
APH1A-208ENST00000486720 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.38■□□□□ 0.37
APH1A-208ENST00000486720 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.38■□□□□ 0.37
APH1A-208ENST00000486720 DOCK1Q14185 1865 aa17.37■□□□□ 0.37
APH1A-208ENST00000486720 USP17L5A8MUK1 530 aa17.37■□□□□ 0.37
APH1A-208ENST00000486720 GH2P01242 217 aa17.37■□□□□ 0.37
APH1A-208ENST00000486720 PTPRAP18433 802 aa17.37■□□□□ 0.37
APH1A-208ENST00000486720 RASA1P20936 1047 aa17.37■□□□□ 0.37
APH1A-208ENST00000486720 HTRA3P83110 453 aa17.37■□□□□ 0.37
APH1A-208ENST00000486720 NOGQ13253 232 aa17.37■□□□□ 0.37
APH1A-208ENST00000486720 PPIL2Q13356 520 aa17.37■□□□□ 0.37
APH1A-208ENST00000486720 SPRYD7Q5W111 196 aa17.37■□□□□ 0.37
APH1A-208ENST00000486720 OPTNQ96CV9 577 aa17.37■□□□□ 0.37
APH1A-208ENST00000486720 WNK4Q96J92 1243 aa17.37■□□□□ 0.37
APH1A-208ENST00000486720 CAPNS2Q96L46 248 aa17.37■□□□□ 0.37
APH1A-208ENST00000486720 CNNM2Q9H8M5 875 aa17.37■□□□□ 0.37
APH1A-208ENST00000486720 TOMM22Q9NS69 142 aa17.37■□□□□ 0.37
APH1A-208ENST00000486720 LAMA4Q16363 1823 aa17.36■□□□□ 0.37
APH1A-208ENST00000486720 PRDM1O75626 825 aa17.36■□□□□ 0.37
APH1A-208ENST00000486720 CYP21A2P08686 494 aa17.36■□□□□ 0.37
APH1A-208ENST00000486720 AKR1B1P15121 316 aa17.36■□□□□ 0.37
APH1A-208ENST00000486720 NECTIN1Q15223 517 aa17.36■□□□□ 0.37
APH1A-208ENST00000486720 CYP4F22Q6NT55 531 aa17.36■□□□□ 0.37
APH1A-208ENST00000486720 TBC1D10CQ8IV04 446 aa17.36■□□□□ 0.37
APH1A-208ENST00000486720 OTUD5Q96G74 571 aa17.36■□□□□ 0.37
APH1A-208ENST00000486720 KRT23Q9C075 422 aa17.36■□□□□ 0.37
APH1A-208ENST00000486720 NBPF3Q9H094 633 aa17.36■□□□□ 0.37
APH1A-208ENST00000486720 ZHX2Q9Y6X8 837 aa17.36■□□□□ 0.37
APH1A-208ENST00000486720 TSPY2A6NKD2 308 aa17.35■□□□□ 0.37
APH1A-208ENST00000486720 TSPY3P0CV98 308 aa17.35■□□□□ 0.37
APH1A-208ENST00000486720 TSPY8P0CW00 308 aa17.35■□□□□ 0.37
APH1A-208ENST00000486720 MCCP23508 829 aa17.35■□□□□ 0.37
APH1A-208ENST00000486720 TRDNQ13061 729 aa17.35■□□□□ 0.37
APH1A-208ENST00000486720 RAB3GAP1Q15042 981 aa17.35■□□□□ 0.37
APH1A-208ENST00000486720 PPP4R3BQ5MIZ7 849 aa17.35■□□□□ 0.37
APH1A-208ENST00000486720 CREB3L3Q68CJ9 461 aa17.35■□□□□ 0.37
APH1A-208ENST00000486720 ESR2Q92731 530 aa17.35■□□□□ 0.37
APH1A-208ENST00000486720 WDR33Q9C0J8 1336 aaKnown RBP17.35■□□□□ 0.37
APH1A-208ENST00000486720 FAM155AB1AL88 458 aaPredicted RBP17.34■□□□□ 0.37
APH1A-208ENST00000486720 CXCL11O14625 94 aa17.34■□□□□ 0.37
APH1A-208ENST00000486720 SLC27A2O14975 620 aa17.34■□□□□ 0.37
APH1A-208ENST00000486720 RANBP6O60518 1105 aaKnown RBP17.34■□□□□ 0.37
APH1A-208ENST00000486720 ZKSCAN1P17029 563 aaPredicted RBP17.34■□□□□ 0.37
APH1A-208ENST00000486720 JAG1P78504 1218 aa17.34■□□□□ 0.37
APH1A-208ENST00000486720 TFAP4Q01664 338 aa17.34■□□□□ 0.37
APH1A-208ENST00000486720 GRM1Q13255 1194 aa17.34■□□□□ 0.37
APH1A-208ENST00000486720 RRP12Q5JTH9 1297 aaKnown RBP17.34■□□□□ 0.37
APH1A-208ENST00000486720 REM2Q8IYK8 340 aaPredicted RBP17.34■□□□□ 0.37
APH1A-208ENST00000486720 ZNF280CQ8ND82 737 aa17.34■□□□□ 0.37
APH1A-208ENST00000486720 NEDD1Q8NHV4 660 aa17.34■□□□□ 0.37
APH1A-208ENST00000486720 PLIN4Q96Q06 1357 aa17.34■□□□□ 0.37
APH1A-208ENST00000486720 WDR18Q9BV38 432 aa17.34■□□□□ 0.37
APH1A-208ENST00000486720 KANSL2Q9H9L4 492 aa17.34■□□□□ 0.37
APH1A-208ENST00000486720 MYH8P13535 1937 aa17.33■□□□□ 0.37
APH1A-208ENST00000486720 MANSC4A6NHS7 340 aaPredicted RBP17.33■□□□□ 0.36
APH1A-208ENST00000486720 MAP2K2P36507 400 aa17.33■□□□□ 0.36
APH1A-208ENST00000486720 VEGFBP49765 207 aa17.33■□□□□ 0.36
APH1A-208ENST00000486720 GTF2A2P52657 109 aa17.33■□□□□ 0.36
APH1A-208ENST00000486720 ICA1Q05084 483 aa17.33■□□□□ 0.36
APH1A-208ENST00000486720 SNAPC2Q13487 334 aa17.33■□□□□ 0.36
APH1A-208ENST00000486720 SEPT2Q15019 361 aa17.33■□□□□ 0.36
APH1A-208ENST00000486720 C8orf34Q49A92 452 aa17.33■□□□□ 0.36
APH1A-208ENST00000486720 RALYLQ86SE5 291 aaKnown RBP17.33■□□□□ 0.36
APH1A-208ENST00000486720 CNKSR2Q8WXI2 1034 aa17.33■□□□□ 0.36
APH1A-208ENST00000486720 KCNH4Q9UQ05 1017 aa17.33■□□□□ 0.36
APH1A-208ENST00000486720 AFG3L2Q9Y4W6 797 aa17.33■□□□□ 0.36
APH1A-208ENST00000486720 ATAD5Q96QE3 1844 aa17.33■□□□□ 0.36
APH1A-208ENST00000486720 NEDD4P46934 1319 aa17.32■□□□□ 0.36
APH1A-208ENST00000486720 E7EWF7 191 aa17.32■□□□□ 0.36
APH1A-208ENST00000486720 IRF6O14896 467 aa17.32■□□□□ 0.36
APH1A-208ENST00000486720 GUCY1A2P33402 732 aa17.32■□□□□ 0.36
APH1A-208ENST00000486720 HSPA4P34932 840 aa17.32■□□□□ 0.36
APH1A-208ENST00000486720 GJA5P36382 358 aa17.32■□□□□ 0.36
APH1A-208ENST00000486720 INHBEP58166 350 aa17.32■□□□□ 0.36
APH1A-208ENST00000486720 SREBF2Q12772 1141 aa17.32■□□□□ 0.36
APH1A-208ENST00000486720 KRT32Q14532 448 aa17.32■□□□□ 0.36
APH1A-208ENST00000486720 SHROOM1Q2M3G4 852 aaPredicted RBP17.32■□□□□ 0.36
APH1A-208ENST00000486720 FAM47AQ5JRC9 791 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms