RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 GRIN3BO60391 1043 aa9.03□□□□□ -0.96
LTN1-206ENST00000486427 OXCT1P55809 520 aa9.03□□□□□ -0.96
LTN1-206ENST00000486427 PDE4BQ07343 736 aa9.03□□□□□ -0.96
LTN1-206ENST00000486427 ZNF394Q53GI3 561 aa9.03□□□□□ -0.96
LTN1-206ENST00000486427 REC114Q7Z4M0 266 aa9.03□□□□□ -0.96
LTN1-206ENST00000486427 KRTAP1-3Q8IUG1 177 aa9.03□□□□□ -0.96
LTN1-206ENST00000486427 MRPL41Q8IXM3 137 aaKnown RBP9.03□□□□□ -0.96
LTN1-206ENST00000486427 PLD6Q8N2A8 252 aaKnown RBP9.03□□□□□ -0.96
LTN1-206ENST00000486427 RIN3Q8TB24 985 aa9.03□□□□□ -0.96
LTN1-206ENST00000486427 XAGE3Q8WTP9 111 aa9.03□□□□□ -0.96
LTN1-206ENST00000486427 TMEM87BQ96K49 555 aa9.03□□□□□ -0.96
LTN1-206ENST00000486427 MIPEPQ99797 713 aa9.03□□□□□ -0.96
LTN1-206ENST00000486427 PCDHGB7Q9Y5F8 929 aa9.03□□□□□ -0.96
LTN1-206ENST00000486427 PLCG1P19174 1290 aa9.02□□□□□ -0.97
LTN1-206ENST00000486427 DIEXFQ68CQ4 756 aaKnown RBP9.02□□□□□ -0.97
LTN1-206ENST00000486427 NFXL1Q6ZNB6 911 aa9.02□□□□□ -0.97
LTN1-206ENST00000486427 MCATQ8IVS2 390 aaKnown RBP9.02□□□□□ -0.97
LTN1-206ENST00000486427 MFSD2AQ8NA29 543 aa9.02□□□□□ -0.97
LTN1-206ENST00000486427 LRRC3Q9BY71 257 aa9.02□□□□□ -0.97
LTN1-206ENST00000486427 ADAM30Q9UKF2 790 aa9.02□□□□□ -0.97
LTN1-206ENST00000486427 UPK3BL1B0FP48 263 aa9.01□□□□□ -0.97
LTN1-206ENST00000486427 UPK3BL2E5RIL1 263 aa9.01□□□□□ -0.97
LTN1-206ENST00000486427 SCAMP3O14828 347 aaKnown RBP9.01□□□□□ -0.97
LTN1-206ENST00000486427 PRNPP04156 253 aa9.01□□□□□ -0.97
LTN1-206ENST00000486427 SLC6A19Q695T7 634 aa9.01□□□□□ -0.97
LTN1-206ENST00000486427 USP48Q86UV5 1035 aa9.01□□□□□ -0.97
LTN1-206ENST00000486427 RNF34Q969K3 372 aa9.01□□□□□ -0.97
LTN1-206ENST00000486427 ZNF428Q96B54 188 aa9.01□□□□□ -0.97
LTN1-206ENST00000486427 UBP1Q9NZI7 540 aa9.01□□□□□ -0.97
LTN1-206ENST00000486427 PLAGL2Q9UPG8 496 aa9.01□□□□□ -0.97
LTN1-206ENST00000486427 PRR36Q9H6K5 1346 aa9.01□□□□□ -0.97
LTN1-206ENST00000486427 TMEM201Q5SNT2 666 aa9□□□□□ -0.97
LTN1-206ENST00000486427 LETMD1Q6P1Q0 360 aa9□□□□□ -0.97
LTN1-206ENST00000486427 NBPF11Q86T75 865 aa9□□□□□ -0.97
LTN1-206ENST00000486427 METTL16Q86W50 562 aaKnown RBP9□□□□□ -0.97
LTN1-206ENST00000486427 BRMS1Q9HCU9 246 aa9□□□□□ -0.97
LTN1-206ENST00000486427 BSDC1Q9NW68 430 aaPredicted RBP9□□□□□ -0.97
LTN1-206ENST00000486427 PODXL2Q9NZ53 605 aa9□□□□□ -0.97
LTN1-206ENST00000486427 REV1Q9UBZ9 1251 aa9□□□□□ -0.97
LTN1-206ENST00000486427 CCDC39Q9UFE4 941 aa9□□□□□ -0.97
LTN1-206ENST00000486427 DNAJA2O60884 412 aa8.99□□□□□ -0.97
LTN1-206ENST00000486427 HTR3BO95264 441 aa8.99□□□□□ -0.97
LTN1-206ENST00000486427 RACK1P63244 317 aaKnown RBP8.99□□□□□ -0.97
LTN1-206ENST00000486427 CWF19L2Q2TBE0 894 aaKnown RBP8.99□□□□□ -0.97
LTN1-206ENST00000486427 EAF1Q96JC9 268 aaPredicted RBP8.99□□□□□ -0.97
LTN1-206ENST00000486427 MKNK2Q9HBH9 465 aa8.99□□□□□ -0.97
LTN1-206ENST00000486427 GTF2IRD1Q9UHL9 959 aa8.99□□□□□ -0.97
LTN1-206ENST00000486427 ROBO2Q9HCK4 1378 aa8.99□□□□□ -0.97
LTN1-206ENST00000486427 IGF2BP3O00425 579 aaKnown RBP eCLIP8.98□□□□□ -0.97
LTN1-206ENST00000486427 CEACAM5P06731 702 aa8.98□□□□□ -0.97
LTN1-206ENST00000486427 ITIH2P19823 946 aa8.98□□□□□ -0.97
LTN1-206ENST00000486427 SEZ6Q53EL9 994 aa8.98□□□□□ -0.97
LTN1-206ENST00000486427 KIAA0825Q8IV33 1275 aa8.98□□□□□ -0.97
LTN1-206ENST00000486427 FAM13CQ8NE31 585 aa8.98□□□□□ -0.97
LTN1-206ENST00000486427 NETO1Q8TDF5 533 aa8.98□□□□□ -0.97
LTN1-206ENST00000486427 SPON2Q9BUD6 331 aa8.98□□□□□ -0.97
LTN1-206ENST00000486427 PRDM5Q9NQX1 630 aaPredicted RBP8.98□□□□□ -0.97
LTN1-206ENST00000486427 PRR33A8MZF0 331 aa8.97□□□□□ -0.97
LTN1-206ENST00000486427 CHURC1-FNTBB4DL54 471 aa8.97□□□□□ -0.97
LTN1-206ENST00000486427 WNT11O96014 354 aa8.97□□□□□ -0.97
LTN1-206ENST00000486427 HDLBPQ00341 1268 aaKnown RBP8.97□□□□□ -0.97
LTN1-206ENST00000486427 APOBRQ0VD83 1088 aa8.97□□□□□ -0.97
LTN1-206ENST00000486427 C9orf131Q5VYM1 1079 aa8.97□□□□□ -0.97
LTN1-206ENST00000486427 ARHGAP27Q6ZUM4 889 aa8.97□□□□□ -0.97
LTN1-206ENST00000486427 CDH24Q86UP0 819 aa8.97□□□□□ -0.97
LTN1-206ENST00000486427 VSIG10LQ86VR7 867 aa8.97□□□□□ -0.97
LTN1-206ENST00000486427 WFDC3Q8IUB2 231 aa8.97□□□□□ -0.97
LTN1-206ENST00000486427 NT5C1AQ9BXI3 368 aa8.97□□□□□ -0.97
LTN1-206ENST00000486427 DDX41Q9UJV9 622 aaKnown RBP8.97□□□□□ -0.97
LTN1-206ENST00000486427 TPX2Q9ULW0 747 aaKnown RBP8.97□□□□□ -0.97
LTN1-206ENST00000486427 PCDHB14Q9Y5E9 798 aa8.97□□□□□ -0.97
LTN1-206ENST00000486427 GP2P55259 537 aaKnown RBP8.96□□□□□ -0.98
LTN1-206ENST00000486427 DNAJB8Q8NHS0 232 aa8.96□□□□□ -0.98
LTN1-206ENST00000486427 BCL7CQ8WUZ0 217 aaPredicted RBP8.96□□□□□ -0.98
LTN1-206ENST00000486427 KLHL3Q9UH77 587 aa8.96□□□□□ -0.98
LTN1-206ENST00000486427 MAPK8IP1Q9UQF2 711 aa8.96□□□□□ -0.98
LTN1-206ENST00000486427 CLCQ05315 142 aa8.95□□□□□ -0.98
LTN1-206ENST00000486427 BNIP3Q12983 259 aa8.95□□□□□ -0.98
LTN1-206ENST00000486427 IFI16Q16666 785 aaKnown RBP8.95□□□□□ -0.98
LTN1-206ENST00000486427 NKPD1Q17RQ9 610 aa8.95□□□□□ -0.98
LTN1-206ENST00000486427 ZNF574Q6ZN55 896 aaPredicted RBP8.95□□□□□ -0.98
LTN1-206ENST00000486427 SPACA3Q8IXA5 215 aa8.95□□□□□ -0.98
LTN1-206ENST00000486427 PPP1R13LQ8WUF5 828 aa8.95□□□□□ -0.98
LTN1-206ENST00000486427 TNKS2Q9H2K2 1166 aa8.95□□□□□ -0.98
LTN1-206ENST00000486427 ANGEL1Q9UNK9 670 aaKnown RBP8.95□□□□□ -0.98
LTN1-206ENST00000486427 OAS3Q9Y6K5 1087 aaKnown RBP8.95□□□□□ -0.98
LTN1-206ENST00000486427 CD96P40200 585 aa8.94□□□□□ -0.98
LTN1-206ENST00000486427 SFRP5Q5T4F7 317 aa8.94□□□□□ -0.98
LTN1-206ENST00000486427 SPRED2Q7Z698 418 aa8.94□□□□□ -0.98
LTN1-206ENST00000486427 SLITRK4Q8IW52 837 aa8.94□□□□□ -0.98
LTN1-206ENST00000486427 CYB5D2Q8WUJ1 264 aa8.94□□□□□ -0.98
LTN1-206ENST00000486427 NKD1Q969G9 470 aa8.94□□□□□ -0.98
LTN1-206ENST00000486427 GNAT3A8MTJ3 354 aa8.93□□□□□ -0.98
LTN1-206ENST00000486427 ATE1O95260 518 aa8.93□□□□□ -0.98
LTN1-206ENST00000486427 YARSP54577 528 aaKnown RBP8.93□□□□□ -0.98
LTN1-206ENST00000486427 GK5Q6ZS86 529 aa8.93□□□□□ -0.98
LTN1-206ENST00000486427 NT5DC4Q86YG4 428 aa8.93□□□□□ -0.98
LTN1-206ENST00000486427 SLFN12Q8IYM2 578 aa8.93□□□□□ -0.98
LTN1-206ENST00000486427 FLCNQ8NFG4 579 aa8.93□□□□□ -0.98
LTN1-206ENST00000486427 EHMT1Q9H9B1 1298 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms