RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 EYA3Q99504 573 aa13.85□□□□□ -0.19
PKP4-213ENST00000486254 MYL10Q9BUA6 226 aa13.85□□□□□ -0.19
PKP4-213ENST00000486254 TMX4Q9H1E5 349 aaPredicted RBP13.85□□□□□ -0.19
PKP4-213ENST00000486254 MYH1P12882 1939 aa13.84□□□□□ -0.19
PKP4-213ENST00000486254 CYP2D7A0A087X1C5 515 aa13.84□□□□□ -0.19
PKP4-213ENST00000486254 NR1I2O75469 434 aa13.84□□□□□ -0.19
PKP4-213ENST00000486254 KIF5BP33176 963 aa13.84□□□□□ -0.19
PKP4-213ENST00000486254 ME1P48163 572 aa13.84□□□□□ -0.19
PKP4-213ENST00000486254 POTEHQ6S545 545 aa13.84□□□□□ -0.19
PKP4-213ENST00000486254 TMTC3Q6ZXV5 915 aa13.84□□□□□ -0.19
PKP4-213ENST00000486254 NOSTRINQ8IVI9 506 aa13.84□□□□□ -0.19
PKP4-213ENST00000486254 SH3RF3Q8TEJ3 882 aaPredicted RBP13.84□□□□□ -0.19
PKP4-213ENST00000486254 TRIM44Q96DX7 344 aaPredicted RBP13.84□□□□□ -0.19
PKP4-213ENST00000486254 ZKSCAN3Q9BRR0 538 aa13.84□□□□□ -0.19
PKP4-213ENST00000486254 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.84□□□□□ -0.19
PKP4-213ENST00000486254 PCDHA7Q9UN72 937 aa13.84□□□□□ -0.19
PKP4-213ENST00000486254 MYO3BQ8WXR4 1341 aa13.84□□□□□ -0.19
PKP4-213ENST00000486254 PLIN4Q96Q06 1357 aa13.84□□□□□ -0.19
PKP4-213ENST00000486254 C6orf229H3BNL8 230 aa13.83□□□□□ -0.19
PKP4-213ENST00000486254 KINO60870 393 aaKnown RBP13.83□□□□□ -0.19
PKP4-213ENST00000486254 BTDP43251 543 aa13.83□□□□□ -0.19
PKP4-213ENST00000486254 FOSBP53539 338 aa13.83□□□□□ -0.19
PKP4-213ENST00000486254 RHBDL3P58872 404 aa13.83□□□□□ -0.19
PKP4-213ENST00000486254 SNW1Q13573 536 aaKnown RBP13.83□□□□□ -0.19
PKP4-213ENST00000486254 DIXDC1Q155Q3 683 aa13.83□□□□□ -0.19
PKP4-213ENST00000486254 RILPL1Q5EBL4 403 aa13.83□□□□□ -0.19
PKP4-213ENST00000486254 CC2D2BQ6DHV5 1058 aa13.83□□□□□ -0.19
PKP4-213ENST00000486254 OTUD7BQ6GQQ9 843 aa13.83□□□□□ -0.19
PKP4-213ENST00000486254 CCAR1Q8IX12 1150 aaKnown RBP13.83□□□□□ -0.19
PKP4-213ENST00000486254 FAM200AQ8TCP9 573 aa13.83□□□□□ -0.19
PKP4-213ENST00000486254 MRIQ9BWK5 157 aa13.83□□□□□ -0.19
PKP4-213ENST00000486254 ZNF646O15015 1829 aaPredicted RBP13.83□□□□□ -0.2
PKP4-213ENST00000486254 TSPY2A6NKD2 308 aa13.83□□□□□ -0.2
PKP4-213ENST00000486254 CMA1P23946 247 aa13.83□□□□□ -0.2
PKP4-213ENST00000486254 GNAQP50148 359 aa13.83□□□□□ -0.2
PKP4-213ENST00000486254 AKAP17AQ02040 695 aaKnown RBP13.83□□□□□ -0.2
PKP4-213ENST00000486254 TYRO3Q06418 890 aa13.83□□□□□ -0.2
PKP4-213ENST00000486254 PTPAQ15257 358 aa13.83□□□□□ -0.2
PKP4-213ENST00000486254 GRIK5Q16478 980 aa13.83□□□□□ -0.2
PKP4-213ENST00000486254 GRIPAP1Q4V328 841 aa13.83□□□□□ -0.2
PKP4-213ENST00000486254 RCSD1Q6JBY9 416 aa13.83□□□□□ -0.2
PKP4-213ENST00000486254 C16orf86Q6ZW13 317 aa13.83□□□□□ -0.2
PKP4-213ENST00000486254 PODNQ7Z5L7 613 aa13.83□□□□□ -0.2
PKP4-213ENST00000486254 CCDC144CPQ8IYA2 1237 aa13.83□□□□□ -0.2
PKP4-213ENST00000486254 CTCFLQ8NI51 663 aaPredicted RBP13.83□□□□□ -0.2
PKP4-213ENST00000486254 AIFM3Q96NN9 605 aa13.83□□□□□ -0.2
PKP4-213ENST00000486254 FTOQ9C0B1 505 aaKnown RBP eCLIP13.83□□□□□ -0.2
PKP4-213ENST00000486254 ZC3H12CQ9C0D7 883 aaKnown RBP13.83□□□□□ -0.2
PKP4-213ENST00000486254 SNED1Q8TER0 1413 aa13.82□□□□□ -0.2
PKP4-213ENST00000486254 FLT1P17948 1338 aa13.82□□□□□ -0.2
PKP4-213ENST00000486254 CNTNAP5Q8WYK1 1306 aa13.82□□□□□ -0.2
PKP4-213ENST00000486254 POLR3DP05423 398 aaPredicted RBP13.82□□□□□ -0.2
PKP4-213ENST00000486254 USP17L8P0C7I0 530 aa13.82□□□□□ -0.2
PKP4-213ENST00000486254 NOVP48745 357 aa13.82□□□□□ -0.2
PKP4-213ENST00000486254 GNL2Q13823 731 aaKnown RBP13.82□□□□□ -0.2
PKP4-213ENST00000486254 SF3A1Q15459 793 aaKnown RBP13.82□□□□□ -0.2
PKP4-213ENST00000486254 AXDND1Q5T1B0 1012 aaPredicted RBP13.82□□□□□ -0.2
PKP4-213ENST00000486254 DPP8Q6V1X1 898 aaPredicted RBP13.82□□□□□ -0.2
PKP4-213ENST00000486254 SLC51AQ86UW1 340 aa13.82□□□□□ -0.2
PKP4-213ENST00000486254 ELOA2Q8IYF1 753 aaPredicted RBP13.82□□□□□ -0.2
PKP4-213ENST00000486254 FMR1NBQ8N0W7 255 aaPredicted RBP13.82□□□□□ -0.2
PKP4-213ENST00000486254 NUP133Q8WUM0 1156 aa13.82□□□□□ -0.2
PKP4-213ENST00000486254 TIGD1Q96MW7 591 aa13.82□□□□□ -0.2
PKP4-213ENST00000486254 GPR101Q96P66 508 aaPredicted RBP13.82□□□□□ -0.2
PKP4-213ENST00000486254 CAMKK2Q96RR4 588 aa13.82□□□□□ -0.2
PKP4-213ENST00000486254 CLIC4Q9Y696 253 aa13.82□□□□□ -0.2
PKP4-213ENST00000486254 SMIM22K7EJ46 135 aa13.81□□□□□ -0.2
PKP4-213ENST00000486254 PPFIA3O75145 1194 aa13.81□□□□□ -0.2
PKP4-213ENST00000486254 PRDM1O75626 825 aa13.81□□□□□ -0.2
PKP4-213ENST00000486254 BMP15O95972 392 aa13.81□□□□□ -0.2
PKP4-213ENST00000486254 CYP2D6P10635 497 aa13.81□□□□□ -0.2
PKP4-213ENST00000486254 HDLBPQ00341 1268 aaKnown RBP13.81□□□□□ -0.2
PKP4-213ENST00000486254 SLC15A2Q16348 729 aa13.81□□□□□ -0.2
PKP4-213ENST00000486254 HHIPL2Q6UWX4 724 aa13.81□□□□□ -0.2
PKP4-213ENST00000486254 DIS3L2Q8IYB7 885 aaKnown RBP13.81□□□□□ -0.2
PKP4-213ENST00000486254 TEX11Q8IYF3 940 aa13.81□□□□□ -0.2
PKP4-213ENST00000486254 FSIP1Q8NA03 581 aa13.81□□□□□ -0.2
PKP4-213ENST00000486254 CNKSR1Q969H4 720 aa13.81□□□□□ -0.2
PKP4-213ENST00000486254 GOLPH3LQ9H4A5 285 aa13.81□□□□□ -0.2
PKP4-213ENST00000486254 JAG2Q9Y219 1238 aa13.81□□□□□ -0.2
PKP4-213ENST00000486254 DAGLAQ9Y4D2 1042 aa13.81□□□□□ -0.2
PKP4-213ENST00000486254 MRVI1Q9Y6F6 885 aa13.81□□□□□ -0.2
PKP4-213ENST00000486254 CEBPZQ03701 1054 aaKnown RBP13.8□□□□□ -0.2
PKP4-213ENST00000486254 PKN1Q16512 942 aa13.8□□□□□ -0.2
PKP4-213ENST00000486254 RNF214Q8ND24 703 aa13.8□□□□□ -0.2
PKP4-213ENST00000486254 TGFBRAP1Q8WUH2 860 aa13.8□□□□□ -0.2
PKP4-213ENST00000486254 LZTS2Q9BRK4 669 aa13.8□□□□□ -0.2
PKP4-213ENST00000486254 PHF20Q9BVI0 1012 aa13.8□□□□□ -0.2
PKP4-213ENST00000486254 SH3GLB2Q9NR46 395 aa13.8□□□□□ -0.2
PKP4-213ENST00000486254 GJB4Q9NTQ9 266 aa13.8□□□□□ -0.2
PKP4-213ENST00000486254 CEP131Q9UPN4 1083 aa13.8□□□□□ -0.2
PKP4-213ENST00000486254 H0YIN7 160 aa13.79□□□□□ -0.2
PKP4-213ENST00000486254 CUTAO60888 179 aa13.79□□□□□ -0.2
PKP4-213ENST00000486254 NPM3O75607 178 aaKnown RBP13.79□□□□□ -0.2
PKP4-213ENST00000486254 RASA1P20936 1047 aa13.79□□□□□ -0.2
PKP4-213ENST00000486254 SMARCA1P28370 1054 aa13.79□□□□□ -0.2
PKP4-213ENST00000486254 GUCY1A2P33402 732 aa13.79□□□□□ -0.2
PKP4-213ENST00000486254 GRM4Q14833 912 aa13.79□□□□□ -0.2
PKP4-213ENST00000486254 SASS6Q6UVJ0 657 aa13.79□□□□□ -0.2
PKP4-213ENST00000486254 ZNF579Q8NAF0 562 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms